PLAZA 3.0 Dicots gene overview : MD04G017400

Gene: MD04G017400 (Malus domestica)

Overview

Gene Identifier: MD04G017400
Transcript Identifier: MD4G17400.1
Gene Type: Coding gene
Location: 4 : 20531524-20535698 : negative

Family

Gene family: HOM03D001347
(115 genes in 31 species)
specific family
Subfamily: ORTHO03D000753
(68 genes in 30 species)
specific family

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Descriptions

Description (AnnoMine): Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic

Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier	Name
pid	MDP0000176374

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0055114	IEA	InterPro	oxidation-reduction process

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004764	IEA	InterPro	shikimate 3-dehydrogenase (NADP+) activity
GO:0003824	IEA	InterPro	catalytic activity
GO:0003855	IEA	InterPro	3-dehydroquinate dehydratase activity

Color Legend

Experimental Evidence

Electronic Evidence

Computational Reviewed Evidence

InterPro	Description
IPR006151	Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
IPR016040	NAD(P)-binding domain
IPR001381	Dehydroquinase class I
IPR013708	Shikimate dehydrogenase substrate binding, N-terminal
IPR013785	Aldolase-type TIM barrel

Mapman id	Description
13.1.6.1.10	amino acid metabolism.synthesis.aromatic aa.chorismate.dehydroquinate/shikimate dehydrogenase

No SignalP domains detected for this gene.