Interactive Phylogenetics Module

Gene Id
Sobic.001G241000

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sobic.001G241000 Sorghum bicolor HOM04x5M001091 ORTHO04x5M001199 4.7e-60 233.4 159 100.0
Misin02G212100 Miscanthus sinensis HOM04x5M001091 ORTHO04x5M001199 1.3e-41 172.2 150 84.0
Sspon.01G0043350-2P Saccharum spontaneum HOM04x5M001091 ORTHO04x5M001199 1.7e-41 171.8 152 80.9
Sspon.01G0043350-2C Saccharum spontaneum HOM04x5M001091 ORTHO04x5M022309 1.8e-35 151.8 126 77.8
LP018776 Lolium perenne HOM04x5M001091 ORTHO04x5M001199 8.1e-28 126.3 144 56.9
Bradi3g27150 Brachypodium distachyon HOM04x5M001091 ORTHO04x5M001199 5.3e-27 123.6 144 56.2
LP017820 Lolium perenne HOM04x5M001091 ORTHO04x5M001199 6.9e-27 123.2 144 55.6
TraesCS4B02G275300 Triticum aestivum HOM04x5M001091 ORTHO04x5M001199 2.0e-26 121.7 144 54.9
TRITD4Bv1G163580 Triticum turgidum HOM04x5M001091 ORTHO04x5M001199 2.0e-26 121.7 144 54.9
HORVU4Hr1G073120 Hordeum vulgare HOM04x5M001091 ORTHO04x5M001199 2.6e-26 121.3 144 54.9
TraesCS4A02G030600 Triticum aestivum HOM04x5M001091 ORTHO04x5M001199 5.8e-26 120.2 144 54.2
TraesCS4D02G273900 Triticum aestivum HOM04x5M001091 ORTHO04x5M001199 7.6e-26 119.8 144 53.5
Sobic.001G497700 Sorghum bicolor HOM04x5M001091 ORTHO04x5M001199 2.2e-25 118.2 144 68.1
Oropetium_20150105_00139 Oropetium thomaeum HOM04x5M001091 ORTHO04x5M001199 2.9e-25 117.9 144 54.2
TRITD4Av1G010230 Triticum turgidum HOM04x5M001091 ORTHO04x5M001199 2.9e-25 117.9 144 53.5
Sspon.01G0003390-3C Saccharum spontaneum HOM04x5M001091 ORTHO04x5M001199 6.4e-25 116.7 146 53.4
Seita.9G533500 Setaria italica HOM04x5M001091 ORTHO04x5M001199 1.1e-24 115.9 146 59.6
Sspon.01G0003390-1A Saccharum spontaneum HOM04x5M001091 ORTHO04x5M001199 1.9e-24 115.2 142 64.8
TraesCS4A02G030700 Triticum aestivum HOM04x5M001091 ORTHO04x5M001199 2.4e-24 114.8 144 52.8
Zjn_sc00003.1.g11730.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M001091 ORTHO04x5M001199 5.5e-24 113.6 144 60.4
Zm00001d027740 Zea mays B73 HOM04x5M001091 ORTHO04x5M001199 1.2e-23 112.5 149 68.5
Zm00007a00027152 Zea mays B104 HOM04x5M001091 ORTHO04x5M001199 1.2e-23 112.5 149 68.5
Misin02G468800 Miscanthus sinensis HOM04x5M001091 ORTHO04x5M001199 7.9e-23 109.8 146 51.4
Aco009705 Ananas comosus HOM04x5M001091 ORTHO04x5M001199 1.8e-22 108.6 143 51.7
GSVIVG01017985001 Vitis vinifera HOM04x5M001091 ORTHO04x5M001199 3.0e-22 107.8 144 50.0
LOC_Os03g06360 Oryza sativa ssp. japonica HOM04x5M001091 ORTHO04x5M001199 1.1e-21 105.9 145 51.0
OsR498G0305259200.01 Oryza sativa ssp. indica HOM04x5M001091 ORTHO04x5M001199 1.1e-21 105.9 145 51.0
p5.00_sc00041_p0029 Elaeis guineensis HOM04x5M001091 ORTHO04x5M001199 1.5e-21 105.5 144 49.3
p5.00_sc00217_p0012 Elaeis guineensis HOM04x5M001091 ORTHO04x5M001199 4.3e-21 104.0 144 49.3
Solyc09g082110.2 Solanum lycopersicum HOM04x5M001091 ORTHO04x5M001199 5.6e-21 103.6 144 46.5
Sspon.01G0003390-2B Saccharum spontaneum HOM04x5M001091 ORTHO04x5M001199 1.6e-20 102.1 146 50.0
Bradi1g74510 Brachypodium distachyon HOM04x5M001091 ORTHO04x5M001199 4.8e-20 100.5 140 50.7
GSVIVG01001170001 Vitis vinifera HOM04x5M001091 ORTHO04x5M001199 6.2e-20 100.1 144 45.1
AT3G22490 Arabidopsis thaliana HOM04x5M001091 ORTHO04x5M001199 1.1e-19 99.4 144 47.9
p5.00_sc00041_p0030 Elaeis guineensis HOM04x5M001091 ORTHO04x5M001199 1.4e-19 99.0 144 47.2
Ma04_g14790 Musa acuminata HOM04x5M001091 ORTHO04x5M001199 5.3e-19 97.1 146 44.5
GSVIVG01021881001 Vitis vinifera HOM04x5M001091 ORTHO04x5M001199 2.6e-18 94.7 146 45.9
Bradi1g08750 Brachypodium distachyon HOM04x5M001091 ORTHO04x5M001199 4.5e-18 94.0 148 48.6
Ma07_g28870 Musa acuminata HOM04x5M001091 ORTHO04x5M001199 1.3e-17 92.4 144 43.1
Ma03_g26720 Musa acuminata HOM04x5M001091 ORTHO04x5M001199 2.2e-17 91.7 147 45.6
Sspon.05G0028860-2C Saccharum spontaneum HOM04x5M001091 ORTHO04x5M001199 2.2e-17 91.7 144 45.8
Potri.005G048000 Populus trichocarpa HOM04x5M001091 ORTHO04x5M001199 6.5e-17 90.1 144 45.8
Zosma296g00020 Zostera marina HOM04x5M001091 ORTHO04x5M001199 1.4e-16 89.0 143 44.1
Zm00008a000406 Zea mays PH207 HOM04x5M001091 ORTHO04x5M001199 5.5e-16 87.0 84 63.1
CALSI_Maker00033463 Calamus simplicifolius HOM04x5M001091 ORTHO04x5M001199 1.2e-15 85.9 145 42.1
Seita.4G159500 Setaria italica HOM04x5M001091 ORTHO04x5M001199 1.2e-15 85.9 150 43.3
TraesCS5A02G385600 Triticum aestivum HOM04x5M001091 ORTHO04x5M001199 1.2e-15 85.9 147 44.9
TRITD5Av1G203100 Triticum turgidum HOM04x5M001091 ORTHO04x5M001199 1.2e-15 85.9 147 44.9
TraesCS5D02G395600 Triticum aestivum HOM04x5M001091 ORTHO04x5M001199 1.6e-15 85.5 147 44.2
HORVU7Hr1G082040 Hordeum vulgare HOM04x5M001091 ORTHO04x5M001199 2.7e-15 84.7 149 42.3
OsR498G0612530800.01 Oryza sativa ssp. indica HOM04x5M001091 ORTHO04x5M001199 2.7e-15 84.7 150 42.0
Sobic.004G142500 Sorghum bicolor HOM04x5M001091 ORTHO04x5M001199 2.7e-15 84.7 150 42.0
Seita.9G093900 Setaria italica HOM04x5M001091 ORTHO04x5M001199 4.6e-15 84.0 145 42.1
TraesCS5B02G390600 Triticum aestivum HOM04x5M001091 ORTHO04x5M001199 4.6e-15 84.0 147 43.5
TraesCS7D02G340400 Triticum aestivum HOM04x5M001091 ORTHO04x5M001199 4.6e-15 84.0 149 42.3
Sspon.04G0026090-1B Saccharum spontaneum HOM04x5M001091 ORTHO04x5M001199 6.0e-15 83.6 150 41.3
Sspon.04G0026090-2D Saccharum spontaneum HOM04x5M001091 ORTHO04x5M001199 6.0e-15 83.6 150 41.3
Zm00007a00037809 Zea mays B104 HOM04x5M026640 ORTHO04x5M022309 6.0e-15 83.6 70 71.4
LP023620 Lolium perenne HOM04x5M001091 ORTHO04x5M001199 7.9e-15 83.2 150 43.3
Zm00001d034002 Zea mays B73 HOM04x5M001091 ORTHO04x5M001199 7.9e-15 83.2 144 42.4
