Gene: SL03G120270 (Solanum lycopersicum)

Overview top

Gene Identifier
SL03G120270
Transcript Identifier
SL03G120270.1
Gene Type
Coding gene
Location
ch03 : 62768790-62777096 : positive

Family

Gene family
HOM03D000291
(391 genes in 31 species)
specific family
Subfamily
ORTHO03D000714
(69 genes in 30 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description
Coatomer beta%26apos subunit (AHRD V1 ***- C5FJ65_NANOT)%3B contains Interpro domain(s) IPR016453 Coatomer%2C beta' subunit
Description (AnnoMine)
Vegetative incompatibility protein HET-E-1

Identifiers

Identifier Name
pidSolyc03g120270.2.1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016192IEAInterProvesicle-mediated transport
GO:0006886IEAInterProintracellular protein transport
GO:0009987IEAPLAZA Homologycellular processHOM03D000291

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005080IEAGenome Projectprotein kinase C binding
GO:0016286IEAGenome Projectsmall conductance calcium-activated potassium channel activity
GO:0005515IEAInterProprotein binding
GO:0005198IEAInterProstructural molecule activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0030117IEAGenome Projectmembrane coat
GO:0032991IEAPLAZA Homologymacromolecular complexHOM03D000291
GO:0044424IEAPLAZA Homologyintracellular partHOM03D000291

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015943WD40/YVTN repeat-like-containing domain
IPR001680WD40 repeat
IPR017986WD40-repeat-containing domain
IPR020472G-protein beta WD-40 repeat
IPR006692Coatomer, WD associated region

Mapman id Description
31.4cell.vesicle transport
No SignalP domains detected for this gene.