Interactive Phylogenetics Module

Gene Id
Seita.3G040100

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Seita.3G040100 Setaria italica HOM04x5M002879 ORTHO04x5M003393 0.0e+00 2025.8 1215 100.0
Pgl_GLEAN_10005750 Cenchrus americanus HOM04x5M002879 ORTHO04x5M003393 0.0e+00 1617.4 1199 85.4
Sspon.07G0013290-2B Saccharum spontaneum HOM04x5M002879 ORTHO04x5M003393 0.0e+00 1529.6 1206 74.4
MisinT533100 Miscanthus sinensis HOM04x5M002879 ORTHO04x5M003393 0.0e+00 1494.6 1211 72.9
Zm00008a031735 Zea mays PH207 HOM04x5M002879 ORTHO04x5M003393 0.0e+00 1427.5 1217 70.1
Sobic.009G042000 Sorghum bicolor HOM04x5M002879 ORTHO04x5M003393 0.0e+00 1400.6 962 79.7
Zm00001d010877 Zea mays B73 HOM04x5M002879 ORTHO04x5M003393 0.0e+00 1395.6 1216 70.1
Zm00007a00003496 Zea mays B104 HOM04x5M002879 ORTHO04x5M003393 0.0e+00 1395.6 1216 70.1
Zm00001d024825 Zea mays B73 HOM04x5M002879 ORTHO04x5M003393 0.0e+00 1386.7 1215 67.7
Zm00008a037487 Zea mays PH207 HOM04x5M002879 ORTHO04x5M003393 0.0e+00 1385.9 1215 67.8
Zm00007a00014243 Zea mays B104 HOM04x5M002879 ORTHO04x5M003393 0.0e+00 1367.8 1214 67.0
Sspon.07G0013290-1A Saccharum spontaneum HOM04x5M002879 ORTHO04x5M003393 0.0e+00 1361.7 930 80.4
Sspon.07G0013290-3D Saccharum spontaneum HOM04x5M002879 ORTHO04x5M003393 0.0e+00 1361.7 930 80.4
PH01001556G0320 Phyllostachys edulis HOM04x5M002879 ORTHO04x5M003393 0.0e+00 1191.0 1014 67.3
PH01000258G0510 Phyllostachys edulis HOM04x5M002879 ORTHO04x5M003393 0.0e+00 1149.8 1213 66.4
Zjn_sc00016.1.g04400.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002879 ORTHO04x5M003393 0.0e+00 1109.7 973 64.3
OsR498G0509732600.01 Oryza sativa ssp. indica HOM04x5M002879 ORTHO04x5M003393 6.6e-311 1069.7 1230 62.8
Misin16G053200 Miscanthus sinensis HOM04x5M002879 ORTHO04x5M003393 1.1e-305 1052.4 752 78.1
OB05G13070 Oryza brachyantha HOM04x5M002879 ORTHO04x5M003393 8.6e-303 1042.7 1033 60.7
LOC_Os05g05440 Oryza sativa ssp. japonica HOM04x5M002879 ORTHO04x5M003393 1.2e-299 1032.3 1234 61.4
TRITD1Bv1G043440 Triticum turgidum HOM04x5M002879 ORTHO04x5M003393 4.9e-290 1000.3 1018 58.7
TraesCS1B02G108900 Triticum aestivum HOM04x5M002879 ORTHO04x5M003393 8.3e-290 999.6 1018 58.6
TRITD1Av1G046470 Triticum turgidum HOM04x5M002879 ORTHO04x5M003393 2.2e-282 974.9 1014 57.9
Bradi2g36210 Brachypodium distachyon HOM04x5M002879 ORTHO04x5M003393 3.7e-282 974.2 986 60.3
TraesCS1D02G091100 Triticum aestivum HOM04x5M002879 ORTHO04x5M003393 7.1e-281 969.9 981 58.6
TraesCS1A02G109400 Triticum aestivum HOM04x5M002879 ORTHO04x5M003393 2.2e-274 948.3 889 62.1
LP011595 Lolium perenne HOM04x5M002879 ORTHO04x5M003393 1.1e-270 936.0 1031 55.1
HORVU1Hr1G019640 Hordeum vulgare HOM04x5M002879 ORTHO04x5M003393 5.4e-265 917.1 990 56.6
p5.00_sc00173_p0044 Elaeis guineensis HOM04x5M002879 ORTHO04x5M003393 1.2e-147 527.3 1190 37.1
Aco018816 Ananas comosus HOM04x5M002879 ORTHO04x5M003393 2.1e-139 500.0 1053 38.4
evm.TU.AsparagusV1_08.3111.V1.1 Asparagus officinalis HOM04x5M002879 ORTHO04x5M003393 9.6e-137 491.1 963 38.1
CALSI_Maker00003059 Calamus simplicifolius HOM04x5M002879 ORTHO04x5M003393 3.7e-128 462.6 1143 35.3
Ma01_g19350 Musa acuminata HOM04x5M002879 ORTHO04x5M003393 4.8e-120 435.6 989 37.3
Oropetium_20150105_15521 Oropetium thomaeum HOM04x5M002879 ORTHO04x5M003393 6.7e-114 415.2 395 59.2
