Gene: ST08G029120 (Solanum tuberosum)

Overview top

Gene Identifier
ST08G029120
Transcript Identifier
ST08G029120.1
Gene Type
Coding gene
Location
chr08 : 43617622-43619414 : positive

Family

Gene family
HOM03D000861
(166 genes in 31 species)
specific family
Subfamily
ORTHO03D005125
(34 genes in 29 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description
E3 ubiquitin-protein ligase At3g02290 (AHRD V1 *--- RING3_ARATH); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type
Description (AnnoMine)
H2 finger protein

Identifiers

Identifier Name
GeneNamegene:Sotub08g029120
pidSotub08g029120.1.1

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010729ISOPLAZA Integrative Orthologypositive regulation of hydrogen peroxide biosynthetic processAT4G23450
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidAT4G23450
GO:0009789ISOPLAZA Integrative Orthologypositive regulation of abscisic acid-activated signaling pathwayAT4G23450
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT4G23450

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT4G23450

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT5G41350
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT4G23450

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.