Gene: AT3G22880 (Arabidopsis thaliana)

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Gene Identifier
AT3G22880
Transcript Identifier
AT3G22880.1
Gene Type
Coding gene
Location
Chr3 : 8097948-8100740 : negative

Family Information

Homologous gene family
HOM04x5M001278
(176 genes in 39 species)
specific family
Orthologous gene family
ORTHO04x5M001342
(156 genes in 39 species)
specific family

Descriptions

Description
DNA repair (Rad51) family protein
Curated Summary
Expression of the AtDMC1 is restricted to pollen mother cells in anthers and to megaspore mother cells in ovules. Similar to meiosis-specific yeast DMC gene.
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Identifiers

Type Value
AliasARLIM15,ARABIDOPSIS HOMOLOG OF LILY MESSAGES INDUCED AT MEIOSIS 15,ATDMC1,ARABIDOPSIS THALIANA DISRUPTION OF MEIOTIC CONTROL 1
full_nameDISRUPTION OF MEIOTIC CONTROL 1
Dbxrefgene:2084557,UniProt:Q39009
symbolDMC1
tidAT3G22880.1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006259
IDA
Gene OntologyDNA metabolic process1 2
GO:0006259
IEA
InterProDNA metabolic process
GO:0006281
ISS
Gene OntologyDNA repair3
GO:0006281
IEA
InterProDNA repair
GO:0007131
ISS, IBA
Gene Ontologyreciprocal meiotic recombination3 4
GO:0007131
IEA
InterProreciprocal meiotic recombination
GO:0051026
IMP, IGI
Gene Ontologychiasma assembly5 6
GO:0051321
TAS
Gene Ontologymeiotic cell cycle7 8
GO:0000730
IBA
Gene OntologyDNA recombinase assembly4
GO:0042148
IBA
Gene Ontologystrand invasion4
GO:0006312
IBA
Gene Ontologymitotic recombination4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0005524
ISS
IEA
Gene OntologyATP binding3 9
GO:0005524
IEA
InterProATP binding
GO:0008094
ISS, IBA
Gene OntologyDNA-dependent ATPase activity3 4
GO:0008094
IEA
InterProDNA-dependent ATPase activity
GO:0000166
IEA
InterPronucleotide binding
GO:0000150
IBA
Gene Ontologyrecombinase activity4
GO:0000150
IEA
InterProrecombinase activity
GO:0003684
ISS
Gene Ontologydamaged DNA binding3
GO:0005515
IPI
Gene Ontologyprotein binding10 11
GO:0003697
IBA
Gene Ontologysingle-stranded DNA binding4
GO:0003690
IBA
Gene Ontologydouble-stranded DNA binding4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IDA
ISM
Gene Ontologynucleus12 13 14
GO:0005634
IEA
InterPronucleus
GO:0000794
IBA
Gene Ontologycondensed nuclear chromosome4

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR033925Rad51/DMC1/RadA
IPR013632DNA recombination and repair protein Rad51-like, C-terminal
IPR016467DNA recombination and repair protein, RecA-like
IPR020587DNA recombination and repair protein RecA, monomer-monomer interface
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domain
IPR003593AAA+ ATPase domain
IPR010995DNA repair Rad51/transcription factor NusA, alpha-helical
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR011940Meiotic recombination protein Dmc1

Mapman id Description
13.3.6.4.1Cell cycle organisation.mitosis and meiosis.meiotic recombination.DNA strand exchange.recombinase (DMC1)