evm.TU.AsparagusV1_02.2045.V1.1 Asparagus officinalis HOM04x5M002879 ORTHO04x5M003393 1.3e-109 401.0 885 35.9
Potri.010G014700 Populus trichocarpa HOM04x5M002879 ORTHO04x5M003393 2.8e-96 356.7 1069 32.9
ATR0706G247 Amborella trichopoda HOM04x5M002879 ORTHO04x5M003393 4.8e-96 355.9 1076 32.5
Solyc01g067790.2 Solanum lycopersicum HOM04x5M002879 ORTHO04x5M003393 1.2e-94 351.3 1021 32.3
Spipo0G0092600 Spirodela polyrhiza HOM04x5M002879 ORTHO04x5M003393 1.2e-94 351.3 1008 32.5
GSVIVG01017825001 Vitis vinifera HOM04x5M002879 ORTHO04x5M003393 2.0e-94 350.5 994 32.9
PEQU_04238 Phalaenopsis equestris HOM04x5M002879 ORTHO04x5M003393 3.5e-94 349.7 926 33.9
Zosma8g00280 Zostera marina HOM04x5M002879 ORTHO04x5M003393 2.1e-83 313.9 1017 31.1
AT3G21480 Arabidopsis thaliana HOM04x5M002879 ORTHO04x5M003393 1.2e-81 308.1 1013 31.1
Aco002396 Ananas comosus HOM04x5M002879 ORTHO04x5M003393 1.3e-80 304.7 816 34.4
evm.TU.AsparagusV1_05.115.V1.1 Asparagus officinalis HOM04x5M002879 ORTHO04x5M003393 1.3e-77 294.7 867 32.9
Potri.T106800 Populus trichocarpa HOM04x5M002879 ORTHO04x5M003393 4.0e-74 283.1 905 31.8
Solyc06g008840.2 Solanum lycopersicum HOM04x5M002879 ORTHO04x5M003393 2.0e-70 270.8 238 57.1
p5.00_sc00172_p0005 Elaeis guineensis HOM04x5M002879 ORTHO04x5M003393 4.5e-70 269.6 204 63.7
PAB00006840 Picea abies HOM04x5M002879 ORTHO04x5M003393 1.7e-69 267.7 1099 27.9
Ma08_g33980 Musa acuminata HOM04x5M002879 ORTHO04x5M003393 8.6e-69 265.4 1038 30.5
Misin16G053300 Miscanthus sinensis HOM04x5M002879 ORTHO04x5M021304 4.0e-66 256.5 169 78.7
Oropetium_20150105_15520 Oropetium thomaeum HOM04x5M002879 ORTHO04x5M003393 4.9e-64 249.6 576 43.4
Zosma164g00110 Zostera marina HOM04x5M002879 ORTHO04x5M003393 7.8e-62 242.3 873 29.6
Sobic.003G420600 Sorghum bicolor HOM04x5M002879 ORTHO04x5M003393 1.0e-61 241.9 352 43.8
Oropetium_20150105_09915 Oropetium thomaeum HOM04x5M002879 ORTHO04x5M003393 1.9e-60 237.7 249 50.6
TraesCS3A02G476900 Triticum aestivum HOM04x5M002879 ORTHO04x5M003393 5.6e-60 236.1 839 29.4
TraesCS3B02G520300 Triticum aestivum HOM04x5M002879 ORTHO04x5M003393 9.5e-60 235.3 834 31.2
TRITD3Bv1G257350 Triticum turgidum HOM04x5M002879 ORTHO04x5M003393 9.5e-60 235.3 834 31.2
Zm00001d011895 Zea mays B73 HOM04x5M002879 ORTHO04x5M003393 2.8e-59 233.8 825 29.9
Zm00007a00009521 Zea mays B104 HOM04x5M002879 ORTHO04x5M003393 2.8e-59 233.8 825 29.9
Zm00008a032537 Zea mays PH207 HOM04x5M002879 ORTHO04x5M003393 4.7e-59 233.0 825 29.9
Pgl_GLEAN_10003762 Cenchrus americanus HOM04x5M002879 ORTHO04x5M003393 4.0e-58 229.9 314 45.5
TraesCS3D02G471400 Triticum aestivum HOM04x5M002879 ORTHO04x5M003393 6.8e-58 229.2 429 38.0
Bradi2g60357 Brachypodium distachyon HOM04x5M002879 ORTHO04x5M003393 4.9e-56 223.0 827 30.4
Seita.5G447200 Setaria italica HOM04x5M002879 ORTHO04x5M003393 8.3e-56 222.2 819 28.8
AT4G03130 Arabidopsis thaliana HOM04x5M002879 ORTHO04x5M003393 1.1e-55 221.9 296 43.9
Misin06G408300 Miscanthus sinensis HOM04x5M002879 ORTHO04x5M003393 5.4e-55 219.5 825 28.8
TRITD3Av1G262990 Triticum turgidum HOM04x5M002879 ORTHO04x5M003393 9.2e-55 218.8 430 37.4
LP013848 Lolium perenne HOM04x5M002879 ORTHO04x5M003393 6.0e-54 216.1 845 29.0
OB01G52560 Oryza brachyantha HOM04x5M002879 ORTHO04x5M003393 1.3e-53 214.9 824 30.6
