Interactive Phylogenetics Module

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
TRITD3Bv1G242080 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 2.7e-198 694.5 578 100.0
TraesCS3B02G476100 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 3.1e-194 681.0 578 99.3
TraesCS3A02G442300 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 7.0e-186 653.3 578 96.5
TRITD3Av1G250250 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 7.0e-186 653.3 578 96.5
TraesCS3D02G435000 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 2.1e-182 641.7 578 95.8
HORVU3Hr1G096450 Hordeum vulgare HOM04x5M001523 ORTHO04x5M001589 1.3e-176 622.5 473 94.5
LP009590 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 4.2e-159 564.3 573 89.7
LOC_Os01g70320 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 1.4e-157 559.3 468 89.3
OB01G51640 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 5.7e-156 553.9 467 88.2
Bradi2g59510 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 3.1e-154 548.1 579 88.6
Misin05G403900 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 5.4e-146 520.8 473 85.0
Sobic.003G412300 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 1.4e-141 506.1 473 83.3
Seita.5G438400 Setaria italica HOM04x5M001523 ORTHO04x5M001589 4.0e-141 504.6 467 84.6
Sspon.03G0027700-2C Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 9.8e-140 500.0 473 82.5
Sspon.03G0027700-1P Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 2.1e-134 482.3 461 82.4
Aco015077 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 2.3e-120 435.6 453 76.8
Misin06G371400 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 3.2e-114 415.2 245 86.9
p5.00_sc01766_p0001 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 6.2e-110 401.0 452 72.1
p5.00_sc00057_p0063 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 2.2e-107 392.5 464 71.1
ASH_gene19761 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M001589 1.9e-106 389.4 485 63.1
Zm00007a00002495 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 2.7e-105 385.6 473 69.6
Oropetium_20150105_09846 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 4.6e-105 384.8 235 84.7
GSVIVG01004935001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 5.8e-100 367.9 453 58.5
CALSI_Maker00037144 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 3.2e-98 362.1 528 61.4
Potri.015G104600 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 7.9e-97 357.5 458 63.5
GSVIVG01008631001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 1.3e-96 356.7 446 63.7
Ma09_g01020 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 3.0e-96 355.5 443 58.2
Ma04_g00060 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 2.5e-95 352.4 463 68.7
PEQU_07858 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 2.5e-95 352.4 287 69.3
ATR0582G200 Amborella trichopoda HOM04x5M001523 ORTHO04x5M001589 7.4e-95 350.9 246 69.5
Aco006674 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 2.8e-94 349.0 273 65.9
Potri.012G105400 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 2.8e-94 349.0 437 65.2
Zosma69g00810 Zostera marina HOM04x5M001523 ORTHO04x5M001589 2.6e-92 342.4 463 55.7
Potri.001G065800 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 5.8e-92 341.3 243 68.3
CALSI_Maker00016663 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 7.6e-92 340.9 471 61.1
Pgl_GLEAN_10000952 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 1.3e-91 340.1 409 75.1
Solyc03g118390.2 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 1.7e-91 339.7 453 45.5
Potri.003G164100 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 7.1e-90 334.3 245 66.9
Zjn_sc00009.1.g01850.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 2.1e-89 332.8 460 64.6
Spipo4G0061800 Spirodela polyrhiza HOM04x5M001523 ORTHO04x5M001589 3.5e-89 332.0 244 68.0
CALSI_Maker00018832 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 2.3e-88 329.3 548 51.1
PEQU_08641 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 5.1e-88 328.2 281 58.7
Zosma27g00300 Zostera marina HOM04x5M001523 ORTHO04x5M001589 2.4e-85 319.3 242 65.7
Seita.8G134100 Setaria italica HOM04x5M001523 ORTHO04x5M001589 4.2e-82 308.5 243 61.7
TraesCS4A02G192600 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 7.2e-82 307.8 253 59.3
TRITD4Av1G154160 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 7.2e-82 307.8 253 59.3
PH01000002G3240 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 9.4e-82 307.4 238 70.2
HORVU4Hr1G023390 Hordeum vulgare HOM04x5M001523 ORTHO04x5M001589 1.6e-81 306.6 245 60.4
