Vitis vinifera
Vitis vinifera, the grapevine, has been used to produce wine for thousands of years. This was the fourth genome of a flowering plant produced, selected because of it's importance in food production. Also vitis lacks any recent genome doublings; it resembles a more ancestral state of the genome and revealed some major insights in the evolution of Angiosperms.
Publication:
The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla.Nature 449, 463-7 (2007).
Info and Links
Source | genescope v1 |
PLAZA identifier | vvi |
NCBI link | Vitis vinifera |
Mitochondrion | FM179380 | Chloroplast | DQ424856 |
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Annotations
Page 1 of 1333, showing 20 records out of 26644 total, starting on record 1, ending on 20
Gene | Transcript | Start | Stop | Strand | Chr | Type | Gene family |
---|---|---|---|---|---|---|---|
VV00G00010 | VV00G00010.1 | 8367 | 9078 | - | chr12_random | coding | orphan gene |
VV00G00020 | VV00G00020.1 | 39428 | 54833 | + | chr12_random | coding | HOM03M000258 |
VV00G00030 | VV00G00030.1 | 57346 | 59307 | - | chr12_random | coding | HOM03M000765 |
VV00G00040 | VV00G00040.1 | 94747 | 101494 | - | chr12_random | coding | HOM03M000574 |
VV00G00050 | VV00G00050.1 | 108773 | 119583 | - | chr12_random | coding | HOM03M005204 |
VV00G00060 | VV00G00060.1 | 145806 | 186383 | - | chr12_random | coding | HOM03M000122 |
VV00G00070 | VV00G00070.1 | 200956 | 208416 | - | chr12_random | coding | HOM03M000122 |
VV00G00080 | VV00G00080.1 | 256266 | 290997 | - | chr12_random | coding | HOM03M000315 |
VV00G00090 | VV00G00090.1 | 331940 | 335121 | - | chr12_random | coding | HOM03M000315 |
VV00G00100 | VV00G00100.1 | 348522 | 351256 | - | chr12_random | coding | HOM03M005945 |
VV00G00110 | VV00G00110.1 | 356531 | 368399 | - | chr12_random | coding | HOM03M001184 |
VV00G00120 | VV00G00120.1 | 369640 | 376314 | - | chr12_random | coding | HOM03M000211 |
VV00G00130 | VV00G00130.1 | 449279 | 455512 | + | chr12_random | coding | HOM03M003700 |
VV00G00140 | VV00G00140.1 | 465826 | 467195 | - | chr12_random | coding | orphan gene |
VV00G00150 | VV00G00150.1 | 485284 | 490880 | + | chr12_random | coding | HOM03M000058 |
VV00G00160 | VV00G00160.1 | 499075 | 505351 | + | chr12_random | coding | HOM03M000044 |
VV00G00170 | VV00G00170.1 | 510285 | 519810 | - | chr12_random | coding | HOM03M002683 |
VV00G00180 | VV00G00180.1 | 608719 | 609125 | + | chr12_random | coding | HOM03M002698 |
VV00G00190 | VV00G00190.1 | 610245 | 641062 | + | chr12_random | coding | HOM03M000059 |
VV00G00200 | VV00G00200.1 | 664507 | 680153 | - | chr12_random | coding | HOM03M000005 |