Interactive Phylogenetics Module

Gene Id
Zm00007a00001336

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00007a00001339 Zea mays B104 HOM04x5M001025 ORTHO04x5M001180 3.5e-111 403.7 210 100.0
Zm00007a00001336 Zea mays B104 HOM04x5M001025 ORTHO04x5M001180 3.5e-111 403.7 210 100.0
Seita.5G046700 Setaria italica HOM04x5M001025 ORTHO04x5M001180 6.1e-39 163.7 195 54.9
Sobic.003G126800 Sorghum bicolor HOM04x5M001025 ORTHO04x5M001180 1.0e-38 162.9 195 55.4
Misin06G106700 Miscanthus sinensis HOM04x5M001025 ORTHO04x5M001180 2.3e-38 161.8 195 54.9
Sspon.03G0034930-3D Saccharum spontaneum HOM04x5M001025 ORTHO04x5M001180 2.3e-38 161.8 195 54.4
Sspon.03G0034930-1B Saccharum spontaneum HOM04x5M001025 ORTHO04x5M001180 3.9e-38 161.0 195 54.4
MisinT267700 Miscanthus sinensis HOM04x5M001025 ORTHO04x5M001180 1.1e-37 159.5 195 53.8
Zm00001d008268 Zea mays B73 HOM04x5M001025 ORTHO04x5M001180 5.7e-37 157.1 195 52.8
Zm00007a00029304 Zea mays B104 HOM04x5M001025 ORTHO04x5M001180 5.7e-37 157.1 195 52.8
Zm00008a029844 Zea mays PH207 HOM04x5M001025 ORTHO04x5M001180 5.7e-37 157.1 195 52.8
Zjn_sc00026.1.g02690.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001025 ORTHO04x5M001180 5.3e-35 150.6 184 53.8
Oropetium_20150105_09645 Oropetium thomaeum HOM04x5M001025 ORTHO04x5M001180 6.5e-33 143.7 184 51.6
Pgl_GLEAN_10022738 Cenchrus americanus HOM04x5M001025 ORTHO04x5M001180 7.2e-32 140.2 195 50.3
PH01000094G1290 Phyllostachys edulis HOM04x5M001025 ORTHO04x5M001180 7.2e-32 140.2 184 50.5
Zjn_sc00043.1.g02640.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001025 ORTHO04x5M001180 3.6e-31 137.9 187 49.2
OB01G20920 Oryza brachyantha HOM04x5M001025 ORTHO04x5M001180 7.9e-31 136.7 179 50.8
Bradi2g10146 Brachypodium distachyon HOM04x5M001025 ORTHO04x5M001180 1.0e-30 136.3 184 48.9
LOC_Os01g16430 Oryza sativa ssp. japonica HOM04x5M001025 ORTHO04x5M001180 1.0e-30 136.3 180 50.0
OsR498G0100632000.01 Oryza sativa ssp. indica HOM04x5M001025 ORTHO04x5M001180 1.0e-30 136.3 180 50.0
TraesCS3D02G189800 Triticum aestivum HOM04x5M001025 ORTHO04x5M001180 3.9e-30 134.4 183 48.6
HORVU3Hr1G038190 Hordeum vulgare HOM04x5M001025 ORTHO04x5M001180 8.8e-30 133.3 183 48.1
TraesCS3A02G185800 Triticum aestivum HOM04x5M001025 ORTHO04x5M001180 1.1e-29 132.9 183 48.1
TraesCS3B02G215400 Triticum aestivum HOM04x5M001025 ORTHO04x5M001180 2.6e-29 131.7 182 48.9
LP014549 Lolium perenne HOM04x5M001025 ORTHO04x5M001180 9.7e-29 129.8 183 47.0
Sspon.03G0034930-2C Saccharum spontaneum HOM04x5M001025 ORTHO04x5M001180 2.4e-27 125.2 173 51.4
CALSI_Maker00020117 Calamus simplicifolius HOM04x5M001025 ORTHO04x5M001180 2.2e-25 118.6 185 43.2