AT3G48860 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 2.1e-81 306.2 457 57.8
Aco027227 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 2.7e-81 305.8 264 59.8
OB11G21770 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 3.6e-81 305.4 243 60.5
Bradi4g17917 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 4.6e-81 305.1 253 59.3
LOC_Os11g31950 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 2.3e-80 302.8 241 61.0
LP038183 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 3.0e-80 302.4 244 61.1
TraesCS4B02G122700 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 3.0e-80 302.4 253 58.1
TRITD4Bv1G050480 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 3.0e-80 302.4 253 58.1
TraesCS4D02G120700 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 5.1e-80 301.6 253 58.1
Oropetium_20150105_21536 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 2.0e-79 299.7 243 61.7
gene4642 Selaginella moellendorffii HOM04x5M001523 ORTHO04x5M001589 2.5e-79 299.3 243 62.6
gene16812 Selaginella moellendorffii HOM04x5M001523 ORTHO04x5M001589 2.5e-79 299.3 243 62.6
ATR0706G100 Amborella trichopoda HOM04x5M001523 ORTHO04x5M001589 2.2e-78 296.2 465 60.4
Misin10G109400 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 6.3e-78 294.7 253 58.9
Sobic.005G129400 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 6.3e-78 294.7 254 58.7
Misin09G134700 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 8.2e-78 294.3 245 60.0
Zm00008a012853 Zea mays PH207 HOM04x5M001523 ORTHO04x5M001589 1.1e-77 293.9 167 88.0
Zm00001d049273 Zea mays B73 HOM04x5M001523 ORTHO04x5M001589 1.2e-76 290.4 253 56.9
AT4G25070 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 2.0e-76 289.7 245 58.4
AT5G13260 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 2.0e-76 289.7 237 62.0
Sspon.06G0014630-1A Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 2.0e-76 289.7 235 61.3
Sspon.06G0014630-3C Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 3.4e-76 288.9 235 60.0
Pgl_GLEAN_10004734 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 1.0e-75 287.3 231 60.6
Pp3c19_9680 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 2.9e-75 285.8 251 61.0
AT5G23700 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 1.2e-73 280.4 450 60.4
Aco007293 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 1.6e-73 280.0 242 59.9
Pp3c22_21290 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 6.1e-73 278.1 251 58.6
Pp3c22_21255 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 6.1e-73 278.1 251 58.6
Potri.005G044600 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 6.1e-73 278.1 251 57.4
Sspon.06G0014630-2B Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 4.4e-71 271.9 302 50.0
Spipo7G0049800 Spirodela polyrhiza HOM04x5M001523 ORTHO04x5M001589 9.7e-71 270.8 247 57.5
Zm00007a00011305 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 2.4e-69 266.2 253 54.2
AT4G08630 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 4.1e-69 265.4 246 53.7
Ma02_g03510 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 1.5e-68 263.5 232 57.8
Sspon.06G0014630-4D Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 5.0e-67 258.5 232 56.9
evm.TU.AsparagusV1_02.2052.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 8.5e-67 257.7 454 40.1
Mapoly0101s0059 Marchantia polymorpha HOM04x5M001523 ORTHO04x5M001589 1.5e-66 256.9 254 52.4
Zm00001d042262 Zea mays B73 HOM04x5M000360 ORTHO04x5M000256 6.7e-64 248.1 282 53.5
Pp3c19_10380 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 2.6e-63 246.1 246 53.3
LP007813 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 3.3e-63 245.7 245 53.9
TraesCS1A02G102200 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 4.4e-63 245.4 246 54.5
TRITD1Av1G041990 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 4.4e-63 245.4 246 54.5
Bradi2g36005 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 9.7e-63 244.2 246 52.8
TraesCS1D02G093800 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 4.8e-62 241.9 246 53.7
Sspon.07G0013220-2B Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.1e-61 240.7 246 50.8
Sspon.07G0013220-1T Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.1e-61 240.7 246 50.8
TraesCS1B02G112600 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 1.4e-61 240.4 246 53.3
TRITD1Bv1G044830 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 1.4e-61 240.4 246 53.3
Misin17G049700 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 4.1e-61 238.8 246 50.8
