Integrative Orthology Viewer: SL10G005320 (Solanum lycopersicum)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Solanum lycopersicum | Orthologous gene family | SL07G064280 SL10G005320 SL10G006400 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | SL10G005320 | 1 | ||
Tree-based ortholog | SL10G005320 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00062G00190 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00062G00190 | 1 | ||
Tree-based ortholog | 1-to-1 | ATR_00062G00190 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-many | AL7G14920 AL8G20120 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G11860 | 1 | ||
Tree-based ortholog | 1-to-many | AL1G11860 AL2G11200 | 2 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-many | AT4G27070 AT5G54810 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G28237 | 1 | ||
Tree-based ortholog | 1-to-1 | AT5G28237 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV0G68790 | 1 | |
Anchor point | N/A | BV0G14430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G14430 | 1 | ||
Tree-based ortholog | 1-to-1 | BV0G14430 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-many | BR03G49430 BR08G28780 BR09G09350 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR08G28770 | 1 | ||
Tree-based ortholog | 1-to-many | BR08G28770 BR09G09350 BR08G28780 | 3 | ||
Capsella rubella | Orthologous gene family | many-to-many | CRU_007G12980 CRU_008G14710 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G10650 | 1 | ||
Tree-based ortholog | 1-to-1 | CRU_001G10650 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00097G00460 | 1 | |
Anchor point | N/A | CP00198G00190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00198G00190 | 1 | ||
Tree-based ortholog | 1-to-1 | CP00198G00190 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR03G04490 | 1 | |
Tree-based ortholog | 1-to-1 | CR03G04490 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-many | CL03G04750 CL05G15790 | 2 | |
Anchor point | N/A | CL03G04750 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G04750 | 1 | ||
Tree-based ortholog | 1-to-1 | CL03G04750 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00215G00170 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00010G01370 | 1 | ||
Tree-based ortholog | 1-to-1 | CS00010G01370 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00032G00240 | 1 | |
Anchor point | N/A | CM00001G05800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00001G05810 | 1 | ||
Tree-based ortholog | 1-to-many | CM00001G05800 CM00001G05810 | 2 | ||
Eucalyptus grandis | Orthologous gene family | many-to-many | EG0004G10380 EG0006G29220 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | EG0004G10350 EG0004G10360 EG0004G10370 | 3 | ||
Tree-based ortholog | 1-to-many | EG0004G10380 EG0004G10370 EG0004G10360 ... | 4 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV3G24190 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G24190 | 1 | ||
Tree-based ortholog | 1-to-1 | FV2G26620 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM02G25300 GM11G00580 GM18G12090 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM11G00580 | 1 | ||
Tree-based ortholog | 1-to-1 | GM11G00580 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR13G16130 GR13G16140 | 2 | |
Anchor point | N/A | GR10G17800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GR13G16130 GR13G16140 | 2 | ||
Tree-based ortholog | 1-to-many | GR10G17800 GR10G17810 | 2 | ||
Lotus japonicus | Orthologous gene family | many-to-many | LJ1G001040 LJ6G009490 LJ6G009730 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ1G001040 | 1 | ||
Tree-based ortholog | 1-to-1 | LJ1G001040 | 1 | ||
Malus domestica | Orthologous gene family | many-to-1 | MD00G463080 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD00G463080 | 1 | ||
Tree-based ortholog | 1-to-1 | MD03G017710 | 1 | ||
Manihot esculenta | Orthologous gene family | many-to-many | ME03241G00640 ME03980G00040 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ME03241G00640 ME03980G00040 | 2 | ||
Tree-based ortholog | 1-to-many | ME12753G00120 ME00008G00020 | 2 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G049410 MT3G051120 MT5G005670 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT5G005670 | 1 | ||
Tree-based ortholog | 1-to-1 | MT5G005670 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS08G04180 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS08G04180 | 1 | ||
Tree-based ortholog | 1-to-1 | OS08G04180 | 1 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL07G02870 | 1 | |
Tree-based ortholog | 1-to-1 | OL07G02870 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00003G02010 PP00012G00570 | 2 | |
Tree-based ortholog | 1-to-many | PP00003G02010 PP00027G01070 PP00027G01020 ... | 4 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT01G42030 PT11G13600 | 2 | |
Anchor point | N/A | PT11G02490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT11G02490 | 1 | ||
Tree-based ortholog | 1-to-1 | PT11G02490 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_004G19910 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_004G19910 | 1 | ||
Tree-based ortholog | 1-to-1 | PPE_004G19910 | 1 | ||
Ricinus communis | Anchor point | N/A | RC29842G01270 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29842G01270 | 1 | ||
Tree-based ortholog | 1-to-1 | RC29842G01270 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-many | ST07G025920 ST10G005160 | 2 | |
Anchor point | N/A | ST10G006330 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G006330 | 1 | ||
Tree-based ortholog | 1-to-1 | ST10G006330 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-many | TP6G16750 TP7G25040 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G10210 | 1 | ||
Tree-based ortholog | 1-to-1 | TP1G10210 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0007G04340 | 1 | |
Anchor point | N/A | TC0006G20900 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G20900 | 1 | ||
Tree-based ortholog | 1-to-1 | TC0006G20900 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV19G00650 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV10G00430 | 1 | ||
Tree-based ortholog | 1-to-1 | VV10G00430 | 1 | ||
Zea mays | Orthologous gene family | many-to-many | ZM04G08030 ZM10G11240 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM04G08030 ZM10G11240 | 2 | ||
Tree-based ortholog | 1-to-many | ZM10G11240 ZM04G08030 | 2 |