Interactive Phylogenetics Module

Gene Id
Zm00001d052895

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zm00001d052895 Zea mays B73 HOM04x5M002412 ORTHO04x5M002551 9.9e-202 705.3 373 100.0
Zm00007a00029929 Zea mays B104 HOM04x5M002412 ORTHO04x5M002551 1.9e-200 701.0 373 99.5
Zm00008a018045 Zea mays PH207 HOM04x5M002412 ORTHO04x5M002551 7.5e-149 529.6 378 81.0
Sspon.06G0001760-1A Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 1.1e-147 525.8 382 80.1
Misin13G182100 Miscanthus sinensis HOM04x5M002412 ORTHO04x5M002551 2.3e-145 518.1 382 78.5
Sspon.06G0001760-3C Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 8.9e-134 479.6 383 74.9
Sobic.007G209400 Sorghum bicolor HOM04x5M002412 ORTHO04x5M002551 2.2e-132 474.9 381 74.8
Sspon.06G0001760-2B Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 2.2e-132 474.9 383 75.2
Sspon.06G0001760-4D Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 7.0e-131 469.9 383 74.2
TraesCS7B02G144200 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 1.3e-103 379.4 390 60.8
TRITD7Bv1G067520 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 4.8e-103 377.5 390 60.5
TraesCS7D02G245900 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 1.1e-102 376.3 381 59.6
TraesCS7A02G247300 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 2.2e-100 368.6 391 58.6
TRITD7Av1G093150 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 2.2e-100 368.6 391 58.6
Bradi3g40070 Brachypodium distachyon HOM04x5M002412 ORTHO04x5M002551 3.6e-95 351.3 388 57.0
LP013033 Lolium perenne HOM04x5M002412 ORTHO04x5M002551 6.2e-95 350.5 374 58.6
Zjn_sc00015.1.g05520.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002412 ORTHO04x5M002551 6.0e-90 334.0 391 56.8
OB08G26970 Oryza brachyantha HOM04x5M002412 ORTHO04x5M002551 5.1e-89 330.9 402 54.2
TraesCS5D02G274500 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 5.3e-86 320.9 387 53.5
TraesCS5B02G266300 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 6.9e-86 320.5 391 52.4
TRITD5Bv1G149550 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 6.9e-86 320.5 391 52.4
PH01001573G0110 Phyllostachys edulis HOM04x5M002412 ORTHO04x5M002551 2.6e-85 318.5 359 56.5
HORVU5Hr1G073600 Hordeum vulgare HOM04x5M002412 ORTHO04x5M002551 7.6e-85 317.0 386 52.6
OsR498G0917731000.01 Oryza sativa ssp. indica HOM04x5M002412 ORTHO04x5M002551 1.3e-84 316.2 388 53.4
LOC_Os08g39990 Oryza sativa ssp. japonica HOM04x5M002412 ORTHO04x5M002551 2.9e-84 315.1 403 53.3
Sobic.002G248700 Sorghum bicolor HOM04x5M002412 ORTHO04x5M002551 3.8e-84 314.7 398 51.5
TraesCS5A02G266700 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 1.9e-83 312.4 385 52.7
LOC_Os09g31458 Oryza sativa ssp. japonica HOM04x5M002412 ORTHO04x5M002551 2.5e-83 312.0 388 52.8
Bradi4g33830 Brachypodium distachyon HOM04x5M002412 ORTHO04x5M002551 1.2e-82 309.7 390 52.6
LP030105 Lolium perenne HOM04x5M002412 ORTHO04x5M002551 1.6e-82 309.3 382 53.9
OsR498G0816446400.01 Oryza sativa ssp. indica HOM04x5M002412 ORTHO04x5M002551 1.5e-80 302.8 273 65.2
Zm00008a009131 Zea mays PH207 HOM04x5M002412 ORTHO04x5M002551 4.3e-80 301.2 393 51.1
Zm00001d006031 Zea mays B73 HOM04x5M002412 ORTHO04x5M002551 6.2e-79 297.4 400 50.0
TRITD5Av1G160070 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 2.4e-78 295.4 385 51.2
Zm00007a00028357 Zea mays B104 HOM04x5M002412 ORTHO04x5M002551 2.4e-78 295.4 400 49.8
MisinT266100 Miscanthus sinensis HOM04x5M002412 ORTHO04x5M002551 2.1e-74 282.3 396 48.2