Seita.3G038900 Setaria italica HOM04x5M001523 ORTHO04x5M001589 7.0e-61 238.0 246 52.0
Misin16G054100 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 1.2e-60 237.3 246 50.4
Sobic.009G042800 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 2.2e-59 233.0 238 51.3
LOC_Os05g05580 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 5.5e-58 228.4 247 51.8
Zm00007a00006561 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 2.7e-57 226.1 243 50.2
Oropetium_20150105_15532 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 1.0e-56 224.2 232 53.0
Pgl_GLEAN_10000785 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 1.3e-54 217.2 160 71.9
Zm00008a037492 Zea mays PH207 HOM04x5M001523 ORTHO04x5M001589 1.1e-53 214.2 235 49.8
Sspon.07G0013220-1A Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 4.1e-53 212.2 242 48.8
PH01002160G0270 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 1.6e-52 210.3 346 72.3
CALSI_Maker00048189 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 1.0e-51 207.6 234 49.6
GSVIVG01021962001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 4.2e-50 202.2 201 55.2
Zjn_sc00034.1.g02320.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 4.7e-49 198.7 129 77.5
PAB00042674 Picea abies HOM04x5M001523 ORTHO04x5M001589 4.0e-48 195.7 144 69.4
OsR498G0102629600.01 Oryza sativa ssp. indica HOM04x5M001523 ORTHO04x5M001589 3.4e-47 192.6 259 87.6
Mapoly0013s0021 Marchantia polymorpha HOM04x5M001523 ORTHO04x5M001589 4.4e-47 192.2 228 45.2
OB05G13160 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 9.8e-47 191.0 260 43.8
OsR498G1120235900.01 Oryza sativa ssp. indica HOM04x5M001523 ORTHO04x5M001589 2.4e-45 186.4 161 58.4
Zosma5g01040 Zostera marina HOM04x5M001523 ORTHO04x5M001589 1.2e-44 184.1 225 44.4
evm.TU.AsparagusV1_09.1475.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 9.5e-42 174.5 117 65.8
evm.TU.AsparagusV1_04.1549.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 2.0e-36 156.8 146 58.9
p5.00_sc00211_p0001 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 9.8e-31 137.9 171 46.8
Solyc05g023770.2 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 3.7e-30 136.0 272 52.9
Solyc10g037930.1 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 4.9e-30 135.6 152 48.7
Sspon.03G0027700-1B Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 5.4e-29 132.1 90 83.3
evm.TU.AsparagusV1_Unassigned.393.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 1.0e-27 127.9 72 86.1
PEQU_04259 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 1.7e-27 127.1 124 58.1
Zjn_sc00186.1.g00130.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 1.9e-26 123.6 205 38.0
OsR498G0509736400.01 Oryza sativa ssp. indica HOM04x5M001523 ORTHO04x5M001589 3.1e-24 116.3 114 56.1
PH01002160G0250 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 8.9e-24 114.8 58 89.7
Pgl_GLEAN_10003497 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 1.1e-21 107.8 124 50.0
Aco021763 Ananas comosus HOM04x5M001523 ORTHO04x5M009652 4.6e-20 102.4 72 63.9
ASH_gene8570 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M001589 9.5e-18 94.7 107 50.5
Cre03.g161578 Chlamydomonas reinhardtii HOM04x5M001523 ORTHO04x5M001589 3.1e-16 89.7 248 28.6
PAB00048619 Picea abies HOM04x5M001523 ORTHO04x5M001589 4.4e-15 85.9 107 48.6
MCO12G428 Micromonas commoda HOM04x5M001523 ORTHO04x5M001589 1.1e-13 81.3 247 27.9
Aco028088 Ananas comosus HOM04x5M000382 ORTHO04x5M000270 2.1e-12 77.0 79 45.6
PAB00006093 Picea abies HOM04x5M001523 ORTHO04x5M001589 2.7e-12 76.6 62 54.8
GSVIVG01021965001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 3.3e-10 69.7 38 84.2
PEQU_07861 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 5.2e-08 62.4 92 52.2
PH01083440G0010 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 8.9e-08 61.6 50 56.0
ASH_gene8524 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M001589 7.6e-07 58.5 38 65.8

Amborella trichopoda (2 genes)
Ananas comosus (6 genes)
Apostasia shenzhenica (3 genes)
Arabidopsis thaliana (5 genes)
Asparagus officinalis (4 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (4 genes)
Cenchrus americanus (4 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (2 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (4 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (4 genes)
Picea abies (3 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (4 genes)
Zea mays B73 (2 genes)
Zea mays B104 (3 genes)
Zea mays PH207 (2 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (3 genes)