Gene: SL05G051290 (Solanum lycopersicum)

Overview top

Gene Identifier
SL05G051290
Transcript Identifier
SL05G051290.1
Gene Type
Coding gene
Location
ch05 : 60728006-60729149 : negative

Family

Gene family
HOM03M001476
(52 genes in 13 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
High mobility group family (AHRD V1 *--- B9H3A3_POPTR)%3B contains Interpro domain(s) IPR017956 AT hook%2C DNA-binding%2C conserved site
Description (AnnoMine)
HMG-Y-related protein A

Identifiers

Identifier Name
pidSolyc05g051290.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0006334IEAInterPronucleosome assembly
GO:0034728IEAPLAZA Homologynucleosome organizationHOM03M001476

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0000786IEAInterPronucleosome
GO:0000785IEAInterProchromatin
GO:1990104IEAPLAZA HomologyDNA bending complexHOM03M001476

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR017956AT hook, DNA-binding motif
IPR000116High mobility group, HMG-I/HMG-Y
IPR005818Linker histone H1/H5, domain H15
IPR011991Winged helix-turn-helix DNA-binding domain
IPR020478AT hook-like

Mapman id Description
28.1.3DNA.synthesis/chromatin structure.histone
No SignalP domains detected for this gene.