p5.00_sc00965_p0001 Elaeis guineensis HOM04x5M001025 ORTHO04x5M001180 6.5e-25 117.1 185 42.7
Potri.001G032900 Populus trichocarpa HOM04x5M001025 ORTHO04x5M001180 6.1e-23 110.5 183 41.0
evm.TU.AsparagusV1_07.1767.V1.1 Asparagus officinalis HOM04x5M001025 ORTHO04x5M001180 3.0e-22 108.2 186 39.8
ASH_gene14000 Apostasia shenzhenica HOM04x5M001025 ORTHO04x5M001180 3.0e-22 108.2 182 41.2
Potri.003G192200 Populus trichocarpa HOM04x5M001025 ORTHO04x5M001180 6.7e-22 107.1 183 39.9
ATR0307G050 Amborella trichopoda HOM04x5M001025 ORTHO04x5M001180 2.8e-20 101.7 177 40.7
PEQU_03074 Phalaenopsis equestris HOM04x5M001025 ORTHO04x5M001180 4.8e-20 100.9 185 37.8
Zm00008a039611 Zea mays PH207 HOM04x5M001025 ORTHO04x5M257694 7.0e-19 97.1 49 100.0
Spipo3G0066400 Spirodela polyrhiza HOM04x5M001025 ORTHO04x5M001180 1.2e-18 96.3 185 37.8
Aco014950 Ananas comosus HOM04x5M001025 ORTHO04x5M001180 2.7e-18 95.1 185 39.5
AT3G12490 Arabidopsis thaliana HOM04x5M001025 ORTHO04x5M001180 4.5e-18 94.4 180 37.2
Ma02_g01790 Musa acuminata HOM04x5M001025 ORTHO04x5M001180 2.9e-17 91.7 71 66.2
Ma03_g19290 Musa acuminata HOM04x5M001025 ORTHO04x5M001180 6.5e-17 90.5 108 50.9
p5.00_sc00008_p0212 Elaeis guineensis HOM04x5M001025 ORTHO04x5M001180 2.5e-16 88.6 116 49.1
GSVIVG01025801001 Vitis vinifera HOM04x5M001025 ORTHO04x5M001180 4.2e-16 87.8 183 36.1
CALSI_Maker00039610 Calamus simplicifolius HOM04x5M001025 ORTHO04x5M001180 1.6e-15 85.9 158 39.9
Potri.016G030900 Populus trichocarpa HOM04x5M001025 ORTHO04x5M001180 4.7e-15 84.3 183 37.2
GSVIVG01036582001 Vitis vinifera HOM04x5M000005 ORTHO04x5M000057 1.5e-13 79.3 158 38.0
PEQU_12012 Phalaenopsis equestris HOM04x5M001025 ORTHO04x5M001180 2.6e-13 78.6 110 49.1
p5.00_sc00040_p0025 Elaeis guineensis HOM04x5M001025 ORTHO04x5M001180 4.4e-13 77.8 72 58.3
p5.00_sc00324_p0013 Elaeis guineensis HOM04x5M001025 ORTHO04x5M001180 1.7e-12 75.9 171 33.9
evm.TU.AsparagusV1_05.50.V1.1 Asparagus officinalis HOM04x5M001025 ORTHO04x5M001180 2.2e-12 75.5 71 53.5
Solyc03g097270.2 Solanum lycopersicum HOM04x5M001025 ORTHO04x5M001180 2.2e-12 75.5 178 32.0
p5.00_sc00189_p0023 Elaeis guineensis HOM04x5M001025 ORTHO04x5M001180 1.4e-11 72.8 172 32.6
Solyc01g009020.2 Solanum lycopersicum HOM04x5M001025 ORTHO04x5M001180 3.1e-11 71.6 71 52.1
Potri.006G033201 Populus trichocarpa HOM04x5M001025 ORTHO04x5M001180 5.4e-11 70.9 71 56.3
Zosma94g00120 Zostera marina HOM04x5M001025 ORTHO04x5M001180 5.4e-11 70.9 184 32.1
PH01019743G0010 Phyllostachys edulis HOM04x5M001025 ORTHO04x5M001180 2.7e-10 68.6 82 53.7
CALSI_Maker00031411 Calamus simplicifolius HOM04x5M001025 ORTHO04x5M001180 3.5e-10 68.2 63 55.6
