Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ZM04G13840
(Zea mays)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Zea mays | Orthologous gene family | ZM04G13840 | 1 |  |
| Anchor point | ZM01G38590 ZM07G13560 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | ZM04G13840 | 1 | ||
| Tree-based ortholog | ZM04G13840 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Arabidopsis thaliana | Orthologous gene family | 1-to-1 | AT1G14900 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G14900 | 1 | ||
| Tree-based ortholog | 1-to-many | AT3G18035 AT1G48620 AT1G14900 | 3 | ||
| Brachypodium distachyon | Anchor point | many-to-many | BD3G36390 BD4G29846 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BD3G36390 | 1 | ||
| Tree-based ortholog | 1-to-1 | BD3G36390 | 1 | ||
| Carica papaya | Orthologous gene family | 1-to-1 | CP00116G00540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00116G00540 | 1 | ||
| Tree-based ortholog | 1-to-many | CP00116G00540 CP00844G00010 | 2 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR13G01370 | 1 | |
| Hordeum vulgare | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | HV139442G00010 | 1 | |
| Tree-based ortholog | 1-to-1 | HV139442G00010 | 1 | ||
| Musa acuminata | Orthologous gene family | 1-to-many | MA05G06070 MA06G04360 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MA05G06070 | 1 | ||
| Tree-based ortholog | 1-to-many | MA05G25090 MA07G12880 MA05G06070 ... | 4 | ||
| Oryza sativa ssp. indica | Anchor point | many-to-1 | OSINDICA_09G18230 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OSINDICA_05G46050 | 1 | ||
| Oryza sativa ssp. japonica | Anchor point | many-to-many | OS09G23730 OS08G33190 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G33190 | 1 | ||
| Tree-based ortholog | 1-to-1 | OS08G33190 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00033G01410 PP00072G01020 PP00003G01510 ... | 5 | |
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT17G12940 PT04G08750 | 2 | |
| Tree-based ortholog | 1-to-many | PT04G08750 PT17G12940 PT12G04850 ... | 6 | ||
| Setaria italica | Anchor point | many-to-1 | SI002G20570 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SI002G20570 | 1 | ||
| Tree-based ortholog | 1-to-many | SI002G20570 SI007G29600 | 2 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | SL05G051290 SL11G011160 | 2 | |
| Tree-based ortholog | 1-to-many | SL05G051290 SL11G011160 SL03G119130 ... | 4 | ||
| Sorghum bicolor | Orthologous gene family | 1-to-1 | SB07G020920 | 1 | |
| Anchor point | many-to-many | SB07G020920 SB02G024290 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SB07G020920 | 1 | ||
| Tree-based ortholog | 1-to-many | SB08G001660 SB07G020920 | 2 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | VV01G06210 VV09G01240 VV13G11900 | 3 | |
| Tree-based ortholog | 1-to-many | VV17G07000 VV13G11900 VV09G01240 ... | 4 |