Integrative Orthology Viewer: BR03G09390 (Brassica rapa)
Inparalogs
Organism | Source | Genes | #genes | Details |
---|---|---|---|---|
Brassica rapa | Orthologous gene family | BR02G10800 BR03G09390 BR10G14010 | 3 | |
Tree-based ortholog | BR03G09390 BR02G10800 | 2 | ||
Anchor point | BR02G10800 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | BR03G09390 | 1 |
Orthologs
Organism | Source | Type | Genes | #genes | Details |
---|---|---|---|---|---|
Amborella trichopoda | Orthologous gene family | many-to-1 | ATR_00004G01680 | 1 | |
Tree-based ortholog | many-to-1 | ATR_00004G01680 | 1 | ||
Anchor point | 1-to-1 | ATR_00004G01680 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ATR_00004G01680 | 1 | ||
Arabidopsis lyrata | Orthologous gene family | many-to-1 | AL6G21610 | 1 | |
Tree-based ortholog | many-to-1 | AL6G21610 | 1 | ||
Anchor point | 1-to-1 | AL6G21610 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AL6G21610 | 1 | ||
Arabidopsis thaliana | Orthologous gene family | many-to-1 | AT5G22000 | 1 | |
Tree-based ortholog | many-to-1 | AT5G22000 | 1 | ||
Anchor point | 1-to-1 | AT5G22000 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | AT5G22000 | 1 | ||
Beta vulgaris | Orthologous gene family | many-to-1 | BV7G04250 | 1 | |
Tree-based ortholog | many-to-1 | BV7G04250 | 1 | ||
Anchor point | 1-to-1 | BV7G04250 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | BV7G04250 | 1 | ||
Capsella rubella | Orthologous gene family | many-to-1 | CRU_006G19120 | 1 | |
Tree-based ortholog | many-to-1 | CRU_006G19120 | 1 | ||
Anchor point | 1-to-1 | CRU_006G19120 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CRU_006G19120 | 1 | ||
Carica papaya | Orthologous gene family | many-to-1 | CP00103G00460 | 1 | |
Tree-based ortholog | many-to-1 | CP00103G00460 | 1 | ||
Anchor point | 1-to-1 | CP00103G00460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CP00103G00460 | 1 | ||
Chlamydomonas reinhardtii | Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CR08G03650 | 1 | |
Citrullus lanatus | Orthologous gene family | many-to-1 | CL03G11450 | 1 | |
Tree-based ortholog | many-to-1 | CL03G11450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CL03G11450 | 1 | ||
Citrus sinensis | Orthologous gene family | many-to-1 | CS00254G00040 | 1 | |
Tree-based ortholog | many-to-many | CS00010G00330 CS00254G00040 | 2 | ||
Anchor point | 1-to-many | CS00018G01340 CS00254G00040 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CS00254G00040 | 1 | ||
Cucumis melo | Orthologous gene family | many-to-1 | CM00024G01290 | 1 | |
Tree-based ortholog | many-to-1 | CM00024G01290 | 1 | ||
Anchor point | 1-to-1 | CM00011G05030 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | CM00024G01290 | 1 | ||
Eucalyptus grandis | Orthologous gene family | many-to-1 | EG0010G05180 | 1 | |
Tree-based ortholog | many-to-1 | EG0010G05180 | 1 | ||
Anchor point | 1-to-1 | EG0010G05180 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | EG0010G05180 | 1 | ||
Fragaria vesca | Orthologous gene family | many-to-1 | FV3G40710 | 1 | |
Tree-based ortholog | many-to-1 | FV3G40710 | 1 | ||
Anchor point | 1-to-1 | FV6G28460 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | FV3G40710 | 1 | ||
Glycine max | Orthologous gene family | many-to-many | GM12G31700 GM13G38720 | 2 | |
Tree-based ortholog | many-to-many | GM12G31700 GM13G38720 | 2 | ||
Anchor point | 1-to-many | GM13G38720 GM12G31700 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GM13G38720 | 1 | ||
Gossypium raimondii | Orthologous gene family | many-to-many | GR01G12670 GR04G01180 GR09G08160 | 3 | |
Tree-based ortholog | many-to-many | GR01G12670 GR09G08160 GR04G01180 | 3 | ||
