Gene: CP00844G00010 (Carica papaya)

Overview top

Gene Identifier
CP00844G00010
Transcript Identifier
CP00844G00010.1
Gene Type
Coding gene
Location
supercontig_844 : 9463-10154 : negative

Family

Gene family
HOM03M001476
(52 genes in 13 species)
specific family

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Descriptions

Description (AnnoMine)
HMG-Y-related protein A
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidevm.TU.supercontig_844.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0006334IEAGenome Projectnucleosome assembly
GO:0009294ISOPLAZA Integrative OrthologyDNA mediated transformationAT1G48620
GO:0034728IEAPLAZA Homologynucleosome organizationHOM03M001476

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus
GO:0000785IEAGenome Projectchromatin
GO:0000786IEAGenome Projectnucleosome
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT1G48620
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT1G48620
GO:1990104IEAPLAZA HomologyDNA bending complexHOM03M001476

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000116High mobility group, HMG-I/HMG-Y
IPR017956AT hook, DNA-binding motif
IPR005818Linker histone H1/H5, domain H15
IPR020478AT hook-like
IPR011991Winged helix-turn-helix DNA-binding domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.