Integrative Orthology Viewer: PP00309G00400 (Physcomitrella patens)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Physcomitrella patens | Orthologous gene family | PP00134G00580 PP00178G00070 PP00309G00400 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | PP00134G00580 PP00178G00070 PP00309G00400 | 3 | ||
Tree-based ortholog | PP00134G00580 PP00178G00070 PP00309G00400 | 3 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-many | ATR_00001G02790 ATR_00001G02820 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | ATR_00001G02790 ATR_00001G02820 | 2 | ||
Tree-based ortholog | many-to-many | ATR_00066G02670 ATR_00066G02660 | 2 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL3G12920 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL3G12920 | 1 | ||
Tree-based ortholog | many-to-many | AL4G31080 AL4G31130 AL5G24480 ... | 10 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT3G12500 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT3G12500 | 1 | ||
Tree-based ortholog | many-to-many | AT2G43570 AT3G54420 AT2G43580 ... | 9 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV1G09720 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV1G09720 | 1 | ||
Tree-based ortholog | many-to-many | BV7G19230 BV3G08390 BV8G07690 ... | 8 | ||
Brassica rapa | Orthologous gene family | many-to-1 | BR05G30310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR05G30310 | 1 | ||
Tree-based ortholog | many-to-many | BR05G03620 BR03G21580 BR09G35390 ... | 16 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_003G11310 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_003G11310 | 1 | ||
Tree-based ortholog | many-to-many | CRU_004G25090 CRU_004G25120 CRU_005G19770 ... | 11 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00183G00060 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00057G00220 | 1 | ||
Tree-based ortholog | many-to-1 | CP00009G03360 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR05G00310 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-many | CL01G20960 CL01G20970 CL01G20990 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL01G20990 | 1 | ||
Tree-based ortholog | many-to-1 | CL03G06350 | 1 | ||
Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00017G02020 | 1 | |
Tree-based ortholog | many-to-many | CS00364G00050 CS00364G00020 CS01068G00020 ... | 5 | ||
Cucumis melo | Orthologous gene family | many-to-many | CM00007G09970 CM00007G09980 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00007G09970 | 1 | ||
Tree-based ortholog | many-to-1 | CM00001G08870 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0009G12280 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0009G12280 | 1 | ||
Tree-based ortholog | many-to-many | EG0011G17880 EG0001G00160 EG0001G00170 ... | 14 | ||
Fragaria vesca | Orthologous gene family | many-to-many | FV1G12440 FV2G11480 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV1G12440 | 1 | ||
Tree-based ortholog | many-to-many | FV0G44440 FV2G33060 FV0G44510 | 3 | ||
Glycine max | Orthologous gene family | many-to-1 | GM02G04820 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GM02G04820 | 1 | ||
Tree-based ortholog | many-to-many | GM13G42210 GM11G13270 GM12G05310 | 3 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR02G20350 GR02G20360 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | GR02G20350 GR02G20360 | 2 | ||
Tree-based ortholog | many-to-many | GR11G13720 GR11G13730 GR06G23070 ... | 7 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ1G042010 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G042010 | 1 | ||
Tree-based ortholog | many-to-1 | LJ3G046070 | 1 | ||
Malus domestica | Orthologous gene family | many-to-many | MD00G343330 MD00G423370 MD02G010540 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | MD00G343330 MD02G010540 MD00G423370 | 3 | ||
Tree-based ortholog | many-to-many | MD00G203390 MD00G491070 MD04G000960 ... | 7 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME02959G00020 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ME02959G00020 | 1 | ||
Tree-based ortholog | many-to-many | ME07885G00050 ME05280G00020 ME05280G00010 ... | 4 | ||
Medicago truncatula | Orthologous gene family | many-to-many | MT3G118390 MT8G074330 MT8G074350 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT3G118390 | 1 | ||
Tree-based ortholog | many-to-many | MT2G099450 MT2G099470 MT2G099465 | 3 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-many | OS03G30470 OS06G51050 OS06G51060 | 3 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS05G33130 | 1 | ||
Tree-based ortholog | many-to-many | OS02G39330 OS04G41620 OS04G41680 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-many | PT04G18200 PT09G14170 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT04G18200 PT09G14170 | 2 | ||
Tree-based ortholog | many-to-many | PT19G09370 PT13G12500 PT19G09380 ... | 7 | ||
Prunus persica | Orthologous gene family | many-to-many | PPE_007G19920 PPE_008G19160 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_008G19160 | 1 | ||
Tree-based ortholog | many-to-many | PPE_001G20870 PPE_001G20860 PPE_001G20760 ... | 8 | ||
Ricinus communis | Orthologous gene family | many-to-1 | RC29797G00100 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29797G00100 | 1 | ||
Tree-based ortholog | many-to-many | RC27852G00010 RC27753G00010 | 2 | ||
Solanum lycopersicum | Orthologous gene family | many-to-many | SL10G055800 SL10G055810 SL10G055820 ... | 4 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-many | SL10G074440 SL10G055810 SL10G055820 ... | 4 | ||
Tree-based ortholog | many-to-many | SL06G053380 SL04G072000 | 2 | ||
Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST02G009500 | 1 | |
Tree-based ortholog | many-to-many | ST06G017590 ST04G026440 | 2 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP3G10630 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP5G08000 | 1 | ||
Tree-based ortholog | many-to-many | TP4G25690 TP5G08000 TP4G17610 ... | 8 | ||
Theobroma cacao | Orthologous gene family | many-to-many | TC0001G00770 TC0002G04660 | 2 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0002G04660 | 1 | ||
Tree-based ortholog | many-to-many | TC0004G17380 TC0004G17410 TC0004G17420 ... | 4 | ||
Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV00G26750 | 1 | |
Tree-based ortholog | many-to-many | VV05G12990 VV05G13010 VV05G13060 ... | 9 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM06G09870 | 1 | |
Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM06G09870 | 1 | ||
Tree-based ortholog | many-to-many | ZM05G33200 ZM08G07900 ZM10G19420 ... | 7 |