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Integrative Orthology Viewer:
SL03G120270
(Solanum lycopersicum)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Solanum lycopersicum | Orthologous gene family | SL03G120270 SL06G066730 SL12G043000 | 3 |  |
| Best-Hits-and-Inparalogs(BHI)family | SL03G120270 | 1 | ||
| Tree-based ortholog | SL03G120270 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00142G00040 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00142G00040 | 1 | ||
| Tree-based ortholog | 1-to-1 | ATR_00142G00040 | 1 | ||
| Arabidopsis lyrata | Orthologous gene family | many-to-many | AL1G47340 AL2G29800 AL3G16980 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL1G47340 | 1 | ||
| Tree-based ortholog | 1-to-many | AL2G29800 AL3G16980 AL1G47340 | 3 | ||
| Arabidopsis thaliana | Orthologous gene family | many-to-many | AT1G52360 AT1G79990 AT3G15980 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT1G52360 | 1 | ||
| Tree-based ortholog | 1-to-many | AT1G79990 AT3G15980 AT1G52360 | 3 | ||
| Beta vulgaris | Orthologous gene family | many-to-1 | BV9G16540 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV9G16540 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV9G16540 | 1 | ||
| Brassica rapa | Orthologous gene family | many-to-many | BR01G32920 BR03G47320 BR05G17310 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR05G17310 | 1 | ||
| Tree-based ortholog | 1-to-1 | BR03G34610 | 1 | ||
| Capsella rubella | Orthologous gene family | many-to-many | CRU_001G39430 CRU_002G26070 CRU_003G14950 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_001G39430 | 1 | ||
| Tree-based ortholog | 1-to-many | CRU_002G26070 CRU_003G14950 CRU_001G39430 | 3 | ||
| Carica papaya | Orthologous gene family | many-to-1 | CP02868G00010 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP02868G00010 | 1 | ||
| Tree-based ortholog | 1-to-many | CP04996G00010 CP02868G00010 | 2 | ||
| Chlamydomonas reinhardtii | Orthologous gene family | many-to-1 | CR02G11290 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR02G11290 | 1 | ||
| Tree-based ortholog | 1-to-many | CR07G00420 CR07G07570 CR06G07350 ... | 8 | ||
| Citrullus lanatus | Orthologous gene family | many-to-many | CL07G13190 CL09G01900 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL09G01900 | 1 | ||
| Tree-based ortholog | 1-to-1 | CL07G13190 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00258G00190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00258G00190 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00258G00190 | 1 | ||
| Cucumis melo | Orthologous gene family | many-to-many | CM00018G01840 CM00067G00040 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00067G00040 | 1 | ||
| Tree-based ortholog | 1-to-1 | CM00018G01840 | 1 | ||
| Eucalyptus grandis | Orthologous gene family | many-to-many | EG0006G25260 EG0010G25630 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0006G25260 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0010G25630 | 1 | ||
| Fragaria vesca | Orthologous gene family | many-to-many | FV1G00790 FV6G16540 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G16540 | 1 | ||
| Tree-based ortholog | 1-to-many | FV1G00790 FV6G16540 | 2 | ||
| Glycine max | Orthologous gene family | many-to-many | GM07G03890 GM08G22140 GM13G43680 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | GM13G43680 GM15G01680 | 2 | ||
| Tree-based ortholog | 1-to-1 | GM13G43691 | 1 | ||
| Gossypium raimondii | Orthologous gene family | many-to-many | GR02G05890 GR06G09900 GR09G13280 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR06G09900 | 1 | ||
| Tree-based ortholog | 1-to-many | GR11G07730 GR02G05890 GR06G09900 ... | 4 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ5G029480 | 1 | |
| Tree-based ortholog | 1-to-many | LJ3G047350 LJ5G029480 LJ2G011230 ... | 4 | ||
| Malus domestica | Orthologous gene family | many-to-many | MD01G007070 MD17G015640 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MD17G015640 | 1 | ||
| Tree-based ortholog | 1-to-many | MD02G004810 MD17G015640 MD01G007070 | 3 | ||
| Manihot esculenta | Orthologous gene family | many-to-many | ME02196G00200 ME02581G00050 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME02581G00050 | 1 | ||
| Tree-based ortholog | 1-to-many | ME02581G00050 ME02196G00200 | 2 | ||
| Medicago truncatula | Orthologous gene family | many-to-many | MT2G102277 MT4G006350 MT4G011950 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G102277 | 1 | ||
| Tree-based ortholog | 1-to-many | MT4G006350 MT2G102277 MT4G011950 | 3 | ||
| Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS02G11830 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS02G11830 | 1 | ||
| Tree-based ortholog | 1-to-many | OS06G05180 OS02G11840 | 2 | ||
| Ostreococcus lucimarinus | Orthologous gene family | many-to-1 | OL01G02500 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL01G02500 | 1 | ||
| Tree-based ortholog | 1-to-1 | OL01G02500 | 1 | ||
| Physcomitrella patens | Orthologous gene family | many-to-many | PP00061G00010 PP00079G00970 PP00243G00300 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00061G00010 PP00079G00970 PP00243G00300 | 3 | ||
| Tree-based ortholog | 1-to-many | PP00243G00300 PP00079G00970 PP00061G00010 | 3 | ||
| Populus trichocarpa | Orthologous gene family | many-to-many | PT01G17920 PT03G05630 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PT01G17920 PT03G05630 | 2 | ||
| Tree-based ortholog | 1-to-many | PT01G17920 PT03G05630 | 2 | ||
| Prunus persica | Orthologous gene family | many-to-many | PPE_003G05840 PPE_007G24720 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_003G05840 | 1 | ||
| Tree-based ortholog | 1-to-many | PPE_007G24720 PPE_003G05840 | 2 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29872G00170 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29872G00170 | 1 | ||
| Tree-based ortholog | 1-to-1 | RC29872G00170 | 1 | ||
| Solanum tuberosum | Orthologous gene family | many-to-many | ST03G036860 ST06G023220 ST12G021850 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST03G036860 | 1 | ||
| Tree-based ortholog | 1-to-1 | ST03G036860 | 1 | ||
| Thellungiella parvula | Orthologous gene family | many-to-many | TP1G38970 TP3G14330 TP5G35770 | 3 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP1G38970 | 1 | ||
| Tree-based ortholog | 1-to-many | TP5G35770 TP3G14330 TP1G38970 | 3 | ||
| Theobroma cacao | Orthologous gene family | many-to-1 | TC0006G08580 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0006G08580 | 1 | ||
| Tree-based ortholog | 1-to-1 | TC0006G08580 | 1 | ||
| Vitis vinifera | Orthologous gene family | many-to-many | VV09G05380 VV11G05430 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV09G05380 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV11G05430 | 1 | ||
| Zea mays | Orthologous gene family | many-to-many | ZM04G37650 ZM05G27650 ZM06G08440 ... | 5 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ZM05G27650 ZM04G37650 | 2 | ||
| Tree-based ortholog | 1-to-1 | ZM07G09520 | 1 |