Gene: PT12G04850 (Populus trichocarpa)

Overview top

Gene Identifier
PT12G04850
Transcript Identifier
PT12G04850.1
Gene Type
Coding gene
Location
Chr12 : 4535322-4538834 : negative

Family

Gene family
HOM03M001476
(52 genes in 13 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
HMG-Y-related protein
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.012G048500.1
idPAC:27050528

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006334IEAGenome Projectnucleosome assembly
GO:0034728IEAPLAZA Homologynucleosome organizationHOM03M001476

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000786IEAGenome Projectnucleosome
GO:0005634IEAGenome Projectnucleus
GO:1990104IEAPLAZA HomologyDNA bending complexHOM03M001476

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR017956AT hook, DNA-binding motif
IPR020478AT hook-like
IPR005818Linker histone H1/H5, domain H15
IPR011991Winged helix-turn-helix DNA-binding domain

Mapman id Description
28.1.3.1DNA.synthesis/chromatin structure.histone.H1
No SignalP domains detected for this gene.