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Integrative Orthology Viewer:
TC0010G06740
(Theobroma cacao)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Theobroma cacao | Orthologous gene family | TC0008G06170 TC0010G06740 | 2 |  |
| Anchor point | TC0005G05440 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | TC0010G06740 | 1 | ||
| Tree-based ortholog | TC0010G06740 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00034G00450 | 1 | |
| Tree-based ortholog | 1-to-1 | ATR_00034G00450 | 1 | ||
| Arabidopsis lyrata | Anchor point | 1-to-1 | AL4G25600 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL2G04260 | 1 | ||
| Tree-based ortholog | 1-to-many | AL4G25600 AL0G11430 AL2G04260 ... | 4 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G61560 | 1 | |
| Tree-based ortholog | 1-to-many | AT2G39200 AT1G61560 AT1G11310 | 3 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV6G13830 | 1 | |
| Tree-based ortholog | 1-to-many | BV6G13830 BV1G00850 BV0G32140 ... | 8 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR09G13970 | 1 | |
| Tree-based ortholog | 1-to-many | BR03G19690 BR03G19700 BR04G23300 ... | 9 | ||
| Capsella rubella | Anchor point | 1-to-1 | CRU_004G20550 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_002G03430 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_004G20550 CRU_001G10380 CRU_002G03430 ... | 4 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP00026G01590 | 1 | |
| Anchor point | 1-to-1 | CP00053G00570 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00435G00050 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00053G00570 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | CR08G00590 CR01G03670 | 2 | |
| Tree-based ortholog | 1-to-1 | CR01G03670 | 1 | ||
| Citrullus lanatus | Anchor point | 1-to-1 | CL05G22020 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL05G22020 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL05G22020 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00002G06930 | 1 | |
| Anchor point | 1-to-many | CS00270G00080 CS00014G01930 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00270G00080 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00270G00080 | 1 | ||
| Cucumis melo | Anchor point | 1-to-1 | CM00016G07840 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00016G07840 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00016G07840 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G30480 EG0009G18640 | 2 | |
| Anchor point | 1-to-many | EG0010G09740 EG0007G22250 EG0001G09410 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G08320 | 1 | ||
| Tree-based ortholog | 1-to-many | EG0010G09740 EG0007G22250 | 2 | ||
| Fragaria vesca | Anchor point | 1-to-many | FV6G48420 FV7G24180 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV0G51680 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV7G24180 | 1 | ||
| Glycine max | Orthologous gene family | many-to-many | GM01G36170 GM11G09270 GM16G21510 | 3 | |
| Anchor point | 1-to-many | GM16G26090 GM02G07110 GM11G15920 ... | 8 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM16G26090 | 1 | ||
| Tree-based ortholog | 1-to-many | GM16G26100 GM02G07110 GM10G35640 ... | 5 | ||
| Gossypium raimondii | Orthologous gene family | many-to-1 | GR02G11380 | 1 | |
| Anchor point | 1-to-many | GR11G24070 GR01G13080 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR11G24070 | 1 | ||
| Tree-based ortholog | 1-to-many | GR11G24070 GR12G00410 | 2 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G043970 | 1 | |
| Tree-based ortholog | 1-to-many | LJ6G026340 LJ1G043970 LJ1G044050 ... | 6 | ||
| Malus domestica | Anchor point | 1-to-1 | MD12G011170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G186970 MD00G016110 | 2 | ||
| Tree-based ortholog | 1-to-many | MD00G016110 MD00G186970 | 2 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME00271G00010 ME01895G00120 ME12004G00540 | 3 | |
| Anchor point | 1-to-many | ME06327G00400 ME12004G00540 ME03750G00790 ... | 4 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00271G00010 | 1 | ||
| Tree-based ortholog | 1-to-many | ME00271G00010 ME12004G00540 | 2 | ||
| Medicago truncatula | Anchor point | 1-to-many | MT2G093750 MT6G033330 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT6G033330 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT6G033330 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | OS06G29110 OS03G03700 | 2 | |
| Tree-based ortholog | 1-to-many | OS03G03700 OS06G29110 OS05G09050 ... | 12 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL13G00410 | 1 | |
| Tree-based ortholog | 1-to-1 | OL13G00410 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00210G00390 PP00403G00240 PP00024G00070 ... | 5 | |
| Tree-based ortholog | 1-to-many | PP00099G00630 PP00024G00070 PP00210G00390 ... | 11 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT02G00700 PT05G25430 PT07G06420 | 3 | |
| Anchor point | 1-to-many | PT08G04140 PT10G22050 PT16G08800 | 3 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT10G22050 PT08G04140 | 2 | ||
| Tree-based ortholog | 1-to-many | PT08G04140 PT10G22050 | 2 | ||
| Prunus persica | Anchor point | 1-to-many | PPE_002G20800 PPE_006G09660 PPE_006G24730 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G09670 | 1 | ||
| Tree-based ortholog | 1-to-1 | PPE_002G20800 | 1 | ||
| Ricinus communis | Anchor point | 1-to-many | RC30078G01440 RC28802G00010 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC28802G00010 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC28802G00010 | 1 | ||
| Solanum lycopersicum | Anchor point | 1-to-1 | SL11G069220 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL06G010030 | 1 | ||
| Tree-based ortholog | 1-to-many | SL03G095650 SL04G049090 | 2 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST06G010590 | 1 | |
| Tree-based ortholog | 1-to-many | ST03G021200 ST04G016840 | 2 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP2G03050 | 1 | |
| Tree-based ortholog | 1-to-many | TP4G21530 TP2G03050 TP1G09960 | 3 | ||
| Vitis vinifera | Anchor point | 1-to-many | VV08G02630 VV06G05150 VV13G03360 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV08G02630 | 1 | ||
| Tree-based ortholog | 1-to-many | VV13G03360 VV13G03350 | 2 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM01G02060 | 1 | |
| Tree-based ortholog | 1-to-many | ZM01G02060 ZM06G09690 ZM05G16400 ... | 13 |