Physcomitrella patens
Physcomitrella patens has, like most mosses, a much simpler morphology then vascular plants, therefore this is an excellent model for studying developmental & physiological processes. It's genome is a great asset in comparative genomics as it can be used as an outgroup for the Angiosperms.
Publication:
Rensing, S.A. et al. The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants. Science 319, 64-9 (2008).
Info and Links
Source | JGI assembly release v1.1 and COSMOSS annotation v1.6 |
PLAZA identifier | ppa |
NCBI link | Physcomitrella patens |
Mitochondrion | AB251495 | Chloroplast | AP005672 |
Toolbox
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Annotations
Page 1 of 1624, showing 20 records out of 32472 total, starting on record 1, ending on 20
Gene | Transcript | Start | Stop | Strand | Chr | Type | Gene family |
---|---|---|---|---|---|---|---|
PP00001G00010 | PP00001G00010.1 | 7841 | 8333 | - | scaffold_1 | coding | orphan gene |
PP00001G00020 | PP00001G00020.1 | 23035 | 23220 | - | scaffold_1 | coding | orphan gene |
PP00001G00030 | PP00001G00030.1 | 24956 | 25552 | - | scaffold_1 | coding | HOM03M000124 |
PP00001G00040 | PP00001G00040.1 | 81181 | 82647 | - | scaffold_1 | coding | HOM03M000177 |
PP00001G00050 | PP00001G00050.1 | 101835 | 103054 | - | scaffold_1 | coding | HOM03M000124 |
PP00001G00060 | PP00001G00060.1 | 186516 | 187082 | - | scaffold_1 | coding | HOM03M000014 |
PP00001G00070 | PP00001G00070.1 | 188516 | 188689 | - | scaffold_1 | coding | orphan gene |
PP00001G00080 | PP00001G00080.1 | 196421 | 196624 | - | scaffold_1 | coding | orphan gene |
PP00001G00090 | PP00001G00090.1 | 201378 | 205343 | - | scaffold_1 | coding | HOM03M005894 |
PP00001G00100 | PP00001G00100.1 | 206159 | 206990 | - | scaffold_1 | coding | HOM03M005894 |
PP00001G00110 | PP00001G00110.1 | 268370 | 272786 | + | scaffold_1 | coding | HOM03M000267 |
PP00001G00120 | PP00001G00120.1 | 277854 | 279986 | + | scaffold_1 | coding | HOM03M005768 |
PP00001G00130 | PP00001G00130.1 | 302076 | 308711 | - | scaffold_1 | coding | HOM03M000080 |
PP00001G00140 | PP00001G00140.1 | 316123 | 317365 | - | scaffold_1 | coding | HOM03M011399 |
PP00001G00150 | PP00001G00150.1 | 318534 | 318725 | - | scaffold_1 | coding | orphan gene |
PP00001G00160 | PP00001G00160.1 | 354632 | 356082 | - | scaffold_1 | coding | HOM03M000971 |
PP00001G00170 | PP00001G00170.1 | 393154 | 396079 | + | scaffold_1 | coding | HOM03M007178 |
PP00001G00180 | PP00001G00180.1 | 398120 | 399320 | + | scaffold_1 | coding | orphan gene |
PP00001G00190 | PP00001G00190.1 | 400372 | 400735 | + | scaffold_1 | coding | orphan gene |
PP00001G00200 | PP00001G00200.1 | 401119 | 404303 | + | scaffold_1 | coding | HOM03M010381 |