Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench
Integrative Orthology Viewer:
ME03614G02320
(Manihot esculenta)
Inparalogs
| Organism | Source | Genes | #genes | Details |
|---|---|---|---|---|
| Manihot esculenta | Best-Hits-and-Inparalogs(BHI)family | ME02431G00580 ME03614G02320 | 2 |  |
| Orthologous gene family | ME01127G00040 ME02431G00580 ME03614G02320 ... | 4 | ||
| Tree-based ortholog | ME03614G02320 | 1 | ||
| Anchor point | ME02431G00580 | 1 |
Orthologs
| Organism | Source | Type | Genes | #genes | Details |
|---|---|---|---|---|---|
| Amborella trichopoda | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ATR_00004G00400 | 1 | |
| Orthologous gene family | many-to-many | ATR_00002G01570 ATR_00004G00400 | 2 | ||
| Tree-based ortholog | 1-to-1 | ATR_00004G00400 | 1 | ||
| Arabidopsis lyrata | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AL6G18180 | 1 | |
| Orthologous gene family | many-to-many | AL3G03430 AL6G07150 AL6G18180 | 3 | ||
| Tree-based ortholog | 1-to-many | AL6G18180 AL3G03430 | 2 | ||
| Anchor point | 1-to-many | AL3G03430 AL6G18180 | 2 | ||
| Arabidopsis thaliana | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | AT5G18170 | 1 | |
| Orthologous gene family | many-to-many | AT3G03910 AT5G07440 AT5G18170 | 3 | ||
| Tree-based ortholog | 1-to-many | AT5G18170 AT3G03910 | 2 | ||
| Anchor point | 1-to-many | AT5G18170 AT3G03910 | 2 | ||
| Beta vulgaris | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BV3G06320 | 1 | |
| Orthologous gene family | many-to-1 | BV3G06320 | 1 | ||
| Tree-based ortholog | 1-to-1 | BV3G06320 | 1 | ||
| Anchor point | 1-to-1 | BV3G06320 | 1 | ||
| Brassica rapa | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | BR10G16420 | 1 | |
| Orthologous gene family | many-to-many | BR02G04690 BR02G40080 BR03G02760 ... | 6 | ||
| Tree-based ortholog | 1-to-many | BR07G00760 BR02G40080 BR10G16420 | 3 | ||
| Anchor point | 1-to-many | BR10G16420 BR02G40080 BR07G00760 | 3 | ||
| Capsella rubella | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CRU_006G16050 | 1 | |
| Orthologous gene family | many-to-many | CRU_003G02990 CRU_006G06280 CRU_006G16050 | 3 | ||
| Tree-based ortholog | 1-to-many | CRU_006G16050 CRU_003G02990 | 2 | ||
| Anchor point | 1-to-many | CRU_003G02990 CRU_006G16050 | 2 | ||
| Carica papaya | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CP00013G02080 | 1 | |
| Orthologous gene family | many-to-many | CP00013G02080 CP00051G01170 | 2 | ||
| Tree-based ortholog | 1-to-1 | CP00051G01170 | 1 | ||
| Anchor point | 1-to-1 | CP00051G01170 | 1 | ||
| Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CR05G00570 | 1 | |
| Orthologous gene family | many-to-1 | CR05G00570 | 1 | ||
| Tree-based ortholog | 1-to-many | CR09G04250 CR05G00570 | 2 | ||
| Citrullus lanatus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CL04G05370 | 1 | |
| Orthologous gene family | many-to-many | CL01G04910 CL04G05370 CL07G16140 | 3 | ||
| Tree-based ortholog | 1-to-1 | CL04G05370 | 1 | ||
| Anchor point | 1-to-1 | CL04G05370 | 1 | ||
| Citrus sinensis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CS00095G00250 | 1 | |
| Orthologous gene family | many-to-many | CS00087G00400 CS00095G00250 CS00117G00330 | 3 | ||
| Tree-based ortholog | 1-to-1 | CS00117G00330 | 1 | ||
| Anchor point | 1-to-1 | CS00117G00330 | 1 | ||
| Cucumis melo | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | CM00010G00190 | 1 | |
| Orthologous gene family | many-to-many | CM00005G04070 CM00010G00190 CM00031G00960 | 3 | ||
| Tree-based ortholog | 1-to-1 | CM00010G00190 | 1 | ||
| Anchor point | 1-to-1 | CM00010G00190 | 1 | ||
| Eucalyptus grandis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | EG0001G17450 | 1 | |
| Orthologous gene family | many-to-many | EG0001G17450 EG0001G25040 | 2 | ||
| Tree-based ortholog | 1-to-1 | EG0001G17450 | 1 | ||
| Anchor point | 1-to-1 | EG0001G17450 | 1 | ||
| Fragaria vesca | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | FV1G23400 | 1 | |
| Orthologous gene family | many-to-many | FV1G23400 FV5G31670 FV7G31830 | 3 | ||
| Tree-based ortholog | 1-to-1 | FV1G23400 | 1 | ||
| Anchor point | 1-to-1 | FV1G23400 | 1 | ||
| Glycine max | Best-Hits-and-Inparalogs(BHI)family | many-to-many | GM16G04560 GM19G28770 | 2 | |