CALSI_Maker00003375 Calamus simplicifolius HOM04x5M001025 ORTHO04x5M001180 3.5e-10 68.2 63 55.6
Zosma37g00470 Zostera marina HOM04x5M001025 ORTHO04x5M001180 3.8e-09 64.7 75 46.7
Spipo6G0013000 Spirodela polyrhiza HOM04x5M001025 ORTHO04x5M001180 5.0e-09 64.3 68 47.1
Potri.001G225800 Populus trichocarpa HOM04x5M001025 ORTHO04x5M001180 6.5e-09 63.9 71 45.1
PAB00042347 Picea abies HOM04x5M001025 ORTHO04x5M001180 1.1e-08 63.2 175 31.4
PH01000766G0340 Phyllostachys edulis HOM04x5M001025 ORTHO04x5M010429 1.5e-08 62.8 66 50.0
Potri.009G022300 Populus trichocarpa HOM04x5M001025 ORTHO04x5M001180 1.5e-08 62.8 68 47.1
AT5G05110 Arabidopsis thaliana HOM04x5M001025 ORTHO04x5M001180 2.5e-08 62.0 60 53.3
Ma11_g18530 Musa acuminata HOM04x5M001025 ORTHO04x5M001180 4.2e-08 61.2 69 49.3
GSVIVG01037389001 Vitis vinifera HOM04x5M001025 ORTHO04x5M001180 4.2e-08 61.2 71 45.1
TraesCS1D02G255800 Triticum aestivum HOM04x5M001025 ORTHO04x5M010429 5.5e-08 60.8 111 35.1
Aco021907 Ananas comosus HOM04x5M001025 ORTHO04x5M001180 9.5e-08 60.1 60 51.7
Zjn_sc00009.1.g09260.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001025 ORTHO04x5M001180 9.5e-08 60.1 55 58.2
AT5G12140 Arabidopsis thaliana HOM04x5M001025 ORTHO04x5M001180 1.2e-07 59.7 68 47.1
HORVU1Hr1G063320 Hordeum vulgare HOM04x5M001025 ORTHO04x5M010429 1.2e-07 59.7 66 45.5
LP005652 Lolium perenne HOM04x5M001025 ORTHO04x5M010429 1.2e-07 59.7 99 37.4
TRITD1Av1G163050 Triticum turgidum HOM04x5M001025 ORTHO04x5M010429 1.6e-07 59.3 100 36.0
Oropetium_20150105_18613 Oropetium thomaeum HOM04x5M001025 ORTHO04x5M001180 2.1e-07 58.9 69 52.2
TraesCS1A02G256400 Triticum aestivum HOM04x5M001025 ORTHO04x5M010429 2.1e-07 58.9 66 45.5
TraesCS1B02G267100 Triticum aestivum HOM04x5M001025 ORTHO04x5M010429 2.1e-07 58.9 66 45.5
TRITD1Bv1G149070 Triticum turgidum HOM04x5M001025 ORTHO04x5M010429 2.1e-07 58.9 66 45.5
OsR498G0510822700.01 Oryza sativa ssp. indica HOM04x5M001025 ORTHO04x5M010429 2.8e-07 58.5 94 38.3
Sobic.009G182000 Sorghum bicolor HOM04x5M001025 ORTHO04x5M001180 2.8e-07 58.5 61 52.5
Oropetium_20150105_05102 Oropetium thomaeum HOM04x5M001025 ORTHO04x5M010429 3.6e-07 58.2 70 44.3
Zm00001d038558 Zea mays B73 HOM04x5M001025 ORTHO04x5M001180 3.6e-07 58.2 62 53.2
Zm00007a00014919 Zea mays B104 HOM04x5M001025 ORTHO04x5M001180 3.6e-07 58.2 62 53.2
Zm00008a026090 Zea mays PH207 HOM04x5M001025 ORTHO04x5M001180 3.6e-07 58.2 62 53.2
Pgl_GLEAN_10033742 Cenchrus americanus HOM04x5M001025 ORTHO04x5M010429 4.7e-07 57.8 68 47.1
Mapoly0003s0166 Marchantia polymorpha HOM04x5M001025 ORTHO04x5M001180 4.7e-07 57.8 175 28.6
