Gene: ATR_00142G00040 (Amborella trichopoda)

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Gene Identifier
ATR_00142G00040
Transcript Identifier
ATR_00142G00040.1
Gene Type
Coding gene
Location
scaffold00142 : 18870-45410 : negative

Family

Gene family
HOM03D000291
(391 genes in 31 species)
specific family
Subfamily
ORTHO03D000714
(69 genes in 30 species)
specific family

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Descriptions

Description (AnnoMine)
Vegetative incompatibility protein HET-E-1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameevm_27.TU.AmTr_v1.0_scaffold00142.4
idevm_27.model.AmTr_v1.0_scaffold00142.4

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016192IEAInterProvesicle-mediated transport
GO:0006886IEAInterProintracellular protein transport
GO:0009987IEAPLAZA Homologycellular processHOM03D000291

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0005198IEAInterProstructural molecule activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0030117IEAInterPromembrane coat
GO:0032991IEAPLAZA Homologymacromolecular complexHOM03D000291
GO:0044424IEAPLAZA Homologyintracellular partHOM03D000291
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G52360 AT1G79990 AT3G15980

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain
IPR020472G-protein beta WD-40 repeat
IPR001680WD40 repeat
IPR017986WD40-repeat-containing domain
IPR006692Coatomer, WD associated region

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.