Interactive Phylogenetics Module

Gene Id
Sobic.004G294700

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
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After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sobic.004G294700 Sorghum bicolor HOM04x5M003245 ORTHO04x5M005668 3.7e-231 803.1 394 100.0
Sspon.01G0000930-1P Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 1.2e-205 718.4 394 93.4
Zm00001d017492 Zea mays B73 HOM04x5M003245 ORTHO04x5M005668 2.8e-202 707.2 395 91.4
Zm00007a00015682 Zea mays B104 HOM04x5M003245 ORTHO04x5M005668 2.8e-202 707.2 395 91.4
Sspon.01G0000930-3D Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 6.4e-199 696.0 388 92.3
Seita.1G260300 Setaria italica HOM04x5M003245 ORTHO04x5M005668 2.4e-198 694.1 395 89.9
Sspon.01G0000930-1A Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 2.7e-197 690.6 388 91.5
Misin08G230600 Miscanthus sinensis HOM04x5M003245 ORTHO04x5M005668 1.4e-190 668.3 360 94.2
Oropetium_20150105_21240 Oropetium thomaeum HOM04x5M003245 ORTHO04x5M005668 3.1e-185 650.6 393 85.5
Misin07G434300 Miscanthus sinensis HOM04x5M003245 ORTHO04x5M005668 4.4e-184 646.7 353 93.5
TraesCS6B02G275600 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 2.1e-178 627.9 391 82.4
TRITD6Bv1G145190 Triticum turgidum HOM04x5M003245 ORTHO04x5M005668 2.1e-178 627.9 391 82.4
HORVU6Hr1G063100 Hordeum vulgare HOM04x5M003245 ORTHO04x5M005668 3.6e-178 627.1 391 81.8
TraesCS6A02G249800 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 4.0e-177 623.6 391 81.8
TRITD6Av1G159240 Triticum turgidum HOM04x5M003245 ORTHO04x5M005668 4.0e-177 623.6 391 81.8
TraesCS6D02G231500 Triticum aestivum HOM04x5M003245 ORTHO04x5M005668 3.5e-173 610.5 391 80.6
Bradi3g50726 Brachypodium distachyon HOM04x5M003245 ORTHO04x5M005668 2.1e-170 601.3 390 79.2
PH01003305G0030 Phyllostachys edulis HOM04x5M003245 ORTHO04x5M005668 5.8e-168 593.2 337 88.4
OsR498G0204455800.01 Oryza sativa ssp. indica HOM04x5M003245 ORTHO04x5M005668 1.3e-167 592.0 394 77.7
LP006587 Lolium perenne HOM04x5M003245 ORTHO04x5M005668 1.7e-167 591.7 394 77.4
OB02G33900 Oryza brachyantha HOM04x5M003245 ORTHO04x5M005668 4.9e-167 590.1 387 79.6
LOC_Os02g44104 Oryza sativa ssp. japonica HOM04x5M003245 ORTHO04x5M005668 1.9e-166 588.2 394 77.4
Zjn_sc00007.1.g10190.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M003245 ORTHO04x5M005668 4.8e-162 573.5 325 88.6
PH01000995G0530 Phyllostachys edulis HOM04x5M003245 ORTHO04x5M005668 1.1e-150 535.8 303 89.1
Aco012817 Ananas comosus HOM04x5M003245 ORTHO04x5M005668 6.1e-125 450.3 384 59.6
p5.00_sc00002_p0220 Elaeis guineensis HOM04x5M003245 ORTHO04x5M005668 1.8e-124 448.7 389 59.6
Ma04_g20220 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 5.0e-119 430.6 390 57.2
Ma05_g13320 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 1.8e-116 422.2 383 56.1
Ma04_g36850 Musa acuminata HOM04x5M003245 ORTHO04x5M005668 3.8e-111 404.4 388 55.7
Zm00008a022532 Zea mays PH207 HOM04x5M003245 ORTHO04x5M005668 4.0e-108 394.4 193 96.9
Spipo11G0034400 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 8.8e-108 393.3 395 52.9
Pgl_GLEAN_10009580 Cenchrus americanus HOM04x5M003245 ORTHO04x5M005668 3.5e-104 381.3 193 93.3
Spipo17G0022500 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 5.5e-102 374.0 386 52.1
ASH_gene6044 Apostasia shenzhenica HOM04x5M003245 ORTHO04x5M005668 2.7e-96 355.1 344 53.8
CALSI_Maker00016894 Calamus simplicifolius HOM04x5M003245 ORTHO04x5M005668 8.9e-92 340.1 245 64.1
PEQU_14480 Phalaenopsis equestris HOM04x5M003245 ORTHO04x5M005668 8.9e-92 340.1 358 52.8
Zosma85g00440 Zostera marina HOM04x5M003245 ORTHO04x5M005668 4.6e-88 327.8 349 49.3
Spipo1G0082300 Spirodela polyrhiza HOM04x5M003245 ORTHO04x5M005668 5.6e-86 320.9 349 49.6
GSVIVG01014046001 Vitis vinifera HOM04x5M003245 ORTHO04x5M005668 1.6e-85 319.3 379 47.0
Potri.001G125800 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 5.2e-84 314.3 344 50.6
Potri.002G143200 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 8.9e-84 313.5 356 48.0
Sobic.001G303825 Sorghum bicolor HOM04x5M003245 ORTHO04x5M005668 3.4e-83 311.6 174 93.1
Potri.003G107900 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 4.4e-83 311.2 344 49.4
Zosma85g00410 Zostera marina HOM04x5M003245 ORTHO04x5M005668 4.9e-82 307.8 380 43.2
Solyc01g095800.2 Solanum lycopersicum HOM04x5M003245 ORTHO04x5M005668 9.2e-81 303.5 345 48.4
PAB00017842 Picea abies HOM04x5M003245 ORTHO04x5M005668 2.1e-80 302.4 358 46.6
Solyc03g093310.2 Solanum lycopersicum HOM04x5M003245 ORTHO04x5M005668 2.0e-75 285.8 340 47.4
AT5G51380 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 3.4e-75 285.0 346 46.0
ATR0317G122 Amborella trichopoda HOM04x5M003245 ORTHO04x5M005668 3.7e-74 281.6 397 41.3
p5.00_sc00023_p0055 Elaeis guineensis HOM04x5M003245 ORTHO04x5M005668 1.1e-73 280.0 290 54.8
Sspon.01G0000930-2C Saccharum spontaneum HOM04x5M003245 ORTHO04x5M005668 9.2e-73 276.9 153 96.1
AT5G51370 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 2.1e-72 275.8 351 45.0
gene2101 Selaginella moellendorffii HOM04x5M003245 ORTHO04x5M005668 5.8e-67 257.7 403 41.4
gene5137 Selaginella moellendorffii HOM04x5M003245 ORTHO04x5M005668 5.8e-67 257.7 403 41.4
Potri.014G059100 Populus trichocarpa HOM04x5M003245 ORTHO04x5M005668 2.9e-66 255.4 187 62.6
GSVIVG01018169001 Vitis vinifera HOM04x5M003245 ORTHO04x5M005668 2.1e-64 249.2 198 58.1
Pp3c14_8820 Physcomitrium patens HOM04x5M003245 ORTHO04x5M005668 3.6e-61 238.4 436 35.1
PAB00008675 Picea abies HOM04x5M003245 ORTHO04x5M005668 2.4e-60 235.7 408 36.3
Pp3c10_7500 Physcomitrium patens HOM04x5M003245 ORTHO04x5M005668 1.2e-59 233.4 440 35.0
AT5G07670 Arabidopsis thaliana HOM04x5M003245 ORTHO04x5M005668 2.3e-55 219.2 379 38.3
Mapoly0089s0010 Marchantia polymorpha HOM04x5M003245 ORTHO04x5M005668 1.9e-54 216.1 521 32.2
gene29505 Selaginella moellendorffii HOM04x5M007241 ORTHO04x5M009064 1.3e-10 70.5 348 27.3
gene31603 Selaginella moellendorffii HOM04x5M007241 ORTHO04x5M009064 2.9e-10 69.3 348 27.0
Sspon.07G0012970-3C Saccharum spontaneum HOM04x5M000398 ORTHO04x5M000623 6.5e-10 68.2 355 27.9
TraesCS2A02G359900 Triticum aestivum HOM04x5M001710 ORTHO04x5M001818 1.9e-09 66.6 327 26.3
PH01000467G0180 Phyllostachys edulis HOM04x5M001710 ORTHO04x5M001818 3.2e-09 65.9 310 26.8
Misin11G135000 Miscanthus sinensis HOM04x5M001710 ORTHO04x5M001818 4.2e-09 65.5 380 26.1
Sspon.07G0012970-1A Saccharum spontaneum HOM04x5M000398 ORTHO04x5M000623 5.5e-09 65.1 348 27.0
p5.00_sc00004_p0111 Elaeis guineensis HOM04x5M001710 ORTHO04x5M001818 9.4e-09 64.3 214 27.6
Zm00001d019677 Zea mays B73 HOM04x5M001710 ORTHO04x5M001818 9.4e-09 64.3 401 27.4
Zm00007a00007249 Zea mays B104 HOM04x5M001710 ORTHO04x5M001818 9.4e-09 64.3 401 27.4
CALSI_Maker00037456 Calamus simplicifolius HOM04x5M001710 ORTHO04x5M001818 1.6e-08 63.5 430 25.3
Aco024398 Ananas comosus HOM04x5M001710 ORTHO04x5M001818 2.1e-08 63.2 311 27.0
Seita.3G037200 Setaria italica HOM04x5M000398 ORTHO04x5M000623 2.7e-08 62.8 310 29.7
Spipo23G0043100 Spirodela polyrhiza HOM04x5M002561 ORTHO04x5M002801 2.7e-08 62.8 167 24.6
