PLAZA 3.0 Dicots gene overview : BR09G01890

Gene: BR09G01890 (Brassica rapa)

Overview

Gene Identifier: BR09G01890
Transcript Identifier: BR09G01890.1
Gene Type: Coding gene
Location: A09 : 1028386-1028882 : negative

Family

Gene family: HOM03D000861
(166 genes in 31 species)
specific family
Subfamily: ORTHO03D009333
(28 genes in 24 species)
specific family
Duplication type: Block duplicate

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Descriptions

Description (AnnoMine): PHD and RING finger domain-containing protein 1

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
protein_id	Bra037333

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0005515	IEA	InterPro	protein binding
GO:0008270	IEA	InterPro	zinc ion binding

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR001841	Zinc finger, RING-type
IPR013083	Zinc finger, RING/FYVE/PHD-type

Mapman id	Description
29.5.11.4.2	protein.degradation.ubiquitin.E3.RING

No SignalP domains detected for this gene.