Interactive Phylogenetics Module

Gene Id
Sspon.03G0028620-2C

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sspon.03G0028620-2C Saccharum spontaneum HOM04x5M005382 ORTHO04x5M006527 0.0e+00 1251.9 849 100.0
Sobic.003G394300 Sorghum bicolor HOM04x5M005382 ORTHO04x5M006527 1.5e-282 974.9 850 69.2
Misin06G362700 Miscanthus sinensis HOM04x5M005382 ORTHO04x5M006527 2.0e-282 974.5 849 69.6
Zm00001d042450 Zea mays B73 HOM04x5M005382 ORTHO04x5M006527 4.9e-273 943.3 849 67.4
Zm00007a00017129 Zea mays B104 HOM04x5M005382 ORTHO04x5M006527 4.9e-273 943.3 849 67.4
Seita.5G420200 Setaria italica HOM04x5M005382 ORTHO04x5M006527 4.6e-255 883.6 851 64.6
Pgl_GLEAN_10010471 Cenchrus americanus HOM04x5M005382 ORTHO04x5M006527 9.1e-251 869.4 795 62.9
Zm00008a013007 Zea mays PH207 HOM04x5M005382 ORTHO04x5M006527 8.0e-239 829.7 795 61.4
Bradi2g58077 Brachypodium distachyon HOM04x5M005382 ORTHO04x5M006527 1.7e-217 758.8 852 56.9
LP034953 Lolium perenne HOM04x5M005382 ORTHO04x5M006527 2.2e-212 741.9 794 55.5
PH01000229G0250 Phyllostachys edulis HOM04x5M005382 ORTHO04x5M006527 2.9e-204 714.9 795 54.2
Misin06G412600 Miscanthus sinensis HOM04x5M005382 ORTHO04x5M006527 1.9e-203 712.2 714 63.2
OsR498G0102541400.01 Oryza sativa ssp. indica HOM04x5M005382 ORTHO04x5M006527 1.2e-199 699.5 837 52.8
OB01G49790 Oryza brachyantha HOM04x5M005382 ORTHO04x5M006527 8.9e-198 693.3 795 52.7
TraesCS3A02G390800 Triticum aestivum HOM04x5M005382 ORTHO04x5M006527 3.4e-197 691.4 854 53.2
TraesCS3B02G422600 Triticum aestivum HOM04x5M005382 ORTHO04x5M006527 1.4e-195 686.0 853 52.8
HORVU3Hr1G088460 Hordeum vulgare HOM04x5M005382 ORTHO04x5M006527 4.1e-195 684.5 855 52.9
TraesCS3D02G383400 Triticum aestivum HOM04x5M005382 ORTHO04x5M006527 6.0e-194 680.6 796 51.3
Aco024203 Ananas comosus HOM04x5M005382 ORTHO04x5M006527 5.1e-193 677.6 789 49.3
HORVU3Hr1G088480 Hordeum vulgare HOM04x5M005382 ORTHO04x5M006527 3.3e-192 674.9 796 51.3
TRITD3Av1G230650 Triticum turgidum HOM04x5M005382 ORTHO04x5M006527 1.4e-190 669.5 815 50.3
TRITD3Bv1G217010 Triticum turgidum HOM04x5M005382 ORTHO04x5M006527 1.1e-187 659.8 855 51.6
LOC_Os01g67920 Oryza sativa ssp. japonica HOM04x5M005382 ORTHO04x5M006527 8.4e-172 607.1 738 50.4
Oropetium_20150105_13135 Oropetium thomaeum HOM04x5M005382 ORTHO04x5M006527 3.6e-167 591.7 662 53.8
Ma08_g08710 Musa acuminata HOM04x5M005382 ORTHO04x5M006527 5.8e-165 584.3 844 41.9
evm.TU.AsparagusV1_04.597.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 2.7e-162 575.5 841 41.7
PEQU_32184 Phalaenopsis equestris HOM04x5M005382 ORTHO04x5M006527 1.0e-156 557.0 789 42.0
PH01000031G1370 Phyllostachys edulis HOM04x5M005382 ORTHO04x5M006527 7.6e-149 530.8 806 45.5
Sspon.03G0028540-1B Saccharum spontaneum HOM04x5M000049 ORTHO04x5M006527 2.9e-148 528.9 377 85.4
Solyc06g071850.2 Solanum lycopersicum HOM04x5M005382 ORTHO04x5M006527 1.4e-147 526.6 761 41.9