HORVU3Hr1G104070 Hordeum vulgare HOM04x5M002879 ORTHO04x5M003393 1.9e-52 211.1 832 29.9
OsR498G0102668200.01 Oryza sativa ssp. indica HOM04x5M002879 ORTHO04x5M003393 8.9e-50 202.2 813 28.8
LOC_Os01g71256 Oryza sativa ssp. japonica HOM04x5M002879 ORTHO04x5M003393 6.4e-48 196.1 814 28.9
Sspon.03G0039020-2D Saccharum spontaneum HOM04x5M002879 ORTHO04x5M003393 2.4e-47 194.1 851 27.6
Mapoly0107s0042 Marchantia polymorpha HOM04x5M002879 ORTHO04x5M003393 4.7e-43 179.9 222 43.2
gene17671 Selaginella moellendorffii HOM04x5M002879 ORTHO04x5M003393 1.1e-42 178.7 292 38.7
Pp3c7_24754 Physcomitrium patens HOM04x5M002879 ORTHO04x5M003393 1.8e-42 177.9 258 39.9
Pp3c7_24750 Physcomitrium patens HOM04x5M002879 ORTHO04x5M003393 1.8e-42 177.9 258 39.9
gene9248 Selaginella moellendorffii HOM04x5M002879 ORTHO04x5M003393 3.1e-42 177.2 345 36.5
Pp3c11_4990 Physcomitrium patens HOM04x5M002879 ORTHO04x5M003393 2.9e-40 170.6 234 40.6
Sspon.03G0039020-1C Saccharum spontaneum HOM04x5M002879 ORTHO04x5M003393 5.6e-36 156.4 818 26.9
PH01000393G0240 Phyllostachys edulis HOM04x5M002879 ORTHO04x5M003393 7.1e-31 139.4 727 28.5
PH01000669G0180 Phyllostachys edulis HOM04x5M002879 ORTHO04x5M003393 1.6e-30 138.3 273 34.8
MisinT435200 Miscanthus sinensis HOM04x5M002879 ORTHO04x5M003393 1.5e-28 131.7 761 25.8
OsR498G0509729600.01 Oryza sativa ssp. indica HOM04x5M002879 ORTHO04x5M003393 5.3e-26 123.2 77 74.0
Zjn_sc00166.1.g00170.1.es.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002879 ORTHO04x5M003393 3.8e-16 90.5 102 53.9
ASH_gene44 Apostasia shenzhenica HOM04x5M006275 ORTHO04x5M008329 3.5e-14 84.0 199 28.1
ATR0721G141 Amborella trichopoda HOM04x5M006275 ORTHO04x5M008329 1.3e-13 82.0 195 28.2
Aco002377 Ananas comosus HOM04x5M006275 ORTHO04x5M008329 2.5e-12 77.8 195 25.1
Potri.006G045100 Populus trichocarpa HOM04x5M006275 ORTHO04x5M008329 1.3e-11 75.5 251 25.9
Pp3c4_1630 Physcomitrium patens HOM04x5M006275 ORTHO04x5M008329 6.2e-11 73.2 210 26.7
Pp3c4_1631 Physcomitrium patens HOM04x5M006275 ORTHO04x5M008329 6.2e-11 73.2 210 26.7
Ma03_g08650 Musa acuminata HOM04x5M006275 ORTHO04x5M008329 8.2e-11 72.8 195 26.2
Bradi2g27097 Brachypodium distachyon HOM04x5M006275 ORTHO04x5M008329 1.4e-10 72.0 196 24.0
Solyc04g017650.2 Solanum lycopersicum HOM04x5M006275 ORTHO04x5M008329 3.4e-09 67.4 293 23.9
Zm00001d033513 Zea mays B73 HOM04x5M002879 ORTHO04x5M021304 1.0e-08 65.9 60 58.3

Amborella trichopoda (2 genes)
Ananas comosus (3 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (3 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (2 genes)
Hordeum vulgare (2 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (5 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (2 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (5 genes)
Picea abies (1 genes)
Populus trichocarpa (3 genes)
Saccharum spontaneum (5 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (2 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (2 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (6 genes)
Triticum turgidum (4 genes)
Vitis vinifera (1 genes)
Zea mays B73 (4 genes)
Zea mays B104 (3 genes)
Zea mays PH207 (3 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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