OB05G24170 Oryza brachyantha HOM04x5M001025 ORTHO04x5M010429 4.7e-07 57.8 66 45.5
LOC_Os05g33880 Oryza sativa ssp. japonica HOM04x5M001025 ORTHO04x5M010429 4.7e-07 57.8 61 47.5
Bradi2g25507 Brachypodium distachyon HOM04x5M001025 ORTHO04x5M010429 6.1e-07 57.4 66 45.5
Mapoly0023s0004 Marchantia polymorpha HOM04x5M001025 ORTHO04x5M001180 6.1e-07 57.4 197 28.9
Seita.3G244700 Setaria italica HOM04x5M001025 ORTHO04x5M010429 6.1e-07 57.4 70 45.7
TRITD3Bv1G093060 Triticum turgidum HOM04x5M001025 ORTHO04x5M001180 6.1e-07 57.4 33 84.8
TRITD3Av1G090810 Triticum turgidum HOM04x5M001025 ORTHO04x5M001180 6.1e-07 57.4 33 84.8
Zjn_sc00025.1.g01600.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001025 ORTHO04x5M010429 6.1e-07 57.4 70 44.3
HORVU1Hr1G067980 Hordeum vulgare HOM04x5M001025 ORTHO04x5M001180 8.0e-07 57.0 60 51.7
HORVU1Hr1G067870 Hordeum vulgare HOM04x5M001025 ORTHO04x5M001180 8.0e-07 57.0 60 51.7
Misin16G138100 Miscanthus sinensis HOM04x5M001025 ORTHO04x5M010429 8.0e-07 57.0 70 45.7
Misin17G138900 Miscanthus sinensis HOM04x5M001025 ORTHO04x5M010429 8.0e-07 57.0 70 45.7
Sobic.009G135900 Sorghum bicolor HOM04x5M001025 ORTHO04x5M010429 8.0e-07 57.0 70 45.7
Sspon.07G0008120-1A Saccharum spontaneum HOM04x5M001025 ORTHO04x5M010429 8.0e-07 57.0 70 45.7
Sspon.07G0008120-4D Saccharum spontaneum HOM04x5M001025 ORTHO04x5M010429 8.0e-07 57.0 70 45.7
TraesCS1D02G310300 Triticum aestivum HOM04x5M001025 ORTHO04x5M001180 8.0e-07 57.0 60 51.7
Ma06_g00760 Musa acuminata HOM04x5M001025 ORTHO04x5M001180 1.0e-06 56.6 63 46.0
Sspon.07G0008120-3C Saccharum spontaneum HOM04x5M001025 ORTHO04x5M010429 1.8e-06 55.8 126 33.3
AT2G40880 Arabidopsis thaliana HOM04x5M001025 ORTHO04x5M001180 2.3e-06 55.5 88 37.5
LP015243 Lolium perenne HOM04x5M001025 ORTHO04x5M001180 2.3e-06 55.5 60 48.3
Misin16G185100 Miscanthus sinensis HOM04x5M001025 ORTHO04x5M001180 2.3e-06 55.5 61 50.8
Sspon.07G0005080-1T Saccharum spontaneum HOM04x5M001025 ORTHO04x5M001180 2.3e-06 55.5 61 50.8
Sspon.07G0005080-1A Saccharum spontaneum HOM04x5M001025 ORTHO04x5M001180 2.3e-06 55.5 61 50.8
Sspon.07G0005080-2P Saccharum spontaneum HOM04x5M001025 ORTHO04x5M001180 2.3e-06 55.5 61 50.8
Sspon.07G0005080-2B Saccharum spontaneum HOM04x5M001025 ORTHO04x5M001180 2.3e-06 55.5 61 50.8
Sspon.07G0005080-1P Saccharum spontaneum HOM04x5M001025 ORTHO04x5M001180 2.3e-06 55.5 61 50.8
Sspon.07G0005080-4D Saccharum spontaneum HOM04x5M001025 ORTHO04x5M001180 2.3e-06 55.5 61 50.8
Zm00001d010290 Zea mays B73 HOM04x5M001025 ORTHO04x5M010429 2.3e-06 55.5 65 46.2
Zm00007a00008095 Zea mays B104 HOM04x5M001025 ORTHO04x5M010429 2.3e-06 55.5 65 46.2
Zm00008a031321 Zea mays PH207 HOM04x5M001025 ORTHO04x5M010429 2.3e-06 55.5 65 46.2
