Gene: CRU_003G02990 (Capsella rubella)

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Gene Identifier
CRU_003G02990
Transcript Identifier
CRU_003G02990.1
Gene Type
Coding gene
Location
scaffold_3 : 1033127-1035049 : positive

Family

Gene family
HOM03D001228
(125 genes in 30 species)
specific family
Subfamily
ORTHO03D000417
(90 genes in 30 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Probable glutamate dehydrogenase 3
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
GeneNameCarubv10016292m.g
idPAC:20898450

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006520IEAGenome Projectcellular amino acid metabolic process
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0009448ISOPLAZA Integrative Orthologygamma-aminobutyric acid metabolic processSL10G078550
GO:0051171ISOPLAZA Integrative Orthologyregulation of nitrogen compound metabolic processAT3G03910
GO:0009646ISOPLAZA Tree-based Orthologyresponse to absence of lightAT5G18170
GO:0009651ISOPLAZA Tree-based Orthologyresponse to salt stressAT5G18170
GO:0046686ISOPLAZA Tree-based Orthologyresponse to cadmium ionAT5G18170

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016491IEAGenome Projectoxidoreductase activity
GO:0004353ISOPLAZA Tree-based Orthologyglutamate dehydrogenase [NAD(P)+] activityAT5G18170
GO:0050897ISOPLAZA Tree-based Orthologycobalt ion bindingAT5G18170
GO:0008270ISOPLAZA Tree-based Orthologyzinc ion bindingAT5G18170
GO:0005507ISOPLAZA Tree-based Orthologycopper ion bindingAT5G18170
GO:0005524ISOPLAZA Tree-based OrthologyATP bindingAT5G18170

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT3G03910 AT5G18170

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006096Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal
IPR016040NAD(P)-binding domain
IPR006095Glutamate/phenylalanine/leucine/valine dehydrogenase
IPR006097Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain

Mapman id Description
12.3.1N-metabolism.N-degradation.glutamate dehydrogenase
No SignalP domains detected for this gene.