Zm00001d020948 Zea mays B73 HOM04x5M002412 ORTHO04x5M002551 5.7e-72 274.2 397 47.6
Zm00007a00035266 Zea mays B104 HOM04x5M002412 ORTHO04x5M002551 5.7e-72 274.2 397 47.6
Sspon.06G0001760-2P Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 7.4e-72 273.9 392 46.7
Sspon.06G0001760-1P Saccharum spontaneum HOM04x5M002412 ORTHO04x5M002551 1.6e-71 272.7 392 46.7
Misin04G230000 Miscanthus sinensis HOM04x5M002412 ORTHO04x5M002551 3.7e-71 271.6 394 47.0
Zjn_sc00008.1.g09320.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002412 ORTHO04x5M002551 3.4e-69 265.0 386 46.1
Zm00001d045948 Zea mays B73 HOM04x5M000039 ORTHO04x5M002551 5.0e-68 261.2 394 46.7
Zm00007a00028008 Zea mays B104 HOM04x5M000039 ORTHO04x5M002551 7.2e-67 257.3 316 51.6
CALSI_Maker00035014 Calamus simplicifolius HOM04x5M002412 ORTHO04x5M002551 5.5e-59 231.1 332 46.4
CALSI_Maker00024525 Calamus simplicifolius HOM04x5M002412 ORTHO04x5M002551 5.5e-59 231.1 332 46.4
Zm00001d043192 Zea mays B73 HOM04x5M002412 ORTHO04x5M002551 4.7e-58 228.0 373 45.0
Zm00007a00022663 Zea mays B104 HOM04x5M002412 ORTHO04x5M002551 4.7e-58 228.0 373 45.0
p5.00_sc00037_p0128 Elaeis guineensis HOM04x5M002412 ORTHO04x5M002551 2.3e-57 225.7 388 44.3
Ma09_g12010 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 3.7e-55 218.4 374 42.2
CALSI_Maker00032976 Calamus simplicifolius HOM04x5M002412 ORTHO04x5M002551 1.4e-54 216.5 387 42.1
Aco000750 Ananas comosus HOM04x5M002412 ORTHO04x5M002551 5.3e-54 214.5 255 51.4
Ma08_g25090 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 3.5e-53 211.8 309 45.0
Ma06_g38250 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 2.5e-51 205.7 353 42.8
Spipo12G0038000 Spirodela polyrhiza HOM04x5M002412 ORTHO04x5M002551 1.0e-49 200.3 392 38.8
p5.00_sc00131_p0014 Elaeis guineensis HOM04x5M002412 ORTHO04x5M002551 5.2e-49 198.0 394 40.9
PH01001286G0020 Phyllostachys edulis HOM04x5M002412 ORTHO04x5M002767 6.7e-49 197.6 296 49.7
Ma05_g24710 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 8.8e-49 197.2 308 43.2
Spipo0G0076700 Spirodela polyrhiza HOM04x5M002412 ORTHO04x5M002551 4.4e-48 194.9 304 42.4
PEQU_14985 Phalaenopsis equestris HOM04x5M002412 ORTHO04x5M002551 3.5e-45 185.3 374 36.9
HORVU7Hr1G050870 Hordeum vulgare HOM04x5M002412 ORTHO04x5M002551 7.7e-45 184.1 271 50.2
Ma04_g25960 Musa acuminata HOM04x5M002412 ORTHO04x5M002551 1.0e-44 183.7 376 38.8
Zm00008a028438 Zea mays PH207 HOM04x5M002412 ORTHO04x5M002551 1.5e-43 179.9 386 38.6
AT3G57990 Arabidopsis thaliana HOM04x5M002412 ORTHO04x5M002551 1.4e-41 173.3 320 38.1
Potri.006G191800 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 3.0e-41 172.2 384 34.4
Aco018516 Ananas comosus HOM04x5M002412 ORTHO04x5M002551 2.0e-40 169.5 309 40.5
Potri.T110800 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 9.8e-40 167.2 304 35.9
Potri.016G046900 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 3.7e-39 165.2 304 35.5
Zosma45g00520 Zostera marina HOM04x5M002412 ORTHO04x5M002551 1.8e-38 162.9 317 35.0
Solyc10g080470.1 Solanum lycopersicum HOM04x5M002412 ORTHO04x5M002551 3.1e-38 162.2 315 36.2
GSVIVG01033512001 Vitis vinifera HOM04x5M002412 ORTHO04x5M002551 4.2e-35 151.8 230 42.6
ATR0605G156 Amborella trichopoda HOM04x5M002412 ORTHO04x5M002551 5.5e-35 151.4 377 31.8
Oropetium_20150105_05499 Oropetium thomaeum HOM04x5M002412 ORTHO04x5M002551 8.0e-34 147.5 240 41.7
OB09G21400 Oryza brachyantha HOM04x5M002412 ORTHO04x5M002551 2.6e-32 142.5 392 34.7