GSVIVG01007574001 Vitis vinifera HOM04x5M005382 ORTHO04x5M006527 4.2e-139 498.4 820 39.1
ATR0824G019 Amborella trichopoda HOM04x5M005382 ORTHO04x5M006527 5.5e-139 498.0 871 38.3
CALSI_Maker00005234 Calamus simplicifolius HOM04x5M005382 ORTHO04x5M006527 1.3e-124 450.3 745 39.6
Zosma79g00200 Zostera marina HOM04x5M005382 ORTHO04x5M006527 5.0e-116 421.8 735 37.1
p5.00_sc00130_p0062 Elaeis guineensis HOM04x5M005382 ORTHO04x5M006527 4.2e-115 418.7 831 35.7
Potri.012G092000 Populus trichocarpa HOM04x5M005382 ORTHO04x5M006527 4.4e-112 408.7 767 36.0
AT5G63200 Arabidopsis thaliana HOM04x5M005382 ORTHO04x5M006527 7.0e-110 401.4 872 33.9
Mapoly0013s0178 Marchantia polymorpha HOM04x5M005382 ORTHO04x5M006527 8.3e-95 351.3 774 32.3
gene5094 Selaginella moellendorffii HOM04x5M005382 ORTHO04x5M006527 8.3e-95 351.3 759 32.8
gene7444 Selaginella moellendorffii HOM04x5M005382 ORTHO04x5M006527 8.3e-95 351.3 759 32.8
ASH_gene1600 Apostasia shenzhenica HOM04x5M005382 ORTHO04x5M006527 1.6e-85 320.5 699 32.5
Spipo4G0035200 Spirodela polyrhiza HOM04x5M005382 ORTHO04x5M006527 6.8e-81 305.1 238 63.0
Sspon.03G0000770-2B Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 9.8e-80 301.2 150 98.7
Spipo4G0035300 Spirodela polyrhiza HOM04x5M005382 ORTHO04x5M006527 2.5e-59 233.4 269 49.4
Oropetium_20150105_13136 Oropetium thomaeum HOM04x5M005382 ORTHO04x5M006527 7.4e-43 178.7 124 78.2
PAB00064933 Picea abies HOM04x5M005382 ORTHO04x5M006527 1.3e-39 167.9 157 57.3
Zjn_sc00034.1.g03860.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005382 ORTHO04x5M006527 8.7e-36 155.2 265 47.2
PAB00061745 Picea abies HOM04x5M005382 ORTHO04x5M006527 4.2e-30 136.3 122 56.6
Sspon.03G0028620-1B Saccharum spontaneum HOM04x5M005382 ORTHO04x5M006527 4.2e-30 136.3 103 100.0
evm.TU.AsparagusV1_05.2410.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 7.9e-29 132.1 104 58.7
evm.TU.AsparagusV1_08.1960.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 1.8e-28 131.0 104 57.7
PAB00026557 Picea abies HOM04x5M005382 ORTHO04x5M006527 8.7e-28 128.6 111 56.8
evm.TU.AsparagusV1_08.2080.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 9.7e-27 125.2 98 57.1
p5.00_sc00032_p0014 Elaeis guineensis HOM04x5M005382 ORTHO04x5M006527 1.5e-24 117.9 82 72.0
PAB00034029 Picea abies HOM04x5M005382 ORTHO04x5M006527 1.4e-17 94.7 80 56.2
p5.00_sc00032_p0015 Elaeis guineensis HOM04x5M005382 ORTHO04x5M006527 2.9e-15 87.0 67 58.2
Sspon.08G0028250-1D Saccharum spontaneum HOM04x5M025626 ORTHO04x5M217284 4.1e-09 66.6 113 90.3
Sspon.02G0039980-1B Saccharum spontaneum HOM04x5M025626 ORTHO04x5M217517 6.5e-07 59.3 110 88.2

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (4 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (0 genes)
Picea abies (4 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (6 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings