Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
PPE_006G33800
(Prunus persica)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Prunus persica | Orthologous gene family | PPE_006G17050 PPE_006G33800 | 2 |  |
| Best-Hits-and-Inparalogs(BHI)family | PPE_006G33800 | 1 | ||
| Tree-based ortholog | PPE_006G33800 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00057G01210 ATR_00057G01220 ATR_00057G01230 | 3 | |
| Anchor point | N/A | ATR_00057G01210 | 1 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | ATR_00057G01210 ATR_00057G01220 ATR_00057G01230 | 3 | ||
| Tree-based ortholog | 1-to-many | ATR_00057G01220 ATR_00057G01230 | 2 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL3G06450 | 1 | |
| Tree-based ortholog | 1-to-1 | AL3G06450 | 1 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT3G06350 | 1 | |
| Tree-based ortholog | 1-to-1 | AT3G06350 | 1 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV0G73300 | 1 | |
| Tree-based ortholog | 1-to-1 | BV0G73300 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BR03G30410 | 1 | |
| Tree-based ortholog | 1-to-many | BR02G34270 BR01G40310 BR03G30410 | 3 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_003G05560 | 1 | |
| Tree-based ortholog | 1-to-many | CRU_003G05560 CRU_003G05550 | 2 | ||
| Carica papaya | Anchor point | N/A | CP00016G00990 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00016G00990 | 1 | ||
| Tree-based ortholog | 1-to-1 | CP00016G00990 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR08G05930 | 1 | |
| Tree-based ortholog | 1-to-1 | CR08G05930 | 1 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL01G08150 | 1 | |
| Tree-based ortholog | 1-to-1 | CL02G01150 | 1 | ||
| Citrus sinensis | Orthologous gene family | many-to-1 | CS00001G08450 | 1 | |
| Anchor point | N/A | CS00001G08450 CS00344G00120 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00011G02410 | 1 | ||
| Tree-based ortholog | 1-to-1 | CS00011G02410 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00007G04770 | 1 | |
| Tree-based ortholog | 1-to-1 | CM00045G02580 | 1 | ||
| Eucalyptus grandis | Anchor point | N/A | EG0008G35880 EG0002G14270 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0008G35890 | 1 | ||
| Tree-based ortholog | 1-to-1 | EG0008G35890 | 1 | ||
| Fragaria vesca | Anchor point | N/A | FV6G07230 FV0G23740 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV6G07230 | 1 | ||
| Tree-based ortholog | 1-to-1 | FV6G07230 | 1 | ||
| Glycine max | Anchor point | N/A | GM03G40236 GM19G42830 GM10G29970 ... | 4 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM20G37400 | 1 | ||
| Tree-based ortholog | 1-to-many | GM10G29970 GM20G37400 | 2 | ||
| Gossypium raimondii | Anchor point | N/A | GR13G11620 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR04G25040 | 1 | ||
| Tree-based ortholog | 1-to-1 | GR04G25040 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ4G008220 | 1 | |
| Tree-based ortholog | 1-to-1 | LJ4G008220 | 1 | ||
| Malus domestica | Anchor point | N/A | MD04G017400 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD00G196450 MD04G017400 | 2 | ||
| Tree-based ortholog | 1-to-many | MD00G196450 MD00G208810 MD00G208840 ... | 4 | ||
| Manihot esculenta | Anchor point | N/A | ME03614G04120 ME11998G01670 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME03614G04150 | 1 | ||
| Tree-based ortholog | 1-to-1 | ME03614G04150 | 1 | ||
| Medicago truncatula | Anchor point | N/A | MT7G114190 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT4G090620 | 1 | ||
| Tree-based ortholog | 1-to-1 | MT4G090620 | 1 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS12G34874 | 1 | |
| Tree-based ortholog | 1-to-many | OS01G27770 OS01G27750 OS12G34874 | 3 | ||
| Ostreococcus lucimarinus | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OL12G02660 | 1 | |
| Tree-based ortholog | 1-to-1 | OL12G02660 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PP00047G00100 | 1 | |
| Tree-based ortholog | 1-to-1 | PP00047G00100 | 1 | ||
| Populus trichocarpa | Anchor point | N/A | PT05G04330 PT13G02980 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT13G02980 | 1 | ||
| Tree-based ortholog | 1-to-1 | PT13G02980 | 1 | ||
| Ricinus communis | Orthologous gene family | many-to-1 | RC29647G00430 | 1 | |
| Anchor point | N/A | RC29726G00880 RC30128G00860 | 2 | ||
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC30128G00870 | 1 | ||
| Tree-based ortholog | 1-to-many | RC30128G00880 RC30128G00890 | 2 | ||
| Solanum lycopersicum | Anchor point | N/A | SL01G067750 | 1 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL01G067750 | 1 | ||
| Tree-based ortholog | 1-to-1 | SL01G067750 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST01G021770 | 1 | |
| Tree-based ortholog | 1-to-many | ST07G014140 ST01G021770 | 2 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP3G05260 | 1 | |
| Tree-based ortholog | 1-to-1 | TP3G05260 | 1 | ||
| Theobroma cacao | Anchor point | N/A | TC0004G27770 TC0005G25050 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0005G25050 | 1 | ||
| Tree-based ortholog | 1-to-many | TC0006G07670 TC0005G25050 | 2 | ||
| Vitis vinifera | Anchor point | N/A | VV05G03610 VV14G04460 | 2 | |
| Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV14G04460 | 1 | ||
| Tree-based ortholog | 1-to-1 | VV14G04460 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM10G05140 | 1 | |
| Tree-based ortholog | 1-to-many | ZM03G12530 ZM10G05140 ZM03G17940 | 3 |