Integrative Orthology Viewer: PT02G16150 (Populus trichocarpa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Populus trichocarpa | Orthologous gene family | PT02G16150 PT14G08700 | 2 | |
Anchor point | PT03G12990 PT01G10170 PT14G08700 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | PT02G16150 PT14G08700 | 2 | ||
Tree-based ortholog | PT02G16150 PT14G08700 | 2 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00009G01330 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00009G01330 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL6G41340 | 1 | |
Anchor point | many-to-many | AL7G36340 AL6G41340 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL6G41340 | 1 | ||
Tree-based ortholog | many-to-1 | AL6G41340 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT4G00335 | 1 | |
Anchor point | many-to-many | AT4G00335 AT5G41350 AT4G23450 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT4G00335 | 1 | ||
Tree-based ortholog | many-to-1 | AT4G00335 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV1G06330 | 1 | |
Anchor point | many-to-many | BV1G06330 BV5G07280 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV1G06330 | 1 | ||
Tree-based ortholog | many-to-1 | BV1G06330 | 1 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR09G01890 | 1 | |
Anchor point | many-to-many | BR04G10540 BR09G01890 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR04G10540 | 1 | ||
Tree-based ortholog | many-to-1 | BR04G10540 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_006G35650 | 1 | |
Anchor point | many-to-1 | CRU_006G35650 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_006G35650 | 1 | ||
Tree-based ortholog | many-to-1 | CRU_006G35650 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00011G00320 | 1 | |
Anchor point | many-to-1 | CP00011G00320 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00011G00320 | 1 | ||
Tree-based ortholog | many-to-1 | CP00011G00320 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR08G03650 | 1 | |
Tree-based ortholog | many-to-1 | CR08G03650 | 1 | ||
Citrullus lanatus | Orthologous gene family | many-to-1 | CL05G01700 | 1 | |
Anchor point | many-to-many | CL01G02350 CL05G01700 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL05G01700 | 1 | ||
Tree-based ortholog | many-to-1 | CL05G01700 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00001G03330 | 1 | |
Anchor point | many-to-many | CS00009G01170 CS00001G03330 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00001G03330 | 1 | ||
Tree-based ortholog | many-to-1 | CS00001G03330 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00006G01790 | 1 | |
Anchor point | many-to-many | CM00006G01790 CM00005G06660 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00005G06660 | 1 | ||
Tree-based ortholog | many-to-1 | CM00006G01790 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0005G01090 | 1 | |
Anchor point | many-to-many | EG0005G05510 EG0005G01090 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0005G01090 | 1 | ||
Tree-based ortholog | many-to-1 | EG0005G01090 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV7G07590 | 1 | |
Anchor point | many-to-many | FV5G03180 FV7G07590 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV7G07590 | 1 | ||
Tree-based ortholog | many-to-1 | FV7G07590 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM07G07500 GM16G03890 | 2 | |
Anchor point | many-to-many | GM18G46990 GM05G37620 GM16G03890 ... | 6 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM16G03890 GM07G07500 | 2 | ||
Tree-based ortholog | many-to-many | GM09G39300 GM18G46990 GM16G03890 ... | 4 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G15980 GR07G10120 | 2 | |
Anchor point | many-to-many | GR04G21360 GR08G24810 GR01G15980 ... | 5 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR07G10120 | 1 | ||
Tree-based ortholog | many-to-many | GR01G15980 GR07G10120 | 2 | ||
Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ2G036130 | 1 | |
Tree-based ortholog | many-to-1 | LJ2G036130 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G069000 MD00G500210 | 2 | |
Anchor point | many-to-1 | MD14G012700 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G500210 MD00G069000 | 2 | ||
Tree-based ortholog | many-to-many | MD00G500210 MD00G069000 MD00G409760 | 3 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME03581G01580 | 1 | |
Anchor point | many-to-1 | ME03581G01580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME03581G01580 | 1 | ||
Tree-based ortholog | many-to-1 | ME03581G01580 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT8G030510 | 1 | |
Anchor point | many-to-many | MT8G030510 MT8G098665 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT8G030510 | 1 | ||
Tree-based ortholog | many-to-1 | MT8G030510 | 1 | ||
Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS11G18947 | 1 | |
Tree-based ortholog | many-to-many | OS11G18947 OS10G05230 | 2 | ||
Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OL20G02540 | 1 | |
Tree-based ortholog | many-to-1 | OL20G02540 | 1 | ||
Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PP00455G00030 PP00016G01170 | 2 | |
Tree-based ortholog | many-to-many | PP00455G00030 PP00016G01170 | 2 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_002G16870 | 1 | |
Anchor point | many-to-many | PPE_005G11220 PPE_002G16870 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_002G16870 | 1 | ||
Tree-based ortholog | many-to-1 | PPE_002G16870 | 1 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC30174G03090 | 1 | |
Anchor point | many-to-many | RC30190G04140 RC30174G03090 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC30174G03090 | 1 | ||
Tree-based ortholog | many-to-1 | RC30174G03090 | 1 | ||
Solanum lycopersicum | Orthologous gene family | many-to-1 | SL01G094840 | 1 | |
Anchor point | many-to-many | SL01G094840 SL08G081300 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL01G094840 | 1 | ||
Tree-based ortholog | many-to-1 | SL01G094840 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G032230 | 1 | |
Anchor point | many-to-many | ST08G029120 ST01G032230 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST01G032230 | 1 | ||
Tree-based ortholog | many-to-1 | ST01G032230 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP6G00400 | 1 | |
Anchor point | many-to-many | TP6G00400 TP7G21350 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G00400 | 1 | ||
Tree-based ortholog | many-to-1 | TP6G00400 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0001G35360 | 1 | |
Anchor point | many-to-many | TC0003G27770 TC0001G35360 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0001G35360 | 1 | ||
Tree-based ortholog | many-to-1 | TC0001G35360 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV15G05580 | 1 | |
Anchor point | many-to-1 | VV15G05580 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV15G05580 | 1 | ||
Tree-based ortholog | many-to-1 | VV15G05580 | 1 | ||
Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-many | ZM01G24160 ZM05G12130 | 2 | |
Tree-based ortholog | many-to-many | ZM05G12130 ZM01G24160 ZM05G44450 | 3 |