Gene: MA05G06070 (Musa acuminata)

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Gene Identifier
MA05G06070
Transcript Identifier
MA05G06070.1
Gene Type
Coding gene
Location
chr5 : 4387036-4388021 : negative

Family

Gene family
HOM03M001476
(52 genes in 13 species)
specific family
Subfamily
ORTHO03M006201
(6 genes in 5 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
CC_gene:His1.2,CC_gene:At2g30620,CC_functional_completeness:modules,PRODUCT:HMG-Y-related protein A,GO:0006334,GO:0005634,GO:0003677,GO:0000786,GO:0000785,CC_evidence_code:ISS,CC_status:in_progress,CC_evidence:automatic,CC_EC_number:no_EC_number
Description (AnnoMine)
HMG-Y-related protein A

Identifiers

Identifier Name
GeneNameGSMUA_Achr5G05890_001
pidGSMUA_Achr5P05890_001
idGSMUA_Achr5T05890_001
tidGSMUA_Achr5T05890_001

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0006334IEAInterPronucleosome assembly
GO:0034728IEAPLAZA Homologynucleosome organizationHOM03M001476

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0000786IEAInterPronucleosome
GO:0000785IEAInterProchromatin
GO:1990104IEAPLAZA HomologyDNA bending complexHOM03M001476

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000116High mobility group, HMG-I/HMG-Y
IPR005818Linker histone H1/H5, domain H15
IPR020478AT hook-like
IPR017956AT hook, DNA-binding motif
IPR011991Winged helix-turn-helix DNA-binding domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.