| Orthologous gene family | many-to-many | GM01G41310 GM02G07940 GM05G05460 ... | 8 | ||
| Tree-based ortholog | 1-to-many | GM16G04560 GM19G28770 GM11G16320 | 3 | ||
| Anchor point | 1-to-many | GM16G26940 GM16G04560 GM19G28770 ... | 4 | ||
| Gossypium raimondii | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | GR04G24440 | 1 | |
| Orthologous gene family | many-to-many | GR03G11080 GR04G24440 GR07G28970 ... | 5 | ||
| Tree-based ortholog | 1-to-1 | GR07G28970 | 1 | ||
| Lotus japonicus | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | LJ1G054290 | 1 | |
| Orthologous gene family | many-to-many | LJ1G054290 LJ2G033930 LJ4G020410 | 3 | ||
| Tree-based ortholog | 1-to-1 | LJ1G054290 | 1 | ||
| Anchor point | 1-to-1 | LJ1G054290 | 1 | ||
| Malus domestica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MD00G384380 | 1 | |
| Orthologous gene family | many-to-1 | MD00G384380 | 1 | ||
| Tree-based ortholog | 1-to-many | MD00G020290 MD00G445460 MD00G444460 | 3 | ||
| Medicago truncatula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | MT6G029460 | 1 | |
| Orthologous gene family | many-to-many | MT4G099320 MT5G013470 MT6G029460 ... | 4 | ||
| Tree-based ortholog | 1-to-1 | MT7G085630 | 1 | ||
| Anchor point | 1-to-many | MT7G085630 MT6G029460 | 2 | ||
| Oryza sativa ssp. japonica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | OS03G58040 | 1 | |
| Orthologous gene family | many-to-many | OS02G43470 OS03G58040 | 2 | ||
| Tree-based ortholog | 1-to-1 | OS03G58040 | 1 | ||
| Physcomitrella patens | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PP00062G01080 | 1 | |
| Orthologous gene family | many-to-1 | PP00062G01080 | 1 | ||
| Tree-based ortholog | 1-to-1 | PP00062G01080 | 1 | ||
| Populus trichocarpa | Best-Hits-and-Inparalogs(BHI)family | many-to-many | PT13G05830 PT19G03480 | 2 | |
| Orthologous gene family | many-to-many | PT12G11350 PT13G05830 PT15G11100 ... | 4 | ||
| Tree-based ortholog | 1-to-many | PT19G03480 PT13G05830 | 2 | ||
| Anchor point | 1-to-many | PT13G05830 PT19G03480 | 2 | ||
| Prunus persica | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | PPE_007G03060 | 1 | |
| Orthologous gene family | many-to-many | PPE_002G25870 PPE_005G06140 PPE_007G03060 | 3 | ||
| Tree-based ortholog | 1-to-1 | PPE_007G03060 | 1 | ||
| Anchor point | 1-to-1 | PPE_007G03060 | 1 | ||
| Ricinus communis | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | RC29950G00150 | 1 | |
| Orthologous gene family | many-to-many | RC29738G00040 RC29950G00150 RC30147G02600 | 3 | ||
| Tree-based ortholog | 1-to-1 | RC29950G00150 | 1 | ||
| Solanum lycopersicum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | SL10G078550 | 1 | |
| Orthologous gene family | many-to-many | SL03G094010 SL06G033860 SL10G078550 | 3 | ||
| Tree-based ortholog | 1-to-1 | SL10G078550 | 1 | ||
| Anchor point | 1-to-1 | SL10G078550 | 1 | ||
| Solanum tuberosum | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ST10G020460 | 1 | |
| Orthologous gene family | many-to-many | ST03G018730 ST05G024710 ST06G015050 ... | 4 | ||
| Tree-based ortholog | 1-to-1 | ST10G020460 | 1 | ||
| Anchor point | 1-to-1 | ST10G020460 | 1 | ||
| Thellungiella parvula | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TP6G26150 | 1 | |
| Orthologous gene family | many-to-many | TP3G02880 TP6G26150 TP6G35430 | 3 | ||
| Tree-based ortholog | 1-to-many | TP3G02880 TP6G26150 | 2 | ||
| Anchor point | 1-to-many | TP6G26150 TP3G02880 | 2 | ||
| Theobroma cacao | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | TC0005G29280 | 1 | |
| Orthologous gene family | many-to-many | TC0003G14700 TC0005G29280 | 2 | ||
| Tree-based ortholog | 1-to-1 | TC0005G29280 | 1 | ||
| Anchor point | 1-to-1 | TC0005G29280 | 1 | ||
| Vitis vinifera | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | VV08G08440 | 1 | |
| Orthologous gene family | many-to-many | VV08G08440 VV16G06440 VV16G06500 | 3 | ||
| Tree-based ortholog | 1-to-1 | VV08G08440 | 1 | ||
| Anchor point | 1-to-1 | VV08G08440 | 1 | ||
| Zea mays | Best-Hits-and-Inparalogs(BHI)family | many-to-1 | ZM01G55860 | 1 | |
| Orthologous gene family | many-to-many | ZM01G55860 ZM10G21300 | 2 | ||
| Tree-based ortholog | 1-to-1 | ZM01G55860 | 1 |