Interactive Phylogenetics Module

Gene Id
evm.TU.AsparagusV1_04.254.V1.1

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
evm.TU.AsparagusV1_04.254.V1.1 Asparagus officinalis HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1509.6 825 100.0
Ma05_g22970 Musa acuminata HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1310.0 825 84.1
GSVIVG01026351001 Vitis vinifera HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1259.6 826 81.6
Aco017843 Ananas comosus HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1214.1 825 80.1
PEQU_21838 Phalaenopsis equestris HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1207.2 818 79.1
ASH_gene21418 Apostasia shenzhenica HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1191.4 826 78.3
Zosma15g01200 Zostera marina HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1187.9 822 77.4
ATR0787G153 Amborella trichopoda HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1184.5 811 80.1
p5.00_sc00185_p0006 Elaeis guineensis HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1178.7 825 78.7
Solyc04g050540.2 Solanum lycopersicum HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1178.3 818 77.0
Potri.019G025100 Populus trichocarpa HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1164.4 826 76.2
AT3G04260 Arabidopsis thaliana HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1154.0 831 73.8
Sobic.001G228300 Sorghum bicolor HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1119.8 815 73.7
LOC_Os10g32540 Oryza sativa ssp. japonica HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1119.4 820 73.0
OsR498G1018856300.01 Oryza sativa ssp. indica HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1111.3 820 72.8
Oropetium_20150105_19949 Oropetium thomaeum HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1105.5 822 73.2
OB10G19680 Oryza brachyantha HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1100.1 797 74.2
PH01000560G0020 Phyllostachys edulis HOM04x5M004972 ORTHO04x5M006115 0.0e+00 1084.7 867 69.4
Seita.9G231500 Setaria italica HOM04x5M004972 ORTHO04x5M006115 8.9e-312 1072.0 861 68.9
Sspon.01G0019070-2C Saccharum spontaneum HOM04x5M004972 ORTHO04x5M006115 1.4e-301 1038.1 807 67.2
Spipo11G0060000 Spirodela polyrhiza HOM04x5M004972 ORTHO04x5M006115 1.9e-301 1037.7 816 67.4
Bradi3g28060 Brachypodium distachyon HOM04x5M004972 ORTHO04x5M006115 1.9e-290 1001.1 818 67.1
LP008086 Lolium perenne HOM04x5M004972 ORTHO04x5M006115 4.3e-290 1000.0 815 66.6
TraesCS1A02G144800 Triticum aestivum HOM04x5M004972 ORTHO04x5M006115 7.4e-290 999.2 817 67.7
TraesCS1D02G143900 Triticum aestivum HOM04x5M004972 ORTHO04x5M006115 2.4e-288 994.2 817 67.4
TraesCS1B02G162100 Triticum aestivum HOM04x5M004972 ORTHO04x5M006115 2.6e-279 964.1 817 66.2
TRITD1Bv1G091280 Triticum turgidum HOM04x5M004972 ORTHO04x5M006115 2.6e-279 964.1 817 66.2
Misin01G211400 Miscanthus sinensis HOM04x5M004972 ORTHO04x5M006115 5.9e-279 963.0 706 74.6
TRITD1Av1G089150 Triticum turgidum HOM04x5M004972 ORTHO04x5M006115 6.5e-278 959.5 817 65.9
CALSI_Maker00003725 Calamus simplicifolius HOM04x5M004972 ORTHO04x5M006115 9.7e-274 945.7 880 65.1
Sspon.01G0019070-3D Saccharum spontaneum HOM04x5M004972 ORTHO04x5M006115 2.7e-260 901.0 817 62.9
Pgl_GLEAN_10032290 Cenchrus americanus HOM04x5M004972 ORTHO04x5M006115 1.6e-244 848.6 776 64.0
Zm00007a00043883 Zea mays B104 HOM04x5M004972 ORTHO04x5M006115 1.3e-214 749.2 603 71.0
Mapoly0031s0123 Marchantia polymorpha HOM04x5M004972 ORTHO04x5M006115 8.1e-212 740.0 828 51.3
Zm00008a004246 Zea mays PH207 HOM04x5M004972 ORTHO04x5M006115 7.5e-210 733.4 577 72.3
gene10271 Selaginella moellendorffii HOM04x5M004972 ORTHO04x5M006115 7.6e-178 627.1 814 44.7
gene1241 Selaginella moellendorffii HOM04x5M004972 ORTHO04x5M006115 9.9e-178 626.7 813 43.3
Pp3c1_8170 Physcomitrium patens HOM04x5M004972 ORTHO04x5M006115 1.1e-168 596.7 816 47.2
Zjn_sc00020.1.g05920.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004972 ORTHO04x5M006115 1.7e-100 370.2 836 38.2
Sspon.01G0019070-1A Saccharum spontaneum HOM04x5M004972 ORTHO04x5M006115 2.0e-93 346.7 481 45.3
Zm00007a00043884 Zea mays B104 HOM04x5M004972 ORTHO04x5M006115 2.2e-84 316.6 231 67.5
Zm00001d032790 Zea mays B73 HOM04x5M004972 ORTHO04x5M006115 8.4e-76 288.1 207 69.6
PAB00054122 Picea abies HOM04x5M004972 ORTHO04x5M006115 6.6e-73 278.5 361 51.5
Zm00008a004247 Zea mays PH207 HOM04x5M004972 ORTHO04x5M006115 9.3e-67 258.1 140 85.0
Aco023117 Ananas comosus HOM04x5M004972 ORTHO04x5M006115 2.4e-62 243.4 355 56.1
Aco023118 Ananas comosus HOM04x5M004972 ORTHO04x5M006115 3.1e-62 243.0 144 83.3
PAB00012923 Picea abies HOM04x5M004972 ORTHO04x5M006115 3.1e-62 243.0 186 67.7
Misin02G207100 Miscanthus sinensis HOM04x5M004972 ORTHO04x5M006115 4.6e-50 202.6 126 77.0
Solyc01g014040.1 Solanum lycopersicum HOM04x5M004972 ORTHO04x5M006115 2.0e-24 117.5 120 52.5
PAB00058502 Picea abies HOM04x5M004972 ORTHO04x5M006115 3.7e-23 113.2 85 69.4
Solyc01g013970.1 Solanum lycopersicum HOM04x5M004972 ORTHO04x5M006115 3.8e-20 103.2 87 57.5
LOC_Os10g32348 Oryza sativa ssp. japonica HOM04x5M006282 ORTHO04x5M007822 1.6e-18 97.8 87 55.2
LOC_Os10g32300 Oryza sativa ssp. japonica HOM04x5M006282 ORTHO04x5M007822 1.6e-18 97.8 87 55.2
Solyc01g016930.1 Solanum lycopersicum HOM04x5M004972 ORTHO04x5M006115 2.6e-16 90.5 82 70.7
OsR498G1018852200.01 Oryza sativa ssp. indica HOM04x5M003218 ORTHO04x5M004014 6.3e-15 85.9 72 59.7
OsR498G1018850800.01 Oryza sativa ssp. indica HOM04x5M006282 ORTHO04x5M007822 6.3e-15 85.9 72 59.7
Solyc01g016920.1 Solanum lycopersicum HOM04x5M004972 ORTHO04x5M006115 4.1e-14 83.2 50 82.0
Solyc01g015200.1 Solanum lycopersicum HOM04x5M004972 ORTHO04x5M006115 2.0e-13 80.9 79 48.1
Solyc01g016870.1 Solanum lycopersicum HOM04x5M004972 ORTHO04x5M006115 5.5e-11 72.8 47 78.7
Solyc01g014000.1 Solanum lycopersicum HOM04x5M004972 ORTHO04x5M006115 7.2e-11 72.4 75 50.7
OsR498G1018853400.01 Oryza sativa ssp. indica HOM04x5M003218 ORTHO04x5M004014 5.4e-06 56.2 44 61.4

Amborella trichopoda (1 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (0 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (4 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (1 genes)
Physcomitrium patens (1 genes)
Picea abies (3 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (3 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (8 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings