Interactive Phylogenetics Module

Gene Id
Sspon.03G0008820-1A

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sspon.03G0008820-1A Saccharum spontaneum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 2136.3 1195 100.0
Sspon.03G0008830-1A Saccharum spontaneum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 2082.0 1195 98.2
Sspon.03G0008820-2B Saccharum spontaneum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 2056.6 1174 98.6
Sobic.003G171400 Sorghum bicolor HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1902.9 1196 90.5
Seita.5G180700 Setaria italica HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1868.6 1197 88.1
Sspon.03G0008820-1P Saccharum spontaneum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1840.1 1074 98.0
OsR498G0101112100.01 Oryza sativa ssp. indica HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1630.2 1202 78.6
Bradi2g13730 Brachypodium distachyon HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1627.8 1200 73.7
TRITD3Av1G117080 Triticum turgidum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1561.2 1198 71.6
TraesCS3B02G228000 Triticum aestivum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1560.0 1198 71.5
TraesCS3D02G196800 Triticum aestivum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1532.7 1198 70.5
Zm00008a030606 Zea mays PH207 HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1475.3 1075 82.4
TRITD3Bv1G108230 Triticum turgidum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1457.2 1198 68.0
LOC_Os01g33060 Oryza sativa ssp. japonica HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1407.9 1042 79.4
OB01G27190 Oryza brachyantha HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1395.6 1035 80.0
p5.00_sc00008_p0064 Elaeis guineensis HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1338.6 1203 63.6
CALSI_Maker00032109 Calamus simplicifolius HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1320.4 1201 62.7
Zm00001d009337 Zea mays B73 HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1295.8 729 92.7
Ma04_g06740 Musa acuminata HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1294.6 1204 62.9
TraesCS3A02G198700 Triticum aestivum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1281.9 892 76.8
Ma04_g13700 Musa acuminata HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1269.2 1200 60.2
Zm00007a00022699 Zea mays B104 HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1260.0 764 88.1
AT5G16210 Arabidopsis thaliana HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1143.3 1196 59.4
PEQU_18925 Phalaenopsis equestris HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1127.1 1186 58.7
Zosma10g01700 Zostera marina HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1117.8 1214 52.6
Oropetium_20150105_25415 Oropetium thomaeum HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1104.0 1205 63.2
Zosma112g00450 Zostera marina HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1096.6 1208 52.0
Aco018711 Ananas comosus HOM04x5M004235 ORTHO04x5M004910 0.0e+00 1082.4 978 63.6
Zjn_sc00156.1.g00280.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004235 ORTHO04x5M004910 7.9e-301 1036.2 1093 56.6
ATR0681G033 Amborella trichopoda HOM04x5M004235 ORTHO04x5M004910 1.8e-297 1025.0 1044 62.1
ASH_gene5899 Apostasia shenzhenica HOM04x5M004235 ORTHO04x5M004910 3.4e-296 1020.8 1280 53.6
GSVIVG01030979001 Vitis vinifera HOM04x5M004235 ORTHO04x5M004910 3.8e-295 1017.3 1037 61.9