GSVIVG01024623001 Vitis vinifera HOM04x5M002561 ORTHO04x5M002801 3.6e-08 62.4 160 25.0
ASH_gene3870 Apostasia shenzhenica HOM04x5M001710 ORTHO04x5M001818 8.0e-08 61.2 299 27.4
Ma09_g23070 Musa acuminata HOM04x5M001710 ORTHO04x5M001818 8.0e-08 61.2 217 27.2
Solyc06g054440.2 Solanum lycopersicum HOM04x5M005490 ORTHO04x5M004478 8.0e-08 61.2 169 29.6
CALSI_Maker00010146 Calamus simplicifolius HOM04x5M001710 ORTHO04x5M001818 1.4e-07 60.5 415 25.3
CALSI_Maker00015473 Calamus simplicifolius HOM04x5M001710 ORTHO04x5M001818 1.4e-07 60.5 320 26.2
Ma09_g11000 Musa acuminata HOM04x5M001710 ORTHO04x5M001818 1.8e-07 60.1 335 26.9
Potri.014G023500 Populus trichocarpa HOM04x5M001710 ORTHO04x5M001818 4.0e-07 58.9 280 27.5
TraesCS5B02G097800 Triticum aestivum HOM04x5M003741 ORTHO04x5M004639 4.0e-07 58.9 195 27.2
TRITD5Bv1G046450 Triticum turgidum HOM04x5M003741 ORTHO04x5M004639 4.0e-07 58.9 195 27.2
ATR0490G002 Amborella trichopoda HOM04x5M001710 ORTHO04x5M001818 8.8e-07 57.8 212 26.9
CALSI_Maker00027207 Calamus simplicifolius HOM04x5M001710 ORTHO04x5M001818 8.8e-07 57.8 398 24.4
CALSI_Maker00027201 Calamus simplicifolius HOM04x5M001710 ORTHO04x5M001818 8.8e-07 57.8 398 24.4
gene9569 Selaginella moellendorffii HOM04x5M005129 ORTHO04x5M007169 1.1e-06 57.4 245 26.9
Sspon.07G0012970-4D Saccharum spontaneum HOM04x5M000398 ORTHO04x5M000623 1.1e-06 57.4 371 26.7
AT1G47056 Arabidopsis thaliana HOM04x5M001710 ORTHO04x5M001818 1.5e-06 57.0 150 29.3
HORVU5Hr1G024060 Hordeum vulgare HOM04x5M003741 ORTHO04x5M004639 1.5e-06 57.0 174 28.7
Potri.017G053400 Populus trichocarpa HOM04x5M001010 ORTHO04x5M000824 1.5e-06 57.0 246 24.4
gene429 Selaginella moellendorffii HOM04x5M002561 ORTHO04x5M002801 1.5e-06 57.0 216 25.5
Spipo27G0021100 Spirodela polyrhiza HOM04x5M001828 ORTHO04x5M001806 2.0e-06 56.6 136 29.4
Sspon.07G0012970-2B Saccharum spontaneum HOM04x5M000398 ORTHO04x5M000623 2.0e-06 56.6 187 33.7
Zosma41g00420 Zostera marina HOM04x5M005490 ORTHO04x5M004478 2.6e-06 56.2 319 27.9
Ma04_g12920 Musa acuminata HOM04x5M001710 ORTHO04x5M001818 3.3e-06 55.8 275 28.0
Aco010022 Ananas comosus HOM04x5M005129 ORTHO04x5M007169 4.4e-06 55.5 363 25.9
Spipo6G0036000 Spirodela polyrhiza HOM04x5M005490 ORTHO04x5M004478 4.4e-06 55.5 162 27.2
GSVIVG01030257001 Vitis vinifera HOM04x5M002561 ORTHO04x5M002801 4.4e-06 55.5 199 22.1
Zjn_sc00084.1.g01040.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M001710 ORTHO04x5M001818 4.4e-06 55.5 199 33.2
Sobic.009G045300 Sorghum bicolor HOM04x5M000398 ORTHO04x5M000623 5.7e-06 55.1 187 33.2
PAB00028759 Picea abies HOM04x5M001710 ORTHO04x5M001818 7.5e-06 54.7 177 26.0
gene26044 Selaginella moellendorffii HOM04x5M005490 ORTHO04x5M004478 7.5e-06 54.7 288 27.1
TRITD4Av1G080410 Triticum turgidum HOM04x5M005490 ORTHO04x5M004478 7.5e-06 54.7 306 24.8

Amborella trichopoda (2 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (2 genes)
Arabidopsis thaliana (4 genes)
Asparagus officinalis (0 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (6 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (3 genes)
Musa acuminata (6 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (2 genes)
Picea abies (3 genes)
Populus trichocarpa (6 genes)
Saccharum spontaneum (8 genes)
Selaginella moellendorffii (7 genes)
Setaria italica (2 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (6 genes)
Triticum aestivum (5 genes)
Triticum turgidum (4 genes)
Vitis vinifera (4 genes)
Zea mays B73 (2 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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