Gene: SL03G119130 (Solanum lycopersicum)

Overview top

Gene Identifier
SL03G119130
Transcript Identifier
SL03G119130.1
Gene Type
Coding gene
Location
ch03 : 61877274-61881578 : positive

Family

Gene family
HOM03M001476
(52 genes in 13 species)
specific family

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Descriptions

Description
Histone H1 (AHRD V1 *-*- Q41025_PEA)%3B contains Interpro domain(s) IPR005818 Histone H1/H5
Description (AnnoMine)
HMG-Y-related protein

Identifiers

Identifier Name
pidSolyc03g119130.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006334IEAInterPronucleosome assembly
GO:0009294ISOPLAZA Integrative OrthologyDNA mediated transformationAT1G48620
GO:0034728IEAPLAZA Homologynucleosome organizationHOM03M001476

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus
GO:0000786IEAInterPronucleosome
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT1G48620
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT1G48620
GO:1990104IEAPLAZA HomologyDNA bending complexHOM03M001476

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005818Linker histone H1/H5, domain H15
IPR017956AT hook, DNA-binding motif
IPR020478AT hook-like
IPR011991Winged helix-turn-helix DNA-binding domain

Mapman id Description
28.1.3DNA.synthesis/chromatin structure.histone
No SignalP domains detected for this gene.