Gene: AT4G27070 (Arabidopsis thaliana)

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Gene Identifier
AT4G27070
Transcript Identifier
AT4G27070.1
Gene Type
Coding gene
Location
4 : 13586564-13588619 : positive

Family

Gene family
HOM03D001803
(93 genes in 31 species)
specific family
Subfamily
ORTHO03D001466
(50 genes in 27 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description
tryptophan synthase beta-subunit 2
Curated Summary
Tryptophan synthase beta. Expressed at low levels in all tissues.
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Identifiers

Identifier Name
aliasTSB2
aliastryptophan synthase beta-subunit 2
uniprotP25269

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0000162TAS, IEAGene Ontologytryptophan biosynthetic process1
GO:0006568IEAInterProtryptophan metabolic process
GO:0006979ISOPLAZA Tree-based Orthologyresponse to oxidative stressAT5G54810
GO:0009684ISOPLAZA Tree-based Orthologyindoleacetic acid biosynthetic processAT5G54810
GO:0009651ISOPLAZA Tree-based Orthologyresponse to salt stressAT5G54810
GO:0046219IEAPLAZA Homologyindolalkylamine biosynthetic processHOM03D001803
GO:0006586IEAPLAZA Homologyindolalkylamine metabolic processHOM03D001803

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004834ISS, IMP, IEA, UniProttryptophan synthase activity1 2 3 4 5

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507IDA, ISMGene Ontologychloroplast1 2
GO:0009570IDAUniProtchloroplast stroma1 2 3 4
GO:0009941IDAUniProtchloroplast envelope1 2 3 4
GO:0005886ISOPLAZA Tree-based Orthologyplasma membraneAT5G54810

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023026Tryptophan synthase beta chain/beta chain-like
IPR006654Tryptophan synthase, beta chain
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily
IPR006653Tryptophan synthase, beta chain, conserved site

Mapman id Description
13.1.6.5.5amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase
No SignalP domains detected for this gene.