Zm00007a00005386 Zea mays B104 HOM04x5M001091 ORTHO04x5M001199 7.9e-15 83.2 144 42.4
Zm00008a005172 Zea mays PH207 HOM04x5M001091 ORTHO04x5M001199 7.9e-15 83.2 144 42.4
Oropetium_20150105_06777 Oropetium thomaeum HOM04x5M001091 ORTHO04x5M001199 1.0e-14 82.8 150 42.7
LOC_Os06g23350 Oryza sativa ssp. japonica HOM04x5M001091 ORTHO04x5M001199 1.3e-14 82.4 150 41.3
Spipo24G0026300 Spirodela polyrhiza HOM04x5M001091 ORTHO04x5M001199 1.8e-14 82.0 143 43.4
Sspon.05G0028860-1B Saccharum spontaneum HOM04x5M000121 ORTHO04x5M000054 1.8e-14 82.0 83 57.8
TraesCS7A02G333100 Triticum aestivum HOM04x5M001091 ORTHO04x5M001199 1.8e-14 82.0 149 47.7
TRITD7Av1G177100 Triticum turgidum HOM04x5M001091 ORTHO04x5M001199 1.8e-14 82.0 149 47.7
AT3G22500 Arabidopsis thaliana HOM04x5M001091 ORTHO04x5M001199 3.0e-14 81.3 144 43.8
Bradi4g07340 Brachypodium distachyon HOM04x5M001091 ORTHO04x5M001199 3.0e-14 81.3 148 41.9
Ma03_g32160 Musa acuminata HOM04x5M001091 ORTHO04x5M001199 3.0e-14 81.3 142 42.3
OsR498G0307043600.01 Oryza sativa ssp. indica HOM04x5M001091 ORTHO04x5M001199 3.0e-14 81.3 150 46.7
Zm00008a001074 Zea mays PH207 HOM04x5M001091 ORTHO04x5M001199 3.0e-14 81.3 144 41.0
Solyc09g082100.2 Solanum lycopersicum HOM04x5M001091 ORTHO04x5M001199 3.9e-14 80.9 143 43.4
TraesCS7B02G244300 Triticum aestivum HOM04x5M001091 ORTHO04x5M001199 3.9e-14 80.9 149 45.6
OB06G21910 Oryza brachyantha HOM04x5M001091 ORTHO04x5M001199 5.1e-14 80.5 150 40.7
PAB00023301 Picea abies HOM04x5M001091 ORTHO04x5M001199 5.1e-14 80.5 143 40.6
TRITD7Bv1G138870 Triticum turgidum HOM04x5M001091 ORTHO04x5M001199 1.1e-13 79.3 149 45.0
Sobic.001G091000 Sorghum bicolor HOM04x5M001091 ORTHO04x5M001199 1.5e-13 79.0 143 41.3
Zm00001d013169 Zea mays B73 HOM04x5M001091 ORTHO04x5M001199 1.9e-13 78.6 144 40.3
Zm00007a00034612 Zea mays B104 HOM04x5M001091 ORTHO04x5M001199 1.9e-13 78.6 159 38.4
ATR0697G206 Amborella trichopoda HOM04x5M001091 ORTHO04x5M001199 9.7e-13 76.3 144 47.9
Mapoly0057s0004 Marchantia polymorpha HOM04x5M001091 ORTHO04x5M001199 1.6e-12 75.5 145 37.2
Zm00001d032904 Zea mays B73 HOM04x5M026640 ORTHO04x5M022309 1.6e-12 75.5 61 73.8
gene12515 Selaginella moellendorffii HOM04x5M001091 ORTHO04x5M001199 2.8e-12 74.7 142 39.4
Potri.T122000 Populus trichocarpa HOM04x5M001091 ORTHO04x5M001199 4.8e-12 73.9 78 53.8
evm.TU.AsparagusV1_08.1905.V1.1 Asparagus officinalis HOM04x5M001091 ORTHO04x5M001199 6.3e-12 73.6 74 59.5
Pp3c6_200 Physcomitrium patens HOM04x5M001091 ORTHO04x5M001199 8.2e-12 73.2 142 38.0
HORVU5Hr1G094680 Hordeum vulgare HOM04x5M001091 ORTHO04x5M001199 1.1e-11 72.8 130 43.8
gene6589 Selaginella moellendorffii HOM04x5M001091 ORTHO04x5M001199 1.1e-11 72.8 142 38.0
PEQU_04959 Phalaenopsis equestris HOM04x5M001091 ORTHO04x5M001199 4.1e-11 70.9 149 40.9
LOC_Os03g53610 Oryza sativa ssp. japonica HOM04x5M001091 ORTHO04x5M001199 5.3e-11 70.5 83 59.0
Misin08G126300 Miscanthus sinensis HOM04x5M001091 ORTHO04x5M001199 2.0e-10 68.6 140 37.9
Pgl_GLEAN_10013782 Cenchrus americanus HOM04x5M001091 ORTHO04x5M001199 5.9e-10 67.0 85 63.5
Pp3c25_10310 Physcomitrium patens HOM04x5M001091 ORTHO04x5M001199 1.0e-09 66.2 143 35.0
Misin07G344400 Miscanthus sinensis HOM04x5M001091 ORTHO04x5M001199 1.3e-09 65.9 141 38.3
Oropetium_20150105_25826 Oropetium thomaeum HOM04x5M001091 ORTHO04x5M001199 1.3e-09 65.9 147 51.0
Oropetium_20150105_02465 Oropetium thomaeum HOM04x5M001091 ORTHO04x5M001199 1.3e-09 65.9 88 52.3
Seita.6G123500 Setaria italica HOM04x5M001091 ORTHO04x5M001199 1.3e-09 65.9 88 52.3
Zjn_sc00081.1.g00290.1.sm.mk Zoysia japonica ssp. nagirizaki HOM04x5M001091 ORTHO04x5M001199 2.9e-09 64.7 88 51.1
Sspon.06G0022230-1B Saccharum spontaneum HOM04x5M001091 ORTHO04x5M001199 8.5e-09 63.2 88 51.1
Sspon.06G0022230-3D Saccharum spontaneum HOM04x5M001091 ORTHO04x5M001199 1.1e-08 62.8 88 51.1
OB02G41490 Oryza brachyantha HOM04x5M001091 ORTHO04x5M001199 1.4e-08 62.4 69 50.7
Sspon.06G0022230-2C Saccharum spontaneum HOM04x5M001091 ORTHO04x5M001199 1.4e-08 62.4 88 51.1
Misin13G081800 Miscanthus sinensis HOM04x5M001091 ORTHO04x5M001199 2.5e-08 61.6 88 50.0
Misin13G081600 Miscanthus sinensis HOM04x5M001091 ORTHO04x5M001199 2.5e-08 61.6 88 50.0
Spipo24G0026400 Spirodela polyrhiza HOM04x5M001091 ORTHO04x5M001199 3.2e-08 61.2 79 53.2
Sobic.007G109800 Sorghum bicolor HOM04x5M001091 ORTHO04x5M001199 9.3e-08 59.7 88 50.0
LOC_Os09g28860 Oryza sativa ssp. japonica HOM04x5M001091 ORTHO04x5M001199 4.6e-07 57.4 66 54.5
Misin16G102200 Miscanthus sinensis HOM04x5M001091 ORTHO04x5M001199 1.0e-06 56.2 143 32.9
LOC_Os10g29570 Oryza sativa ssp. japonica HOM04x5M001091 ORTHO04x5M001199 2.3e-06 55.1 33 87.9
OsR498G1018765500.01 Oryza sativa ssp. indica HOM04x5M001091 ORTHO04x5M001199 2.3e-06 55.1 33 87.9

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (0 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (4 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (3 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (7 genes)
Musa acuminata (4 genes)
Oropetium thomaeum (4 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (4 genes)
Oryza sativa ssp. japonica (5 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (2 genes)
Picea abies (1 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (12 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (4 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (5 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (10 genes)
Triticum turgidum (5 genes)
Vitis vinifera (3 genes)
Zea mays B73 (4 genes)
Zea mays B104 (4 genes)
Zea mays PH207 (3 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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