Interactive Phylogenetics Module

Gene Id
TraesCS3A02G386000

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
TraesCS3A02G386000 Triticum aestivum HOM04x5M004644 ORTHO04x5M006208 3.6e-193 676.8 354 100.0
TRITD3Bv1G215430 Triticum turgidum HOM04x5M004644 ORTHO04x5M006208 2.6e-191 670.6 354 99.2
TraesCS3B02G418100 Triticum aestivum HOM04x5M004644 ORTHO04x5M006208 3.4e-191 670.2 353 99.2
TraesCS3D02G379000 Triticum aestivum HOM04x5M004644 ORTHO04x5M006208 9.8e-191 668.7 354 98.9
HORVU3Hr1G082010 Hordeum vulgare HOM04x5M004644 ORTHO04x5M006208 2.8e-190 667.2 332 99.1
TRITD3Av1G229430 Triticum turgidum HOM04x5M004644 ORTHO04x5M006208 4.0e-184 646.7 392 84.9
LP033748 Lolium perenne HOM04x5M004644 ORTHO04x5M006208 1.7e-158 561.6 335 82.1
Bradi2g56587 Brachypodium distachyon HOM04x5M004644 ORTHO04x5M006208 5.6e-154 546.6 335 79.7
OsR498G0102436000.01 Oryza sativa ssp. indica HOM04x5M004644 ORTHO04x5M006208 2.4e-144 514.6 337 75.4
PH01000066G0890 Phyllostachys edulis HOM04x5M004644 ORTHO04x5M006208 9.9e-143 509.2 362 71.0
Misin06G343000 Miscanthus sinensis HOM04x5M004644 ORTHO04x5M006208 6.4e-142 506.5 336 73.5
LOC_Os01g65450 Oryza sativa ssp. japonica HOM04x5M004644 ORTHO04x5M006208 6.4e-142 506.5 334 75.1
Sobic.003G374000 Sorghum bicolor HOM04x5M004644 ORTHO04x5M006208 7.1e-141 503.1 336 72.9
Seita.5G399100 Setaria italica HOM04x5M004644 ORTHO04x5M006208 9.3e-141 502.7 335 73.4
Sspon.03G0029040-1B Saccharum spontaneum HOM04x5M004644 ORTHO04x5M006208 9.3e-141 502.7 336 72.9
Sspon.03G0029040-2C Saccharum spontaneum HOM04x5M004644 ORTHO04x5M006208 2.7e-140 501.1 336 72.3
OB01G47770 Oryza brachyantha HOM04x5M004644 ORTHO04x5M006208 7.9e-140 499.6 338 73.4
Zm00001d012244 Zea mays B73 HOM04x5M004644 ORTHO04x5M006208 7.9e-140 499.6 336 72.6
Zm00007a00006289 Zea mays B104 HOM04x5M004644 ORTHO04x5M006208 7.9e-140 499.6 336 72.6
Sspon.03G0029040-1P Saccharum spontaneum HOM04x5M004644 ORTHO04x5M006208 1.8e-139 498.4 336 72.3
Zjn_sc00009.1.g04880.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004644 ORTHO04x5M006208 3.0e-139 497.7 337 74.2
Sspon.03G0029040-3D Saccharum spontaneum HOM04x5M004644 ORTHO04x5M006208 5.8e-135 483.4 370 65.9
Ma05_g28330 Musa acuminata HOM04x5M004644 ORTHO04x5M006208 5.7e-130 466.8 320 71.2
PEQU_24310 Phalaenopsis equestris HOM04x5M004644 ORTHO04x5M006208 9.6e-130 466.1 328 68.6
ASH_gene19373 Apostasia shenzhenica HOM04x5M004644 ORTHO04x5M006208 1.8e-128 461.8 323 70.3
p5.00_sc00051_p0030 Elaeis guineensis HOM04x5M004644 ORTHO04x5M006208 3.1e-128 461.1 318 70.8
CALSI_Maker00009075 Calamus simplicifolius HOM04x5M004644 ORTHO04x5M006208 4.1e-128 460.7 320 70.0
evm.TU.AsparagusV1_04.2746.V1.1 Asparagus officinalis HOM04x5M004644 ORTHO04x5M006208 1.0e-126 456.1 326 69.3
Potri.004G219300 Populus trichocarpa HOM04x5M004644 ORTHO04x5M006208 1.0e-126 456.1 318 69.8
AT4G06599 Arabidopsis thaliana HOM04x5M004644 ORTHO04x5M006208 9.3e-125 449.5 320 68.4
ATR1134G078 Amborella trichopoda HOM04x5M004644 ORTHO04x5M006208 3.5e-124 447.6 311 69.8
Potri.003G011300 Populus trichocarpa HOM04x5M004644 ORTHO04x5M006208 5.7e-122 440.3 322 66.8
Solyc01g103850.2 Solanum lycopersicum HOM04x5M004644 ORTHO04x5M006208 7.4e-122 439.9 308 68.8