LP034884 Lolium perenne HOM04x5M001025 ORTHO04x5M001180 3.0e-06 55.1 54 53.7
Zm00001d038173 Zea mays B73 HOM04x5M001025 ORTHO04x5M010429 3.0e-06 55.1 70 44.3
Zm00007a00011722 Zea mays B104 HOM04x5M001025 ORTHO04x5M010429 3.0e-06 55.1 70 44.3
PH01001724G0420 Phyllostachys edulis HOM04x5M001025 ORTHO04x5M001180 4.0e-06 54.7 60 50.0
Misin17G185400 Miscanthus sinensis HOM04x5M001025 ORTHO04x5M001180 5.2e-06 54.3 61 49.2
PH01001536G0030 Phyllostachys edulis HOM04x5M001025 ORTHO04x5M001180 5.2e-06 54.3 60 48.3
Pp3c9_24080 Physcomitrium patens HOM04x5M001025 ORTHO04x5M001180 5.2e-06 54.3 186 26.9
Sspon.03G0004220-1A Saccharum spontaneum HOM04x5M001025 ORTHO04x5M001180 5.2e-06 54.3 68 45.6
Sspon.03G0004220-3C Saccharum spontaneum HOM04x5M001025 ORTHO04x5M001180 5.2e-06 54.3 68 45.6
Sspon.03G0004220-2B Saccharum spontaneum HOM04x5M001025 ORTHO04x5M001180 5.2e-06 54.3 68 45.6
Sspon.03G0004220-4D Saccharum spontaneum HOM04x5M001025 ORTHO04x5M001180 5.2e-06 54.3 68 45.6
Sspon.03G0004220-1T Saccharum spontaneum HOM04x5M001025 ORTHO04x5M001180 5.2e-06 54.3 68 45.6
Zm00001d012561 Zea mays B73 HOM04x5M001025 ORTHO04x5M001180 5.2e-06 54.3 75 42.7
Zm00007a00018599 Zea mays B104 HOM04x5M001025 ORTHO04x5M001180 5.2e-06 54.3 75 42.7
Zm00008a033064 Zea mays PH207 HOM04x5M001025 ORTHO04x5M001180 5.2e-06 54.3 75 42.7
LP003940 Lolium perenne HOM04x5M001025 ORTHO04x5M001180 6.8e-06 53.9 69 43.5
HORVU3Hr1G078680 Hordeum vulgare HOM04x5M001025 ORTHO04x5M001180 8.8e-06 53.5 53 50.9
Oropetium_20150105_03413 Oropetium thomaeum HOM04x5M001025 ORTHO04x5M001180 8.8e-06 53.5 60 46.7
Pp3c8_17580 Physcomitrium patens HOM04x5M001025 ORTHO04x5M001180 8.8e-06 53.5 186 27.4
Seita.3G194100 Setaria italica HOM04x5M001025 ORTHO04x5M001180 8.8e-06 53.5 61 50.8

Amborella trichopoda (1 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (4 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (4 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (5 genes)
Hordeum vulgare (5 genes)
Lolium perenne (5 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (4 genes)
Oropetium thomaeum (4 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (2 genes)
Picea abies (1 genes)
Populus trichocarpa (6 genes)
Saccharum spontaneum (17 genes)
Selaginella moellendorffii (0 genes)
Setaria italica (3 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (7 genes)
Triticum turgidum (4 genes)
Vitis vinifera (3 genes)
Zea mays B73 (5 genes)
Zea mays B104 (7 genes)
Zea mays PH207 (5 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (4 genes)

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