Pgl_GLEAN_10003830 Cenchrus americanus HOM04x5M004235 ORTHO04x5M004910 9.3e-294 1012.7 1198 53.5
Potri.004G095900 Populus trichocarpa HOM04x5M004235 ORTHO04x5M004910 1.6e-293 1011.9 1019 57.7
Spipo18G0037100 Spirodela polyrhiza HOM04x5M004235 ORTHO04x5M004910 1.7e-287 991.9 1027 61.1
Mapoly0103s0005 Marchantia polymorpha HOM04x5M004235 ORTHO04x5M004910 7.0e-257 890.2 1187 47.8
Solyc02g086340.2 Solanum lycopersicum HOM04x5M004235 ORTHO04x5M004910 1.1e-241 839.7 954 58.9
Pp3c18_21770 Physcomitrium patens HOM04x5M004235 ORTHO04x5M004910 3.3e-238 828.2 1202 42.3
Misin06G150400 Miscanthus sinensis HOM04x5M004235 ORTHO04x5M004910 2.7e-232 808.5 435 95.6
Pp3c18_21850 Physcomitrium patens HOM04x5M004235 ORTHO04x5M004910 8.9e-220 766.9 1082 42.4
gene4661 Selaginella moellendorffii HOM04x5M004235 ORTHO04x5M004910 3.2e-217 758.4 1169 40.8
gene35017 Selaginella moellendorffii HOM04x5M004235 ORTHO04x5M004910 1.2e-216 756.5 1182 40.3
Pp3c3_38010 Physcomitrium patens HOM04x5M004235 ORTHO04x5M004910 6.0e-200 701.0 1141 44.0
Pgl_GLEAN_10000163 Cenchrus americanus HOM04x5M004235 ORTHO04x5M004910 6.0e-192 674.5 733 55.9
HORVU2Hr1G061110 Hordeum vulgare HOM04x5M004235 ORTHO04x5M004910 1.0e-186 657.1 445 76.6
PAB00016876 Picea abies HOM04x5M004235 ORTHO04x5M004910 6.8e-127 458.4 305 72.8
HORVU3Hr1G043640 Hordeum vulgare HOM04x5M004235 ORTHO04x5M004910 3.2e-124 449.5 489 68.9
Misin05G160200 Miscanthus sinensis HOM04x5M004235 ORTHO04x5M004910 1.2e-112 411.0 235 91.1
Zm00001d009336 Zea mays B73 HOM04x5M004235 ORTHO04x5M004910 8.6e-106 388.3 228 89.0
Misin06G150500 Miscanthus sinensis HOM04x5M004235 ORTHO04x5M004910 1.9e-89 334.0 271 95.9
TraesCS3A02G198800 Triticum aestivum HOM04x5M004235 ORTHO04x5M004910 1.3e-88 331.3 237 77.2
Zm00007a00022697 Zea mays B104 HOM04x5M004235 ORTHO04x5M004910 6.0e-75 285.8 175 86.9
PAB00016317 Picea abies HOM04x5M004235 ORTHO04x5M004910 3.1e-55 220.3 215 58.1
Zjn_sc00156.1.g00285.1.br Zoysia japonica ssp. nagirizaki HOM04x5M004235 ORTHO04x5M004910 1.2e-46 191.8 120 83.3
HORVU3Hr1G043690 Hordeum vulgare HOM04x5M004235 ORTHO04x5M004910 1.7e-45 188.0 114 84.2
GSVIVG01030980001 Vitis vinifera HOM04x5M004235 ORTHO04x5M004910 8.8e-42 175.6 143 67.1
PH01004645G0100 Phyllostachys edulis HOM04x5M004235 ORTHO04x5M004910 5.5e-36 156.4 159 58.5
ATR0681G242 Amborella trichopoda HOM04x5M004235 ORTHO04x5M004910 2.7e-35 154.1 160 55.0
Misin06G150600 Miscanthus sinensis HOM04x5M004235 ORTHO04x5M004910 2.7e-35 154.1 77 98.7
Spipo18G0037200 Spirodela polyrhiza HOM04x5M004235 ORTHO04x5M004910 2.7e-35 154.1 136 62.5
PH01000404G0290 Phyllostachys edulis HOM04x5M004235 ORTHO04x5M004910 4.7e-35 153.3 94 86.2
Cre03.g205137 Chlamydomonas reinhardtii HOM04x5M004235 ORTHO04x5M004910 3.6e-27 127.1 188 37.8
Solyc02g086320.1 Solanum lycopersicum HOM04x5M004235 ORTHO04x5M004910 2.3e-18 97.8 88 60.2
PEQU_38627 Phalaenopsis equestris HOM04x5M004235 ORTHO04x5M004910 5.6e-12 76.6 82 48.8
PH01000404G0310 Phyllostachys edulis HOM04x5M004235 ORTHO04x5M004910 8.0e-11 72.8 45 73.3
MCO16G648 Micromonas commoda HOM04x5M004235 ORTHO04x5M004910 2.6e-09 67.8 287 23.3

Amborella trichopoda (2 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (3 genes)
Lolium perenne (0 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (3 genes)
Picea abies (2 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (4 genes)
Triticum turgidum (2 genes)
Vitis vinifera (2 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings