Gene: OS09G23730 (Oryza sativa ssp. japonica)

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Gene Identifier
OS09G23730
Transcript Identifier
OS09G23730.1
Gene Type
Coding gene
Location
9 : 14106521-14107240 : negative

Family

Gene family
HOM03M001476
(52 genes in 13 species)
specific family
Subfamily
ORTHO03M023754
(2 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
HMG-Y-related protein A, putative, expressed
Description (AnnoMine)
HMG-Y-related protein A

Identifiers

Identifier Name
transcript_idLOC_OS09G23730.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006334RCA, IEAGene Ontologynucleosome assemblyGR_REF:8030
GO:0006355RCA, IEAGene Ontologyregulation of transcription, DNA-dependentGR_REF:8030
GO:0051276RCAGene Ontologychromosome organizationGR_REF:8030
GO:0009294ISOPLAZA Integrative OrthologyDNA mediated transformationAT1G48620
GO:0034728IEAPLAZA Homologynucleosome organizationHOM03M001476

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677RCA, IEAGene OntologyDNA bindingGR_REF:8030

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634RCA, IEAGene OntologynucleusGR_REF:8030
GO:0000786IEAInterPronucleosome
GO:0000785IEAInterProchromatin
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT1G48620
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT1G48620
GO:1990104IEAPLAZA HomologyDNA bending complexHOM03M001476

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR020478AT hook-like
IPR005818Linker histone H1/H5, domain H15
IPR000116High mobility group, HMG-I/HMG-Y
IPR017956AT hook, DNA-binding motif
IPR011991Winged helix-turn-helix DNA-binding domain

Mapman id Description
28.1.3DNA.synthesis/chromatin structure.histone
No SignalP domains detected for this gene.