Anchor point | 1-to-many | GR01G12670 GR09G08160 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | GR09G08160 | 1 | ||
Lotus japonicus | Orthologous gene family | many-to-1 | LJ3G018490 | 1 | |
Tree-based ortholog | many-to-1 | LJ3G018490 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | LJ3G018490 | 1 | ||
Malus domestica | Tree-based ortholog | many-to-many | MD11G013520 MD00G143300 MD00G023780 | 3 | |
Anchor point | 1-to-1 | MD11G013520 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | MD14G004160 MD00G023280 | 2 | ||
Manihot esculenta | Orthologous gene family | many-to-1 | ME00247G00040 | 1 | |
Tree-based ortholog | many-to-1 | ME00247G00040 | 1 | ||
Anchor point | 1-to-1 | ME08542G00600 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ME00247G00040 | 1 | ||
Medicago truncatula | Orthologous gene family | many-to-1 | MT2G087820 | 1 | |
Tree-based ortholog | many-to-1 | MT2G087820 | 1 | ||
Anchor point | 1-to-1 | MT2G087820 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | MT2G087820 | 1 | ||
Oryza sativa ssp. japonica | Orthologous gene family | many-to-1 | OS11G36430 | 1 | |
Tree-based ortholog | many-to-many | OS11G36430 OS03G57500 | 2 | ||
Anchor point | 1-to-1 | OS03G57500 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | OS11G36430 | 1 | ||
Physcomitrella patens | Orthologous gene family | many-to-many | PP00013G00820 PP00158G00070 PP00159G00180 | 3 | |
Tree-based ortholog | many-to-many | PP00159G00180 PP00158G00070 PP00013G00820 | 3 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-many | PP00013G00820 PP00159G00180 PP00158G00070 | 3 | ||
Populus trichocarpa | Orthologous gene family | many-to-1 | PT01G21380 | 1 | |
Tree-based ortholog | many-to-1 | PT01G21380 | 1 | ||
Anchor point | 1-to-1 | PT01G21380 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PT01G21380 | 1 | ||
Prunus persica | Orthologous gene family | many-to-1 | PPE_006G15130 | 1 | |
Tree-based ortholog | many-to-1 | PPE_006G15130 | 1 | ||
Anchor point | 1-to-1 | PPE_006G15130 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | PPE_006G15130 | 1 | ||
Ricinus communis | Tree-based ortholog | many-to-1 | RC29333G00430 | 1 | |
Anchor point | 1-to-1 | RC29333G00430 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | RC29333G00430 | 1 | ||
Solanum lycopersicum | Tree-based ortholog | many-to-many | SL06G073880 SL06G073860 | 2 | |
Anchor point | 1-to-1 | SL06G073860 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | SL10G081710 | 1 | ||
Solanum tuberosum | Orthologous gene family | many-to-1 | ST01G007370 | 1 | |
Tree-based ortholog | many-to-many | ST06G030270 ST06G030290 | 2 | ||
Anchor point | 1-to-many | ST06G030260 ST10G026400 | 2 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ST10G026400 | 1 | ||
Thellungiella parvula | Orthologous gene family | many-to-1 | TP6G23190 | 1 | |
Tree-based ortholog | many-to-1 | TP6G23190 | 1 | ||
Anchor point | 1-to-1 | TP6G23190 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TP6G23190 | 1 | ||
Theobroma cacao | Orthologous gene family | many-to-1 | TC0009G26370 | 1 | |
Tree-based ortholog | many-to-1 | TC0009G26370 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | TC0009G26370 | 1 | ||
Vitis vinifera | Orthologous gene family | many-to-1 | VV06G12450 | 1 | |
Tree-based ortholog | many-to-1 | VV06G12450 | 1 | ||
Anchor point | 1-to-1 | VV06G12450 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | VV06G12450 | 1 | ||
Zea mays | Orthologous gene family | many-to-1 | ZM04G32520 | 1 | |
Tree-based ortholog | many-to-many | ZM04G32520 ZM02G46710 ZM05G02910 | 3 | ||
Anchor point | 1-to-1 | ZM05G02910 | 1 | ||
Best-Hits-and-Inparalogs(BHI)family | 1-to-1 | ZM04G32520 | 1 |