Spipo7G0040900 Spirodela polyrhiza HOM04x5M004644 ORTHO04x5M006208 1.8e-120 435.3 315 67.9
Zosma182g00490 Zostera marina HOM04x5M004644 ORTHO04x5M006208 1.8e-120 435.3 317 68.1
gene16007 Selaginella moellendorffii HOM04x5M004644 ORTHO04x5M006208 1.0e-118 429.5 333 64.3
Zm00008a032799 Zea mays PH207 HOM04x5M004644 ORTHO04x5M006208 1.1e-114 416.0 336 64.0
gene3696 Selaginella moellendorffii HOM04x5M004644 ORTHO04x5M006208 1.5e-114 415.6 358 59.8
Aco011257 Ananas comosus HOM04x5M004644 ORTHO04x5M006208 2.9e-110 401.4 376 57.2
Mapoly0019s0035 Marchantia polymorpha HOM04x5M004644 ORTHO04x5M006208 3.9e-107 391.0 322 60.6
Misin05G348100 Miscanthus sinensis HOM04x5M004644 ORTHO04x5M006208 3.7e-105 384.4 250 73.6
Pp3c1_27970 Physcomitrium patens HOM04x5M004644 ORTHO04x5M006208 2.0e-103 378.6 326 58.3
GSVIVG01023290001 Vitis vinifera HOM04x5M004644 ORTHO04x5M006208 2.5e-101 371.7 247 71.7
Pgl_GLEAN_10031678 Cenchrus americanus HOM04x5M004644 ORTHO04x5M006208 3.2e-101 371.3 247 73.7
Oropetium_20150105_12951 Oropetium thomaeum HOM04x5M004644 ORTHO04x5M006208 1.5e-85 319.3 194 79.9
MCO16G506 Micromonas commoda HOM04x5M004644 ORTHO04x5M006208 1.8e-83 312.4 323 54.2
PAB00053683 Picea abies HOM04x5M004644 ORTHO04x5M006208 2.3e-75 285.4 207 68.1
Zm00007a00031369 Zea mays B104 HOM04x5M004644 ORTHO04x5M006208 2.3e-70 268.9 274 55.5
Cre04.g228900 Chlamydomonas reinhardtii HOM04x5M004644 ORTHO04x5M006208 1.3e-62 243.0 264 48.5
PH01001343G0360 Phyllostachys edulis HOM04x5M004644 ORTHO04x5M006208 2.8e-52 208.8 133 77.4
Zm00008a013168 Zea mays PH207 HOM04x5M004644 ORTHO04x5M030161 2.6e-50 202.2 223 51.1
PH01001343G0330 Phyllostachys edulis HOM04x5M004644 ORTHO04x5M006208 4.2e-40 168.3 200 48.5
OB01G47800 Oryza brachyantha HOM04x5M004644 ORTHO04x5M006208 6.6e-38 161.0 121 66.9
Potri.003G014300 Populus trichocarpa HOM04x5M004644 ORTHO04x5M006208 9.6e-29 130.6 128 54.7
Zm00001d042657 Zea mays B73 HOM04x5M004644 ORTHO04x5M030161 1.4e-24 116.7 159 44.7
Potri.003G011732 Populus trichocarpa HOM04x5M004644 ORTHO04x5M019185 4.6e-23 111.7 86 62.8
Pgl_GLEAN_10031677 Cenchrus americanus HOM04x5M004644 ORTHO04x5M006208 1.5e-21 106.7 74 73.0
Oropetium_20150105_12952 Oropetium thomaeum HOM04x5M004644 ORTHO04x5M006208 4.5e-18 95.1 73 64.4
Potri.019G044700 Populus trichocarpa HOM04x5M004644 ORTHO04x5M019185 7.9e-15 84.3 52 75.0
PAB00042164 Picea abies HOM04x5M004644 ORTHO04x5M006208 3.0e-14 82.4 74 60.8
Solyc01g058590.1 Solanum lycopersicum HOM04x5M004644 ORTHO04x5M006208 1.1e-11 73.9 122 39.3
gene20205 Selaginella moellendorffii HOM04x5M000790 ORTHO04x5M205071 5.5e-08 61.6 170 29.4
gene11376 Selaginella moellendorffii HOM04x5M012937 ORTHO04x5M208684 2.1e-07 59.7 170 28.8
gene37166 Selaginella moellendorffii HOM04x5M000790 ORTHO04x5M002987 5.1e-06 55.1 182 27.5
gene28453 Selaginella moellendorffii HOM04x5M000790 ORTHO04x5M002987 6.7e-06 54.7 207 27.1
gene27292 Selaginella moellendorffii HOM04x5M000790 ORTHO04x5M002987 8.7e-06 54.3 207 26.6

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (1 genes)
Picea abies (2 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (7 genes)
Setaria italica (1 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (2 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings