Interactive Phylogenetics Module

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Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sspon.07G0013220-1A Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.0e-244 848.6 522 100.0
Sspon.07G0013220-1T Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 3.1e-217 757.3 585 85.5
Sspon.07G0013220-2B Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.7e-215 751.5 580 85.3
Misin17G049700 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 3.2e-214 747.3 580 85.2
Zm00007a00006561 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 5.3e-209 729.9 556 83.8
Misin16G054100 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 4.5e-208 726.9 584 83.7
Sobic.009G042800 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 9.0e-201 702.6 586 80.9
Seita.3G038900 Setaria italica HOM04x5M001523 ORTHO04x5M001589 2.0e-192 674.9 585 77.4
Zm00008a037492 Zea mays PH207 HOM04x5M001523 ORTHO04x5M001589 1.7e-186 655.2 425 83.5
Oropetium_20150105_15532 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 3.5e-168 594.3 548 73.7
LOC_Os05g05580 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 1.7e-154 548.9 432 69.4
Bradi2g36005 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 1.9e-142 508.8 590 64.9
LP007813 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 8.9e-140 500.0 475 63.2
TraesCS1D02G093800 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 5.4e-137 490.7 578 64.7
TraesCS1B02G112600 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 9.2e-137 490.0 578 64.5
TRITD1Bv1G044830 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 9.2e-137 490.0 578 64.5
TRITD1Av1G041990 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 7.8e-136 486.9 575 64.3
Zm00001d024833 Zea mays B73 HOM04x5M001523 ORTHO04x5M001589 8.4e-114 413.7 342 85.7
TraesCS1A02G102200 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 5.4e-113 411.0 402 60.9
Sspon.07G0013220-3D Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.2e-99 366.7 319 89.0
OB05G13160 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 9.3e-97 357.1 418 55.5
evm.TU.AsparagusV1_02.2052.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 4.2e-81 305.1 464 43.8
Pgl_GLEAN_10003497 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 2.2e-74 282.7 268 64.2
Aco007293 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 4.6e-72 275.0 449 42.3
Ma02_g03510 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 3.8e-66 255.4 222 59.9
Solyc03g118390.2 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 9.7e-62 240.7 459 37.3
p5.00_sc01766_p0001 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 2.0e-59 233.0 232 55.6
Potri.005G044600 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 4.5e-59 231.9 230 54.8
Zosma27g00300 Zostera marina HOM04x5M001523 ORTHO04x5M001589 1.3e-58 230.3 235 53.6
ATR0582G200 Amborella trichopoda HOM04x5M001523 ORTHO04x5M001589 1.7e-58 229.9 241 53.5
GSVIVG01004935001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 8.5e-58 227.6 447 36.0
p5.00_sc00057_p0063 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 2.5e-57 226.1 232 54.7
Ma09_g01020 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 4.2e-57 225.3 440 36.8
ATR0706G100 Amborella trichopoda HOM04x5M001523 ORTHO04x5M001589 5.5e-57 224.9 239 51.9
PEQU_07858 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 9.4e-57 224.2 230 51.3
gene4642 Selaginella moellendorffii HOM04x5M001523 ORTHO04x5M001589 1.6e-56 223.4 243 50.6
LP009590 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 3.6e-56 222.2 235 51.5
gene16812 Selaginella moellendorffii HOM04x5M001523 ORTHO04x5M001589 3.6e-56 222.2 243 50.2
PEQU_08641 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 8.0e-56 221.1 232 51.3
Potri.001G065800 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 1.0e-55 220.7 263 48.3
Aco015077 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 1.4e-55 220.3 243 50.2
GSVIVG01008631001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 2.3e-55 219.5 259 50.2
AT4G08630 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 5.2e-55 218.4 296 44.6
Bradi2g59510 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 6.7e-55 218.0 236 51.3
LOC_Os01g70320 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 6.7e-55 218.0 236 51.3
Ma04_g00060 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 8.8e-55 217.6 229 55.9
Pp3c22_21290 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 2.0e-54 216.5 234 50.4
Pp3c22_21255 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 2.0e-54 216.5 234 50.4
CALSI_Maker00048189 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 3.3e-54 215.7 219 54.8
Aco006674 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 5.7e-54 214.9 266 47.0
OB01G51640 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 7.5e-54 214.5 243 49.8
ASH_gene19761 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M001589 9.7e-54 214.2 245 49.4
Pgl_GLEAN_10004734 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 9.7e-54 214.2 325 40.0
Sobic.003G412300 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 9.7e-54 214.2 231 50.6
Zosma69g00810 Zostera marina HOM04x5M001523 ORTHO04x5M001589 1.3e-53 213.8 236 50.0
Misin05G403900 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 2.2e-53 213.0 231 50.2
Seita.5G438400 Setaria italica HOM04x5M001523 ORTHO04x5M001589 2.2e-53 213.0 234 50.4
Misin06G371400 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 4.8e-53 211.8 231 49.8
Potri.012G105400 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 8.2e-53 211.1 291 43.0
Potri.015G104600 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 8.2e-53 211.1 287 43.9
Pp3c19_9680 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 1.1e-52 210.7 235 48.9
Pp3c19_10380 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 1.4e-52 210.3 462 35.1
Seita.8G134100 Setaria italica HOM04x5M001523 ORTHO04x5M001589 1.4e-52 210.3 459 33.6
Potri.003G164100 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 1.8e-52 209.9 287 46.0
HORVU3Hr1G096450 Hordeum vulgare HOM04x5M001523 ORTHO04x5M001589 3.1e-52 209.1 237 49.8
TraesCS3B02G476100 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 3.1e-52 209.1 239 50.2
TraesCS3A02G442300 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 3.1e-52 209.1 242 49.2
TRITD3Av1G250250 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 3.1e-52 209.1 242 49.2
TraesCS3D02G435000 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 5.3e-52 208.4 237 49.8
Sspon.06G0014630-4D Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 7.0e-52 208.0 422 35.1
Oropetium_20150105_09846 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 9.1e-52 207.6 236 49.6
TRITD3Bv1G242080 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 9.1e-52 207.6 242 48.8
Spipo4G0061800 Spirodela polyrhiza HOM04x5M001523 ORTHO04x5M001589 1.2e-51 207.2 232 51.7
Sspon.03G0027700-2C Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.2e-51 207.2 231 50.6
Bradi4g17917 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 2.0e-51 206.5 317 40.4
Aco027227 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 4.5e-51 205.3 247 49.4
Sspon.06G0014630-3C Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 4.5e-51 205.3 232 47.4
Misin10G109400 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 7.7e-51 204.5 438 34.5
Misin09G134700 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 1.7e-50 203.4 449 33.9
OB11G21770 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 1.7e-50 203.4 307 39.1
Sspon.03G0027700-1P Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.7e-50 203.4 225 51.6
Zm00001d049273 Zea mays B73 HOM04x5M001523 ORTHO04x5M001589 1.7e-50 203.4 456 34.0
TraesCS4A02G192600 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 2.2e-50 203.0 305 41.0
TRITD4Av1G154160 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 2.2e-50 203.0 305 41.0
Zm00007a00011305 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 2.2e-50 203.0 450 34.2
HORVU4Hr1G023390 Hordeum vulgare HOM04x5M001523 ORTHO04x5M001589 2.9e-50 202.6 319 40.4
LOC_Os11g31950 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 3.8e-50 202.2 305 39.7
TraesCS4B02G122700 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 5.0e-50 201.8 305 41.0
TRITD4Bv1G050480 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 5.0e-50 201.8 305 41.0
LP038183 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 6.5e-50 201.4 307 41.4
Oropetium_20150105_21536 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 6.5e-50 201.4 455 33.2
Sobic.005G129400 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 8.5e-50 201.1 449 33.6
Sspon.06G0014630-1A Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.5e-49 200.3 428 34.6
AT5G13260 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 1.9e-49 199.9 272 45.6
Mapoly0101s0059 Marchantia polymorpha HOM04x5M001523 ORTHO04x5M001589 2.5e-49 199.5 227 48.5
TraesCS4D02G120700 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 2.5e-49 199.5 305 40.7
CALSI_Maker00037144 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 7.2e-49 198.0 310 41.3
AT4G25070 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 9.4e-49 197.6 231 46.3
AT3G48860 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 3.6e-48 195.7 280 43.9
CALSI_Maker00018832 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 2.3e-47 193.0 283 42.0
AT5G23700 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 4.4e-46 188.7 266 46.6
Sspon.06G0014630-2B Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 2.7e-43 179.5 496 31.0
GSVIVG01021962001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 3.5e-43 179.1 189 52.9
Spipo7G0049800 Spirodela polyrhiza HOM04x5M001523 ORTHO04x5M001589 1.0e-42 177.6 241 45.6
CALSI_Maker00016663 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 1.9e-41 173.3 278 39.9
Zosma5g01040 Zostera marina HOM04x5M001523 ORTHO04x5M001589 2.8e-40 169.5 224 43.8
PH01000002G3240 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 5.2e-39 165.2 230 43.5
Zjn_sc00009.1.g01850.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 1.1e-36 157.5 227 41.9
Zm00007a00002495 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 1.8e-36 156.8 186 46.2
Zm00008a012853 Zea mays PH207 HOM04x5M001523 ORTHO04x5M001589 1.8e-36 156.8 186 46.2
Mapoly0013s0021 Marchantia polymorpha HOM04x5M001523 ORTHO04x5M001589 5.0e-34 148.7 223 39.0
Pgl_GLEAN_10000952 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 1.6e-32 143.7 164 48.2
OsR498G0509736400.01 Oryza sativa ssp. indica HOM04x5M001523 ORTHO04x5M001589 4.7e-32 142.1 121 64.5
p5.00_sc00211_p0001 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 4.9e-29 132.1 137 53.3
evm.TU.AsparagusV1_09.1475.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 4.6e-27 125.6 114 54.4
PH01000258G0390 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 3.9e-26 122.5 87 80.5
Zjn_sc00034.1.g02320.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 3.9e-26 122.5 197 39.6
PAB00042674 Picea abies HOM04x5M001523 ORTHO04x5M001589 3.6e-24 115.9 218 41.7
Solyc10g037930.1 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 1.0e-23 114.4 136 49.3
Zjn_sc00186.1.g00130.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 1.0e-23 114.4 91 56.0
Zm00001d042262 Zea mays B73 HOM04x5M000360 ORTHO04x5M000256 1.0e-23 114.4 282 30.5
Pgl_GLEAN_10000785 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 3.4e-22 109.4 86 59.3
OsR498G1120235900.01 Oryza sativa ssp. indica HOM04x5M001523 ORTHO04x5M001589 5.8e-22 108.6 199 35.7
evm.TU.AsparagusV1_04.1549.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 1.1e-20 104.4 130 49.2
PEQU_04259 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 5.0e-18 95.5 113 50.4
ASH_gene8570 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M001589 2.3e-15 86.7 90 52.2
PH01002160G0250 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 6.4e-13 78.6 58 60.3
MCO12G428 Micromonas commoda HOM04x5M001523 ORTHO04x5M001589 3.2e-12 76.3 135 31.9
PAB00006093 Picea abies HOM04x5M001523 ORTHO04x5M001589 4.6e-11 72.4 61 52.5
p5.00_sc00211_p0002 Elaeis guineensis HOM04x5M001523 ORTHO04x5M016727 6.0e-11 72.0 120 46.7
Aco021763 Ananas comosus HOM04x5M001523 ORTHO04x5M009652 2.3e-10 70.1 61 55.7
Aco028088 Ananas comosus HOM04x5M000382 ORTHO04x5M000270 8.6e-10 68.2 79 46.8
ASH_gene8571 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M016727 9.5e-09 64.7 115 47.0
evm.TU.AsparagusV1_Unassigned.393.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 1.1e-07 61.2 67 49.3
Solyc05g023770.2 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 5.2e-07 58.9 280 25.7
PAB00048619 Picea abies HOM04x5M001523 ORTHO04x5M001589 3.4e-06 56.2 107 39.3

Amborella trichopoda (2 genes)
Ananas comosus (6 genes)
Apostasia shenzhenica (3 genes)
Arabidopsis thaliana (5 genes)
Asparagus officinalis (4 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (4 genes)
Cenchrus americanus (4 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (4 genes)
Hordeum vulgare (2 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (3 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (4 genes)
Picea abies (3 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (10 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (3 genes)
Zea mays B73 (3 genes)
Zea mays B104 (3 genes)
Zea mays PH207 (2 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (3 genes)