Brachypodium distachyon
Brachypodium distachyon is a wild annual grass species. The genome is relatively small (~300Mb), is located on 5 chromosomes and approximately 25000 coding genes have been annotated.
Publication:
Genome sequencing and analysis of the model grass Brachypodium distachyon. Nature 463, 763-768 (2010).
Info and Links
Source | MIPS 1.2 |
PLAZA identifier | bdi |
NCBI link | Brachypodium distachyon |
Mitochondrion | Not available | Chloroplast | EU325680 |
Toolbox
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Annotations
Page 1 of 1334, showing 20 records out of 26678 total, starting on record 1, ending on 20
Gene | Transcript | Start | Stop | Strand | Chr | Type | Gene family |
---|---|---|---|---|---|---|---|
BD0G00010 | BD0G00010.1 | 9098 | 10555 | + | scaffold_40 | coding | HOM03M001031 |
BD0G00020 | BD0G00020.1 | 3767 | 4654 | + | scaffold_38 | coding | HOM03M008126 |
BD0G00030 | BD0G00030.1 | 676 | 1289 | - | scaffold_68 | coding | HOM03M000073 |
BD0G00040 | BD0G00040.1 | 263 | 784 | - | scaffold_23 | coding | HOM03M000018 |
BD0G00050 | BD0G00050.1 | 3530 | 4703 | - | scaffold_23 | coding | HOM03M000018 |
BD0G00060 | BD0G00060.1 | 11794 | 15265 | - | scaffold_23 | coding | HOM03M000018 |
BD0G00070 | BD0G00070.1 | 4845 | 6422 | + | scaffold_7 | coding | HOM03M000006 |
BD0G00080 | BD0G00080.1 | 14912 | 16259 | - | scaffold_7 | coding | HOM03M004664 |
BD0G00090 | BD0G00090.1 | 16562 | 21336 | + | scaffold_7 | coding | HOM03M001309 |
BD0G00100 | BD0G00100.1 | 22668 | 25390 | - | scaffold_7 | coding | HOM03M000086 |
BD0G00110 | BD0G00110.1 | 16852 | 19914 | + | scaffold_14 | coding | HOM03M000018 |
BD0G00120 | BD0G00120.1 | 774 | 2915 | + | scaffold_98 | coding | HOM03M000855 |
BD0G00150 | BD0G00150.1 | 435 | 1640 | - | scaffold_26 | coding | HOM03M010042 |
BD0G00160 | BD0G00160.1 | 11499 | 12704 | - | scaffold_26 | coding | HOM03M010042 |
BD0G00170 | BD0G00170.1 | 12918 | 13220 | + | scaffold_26 | coding | orphan gene |
BD0G00180 | BD0G00180.1 | 1665 | 3541 | + | scaffold_19 | coding | HOM03M000630 |
BD0G00190 | BD0G00190.1 | 13360 | 16356 | + | scaffold_19 | coding | HOM03M000630 |
BD0G00200 | BD0G00200.1 | 7291 | 12894 | + | scaffold_16 | coding | HOM03M000164 |
BD0G00220 | BD0G00220.1 | 4309 | 5162 | + | scaffold_18 | coding | HOM03M001080 |
BD0G00240 | BD0G00240.1 | 17278 | 17331 | + | scaffold_18 | coding | orphan gene |