PAB00042622 Picea abies HOM04x5M002412 ORTHO04x5M002551 5.4e-30 134.8 360 30.0
Zosma221g00080 Zostera marina HOM04x5M002412 ORTHO04x5M002551 2.7e-29 132.5 255 36.9
Seita.2G254800 Setaria italica HOM04x5M002412 ORTHO04x5M002551 5.0e-28 128.3 212 46.2
Pgl_GLEAN_10002438 Cenchrus americanus HOM04x5M002412 ORTHO04x5M002551 2.5e-27 125.9 160 61.9
Pp3c26_2720 Physcomitrium patens HOM04x5M002412 ORTHO04x5M002551 2.5e-27 125.9 151 48.3
Pp3c4_23000 Physcomitrium patens HOM04x5M002412 ORTHO04x5M002551 3.6e-26 122.1 145 49.0
Pgl_GLEAN_10009994 Cenchrus americanus HOM04x5M002412 ORTHO04x5M002551 6.1e-26 121.3 206 44.2
Zm00008a037452 Zea mays PH207 HOM04x5M002412 ORTHO04x5M002551 2.3e-25 119.4 225 42.7
ATR0049G071 Amborella trichopoda HOM04x5M002412 ORTHO04x5M002551 4.0e-25 118.6 382 28.8
p5.00_sc00002_p0114 Elaeis guineensis HOM04x5M002412 ORTHO04x5M002551 9.8e-24 114.0 311 29.6
gene10433 Selaginella moellendorffii HOM04x5M002412 ORTHO04x5M002551 3.2e-22 109.0 338 30.2
Mapoly0061s0112 Marchantia polymorpha HOM04x5M002412 ORTHO04x5M002551 7.0e-22 107.8 153 38.6
Spipo5G0060300 Spirodela polyrhiza HOM04x5M002412 ORTHO04x5M002551 1.7e-20 103.2 247 32.0
TRITD5Bv1G106560 Triticum turgidum HOM04x5M002412 ORTHO04x5M002551 1.1e-19 100.5 278 31.7
TraesCS5B02G170300 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 1.5e-19 100.1 278 31.7
HORVU5Hr1G053060 Hordeum vulgare HOM04x5M002412 ORTHO04x5M002551 5.6e-19 98.2 322 31.1
TraesCS5A02G172900 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 1.6e-18 96.7 279 31.5
TraesCS5D02G177400 Triticum aestivum HOM04x5M002412 ORTHO04x5M002551 2.8e-18 95.9 278 30.9
CALSI_Maker00040825 Calamus simplicifolius HOM04x5M002412 ORTHO04x5M002551 6.8e-17 91.3 100 47.0
Potri.003G088500 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 1.3e-15 87.0 351 26.5
GSVIVG01013169001 Vitis vinifera HOM04x5M002412 ORTHO04x5M002551 9.2e-14 80.9 330 26.1
evm.TU.AsparagusV1_04.1736.V1.1 Asparagus officinalis HOM04x5M002412 ORTHO04x5M002551 3.5e-13 79.0 243 29.6
Potri.001G145400 Populus trichocarpa HOM04x5M002412 ORTHO04x5M002551 3.5e-13 79.0 357 26.3
PH01000770G0030 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 6.6e-12 74.7 201 34.3
LOC_Os09g10690 Oryza sativa ssp. japonica HOM04x5M002412 ORTHO04x5M002551 1.9e-11 73.2 238 27.3
OsR498G0916902900.01 Oryza sativa ssp. indica HOM04x5M002412 ORTHO04x5M002551 1.9e-11 73.2 238 27.3
LOC_Os04g48600 Oryza sativa ssp. japonica HOM04x5M002412 ORTHO04x5M002551 5.6e-11 71.6 103 49.5
LOC_Os11g38450 Oryza sativa ssp. japonica HOM04x5M006374 ORTHO04x5M007929 5.8e-08 61.6 48 64.6
PH01001791G0500 Phyllostachys edulis HOM04x5M002412 ORTHO04x5M002551 2.2e-07 59.7 62 48.4

Amborella trichopoda (2 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (0 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (4 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (3 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (5 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (5 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (2 genes)
Picea abies (1 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (6 genes)
Selaginella moellendorffii (1 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (3 genes)
Triticum aestivum (9 genes)
Triticum turgidum (5 genes)
Vitis vinifera (2 genes)
Zea mays B73 (5 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (4 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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