Monocots PLAZA 4.5 : Interactive Phylogenetics Module

Interactive Phylogenetics Module

Gene Id: Seita.2G354700

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If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

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Genes

Gene ID	Organism	Homologous gene family	Orthologous gene family	E-value	Bitscore	Alignment Length	Identity Percentage
Seita.2G354700	Setaria italica	HOM04x5M006888	ORTHO04x5M008419	1.4e-224	781.9	561	100.0
Sobic.002G341100	Sorghum bicolor	HOM04x5M006888	ORTHO04x5M008419	3.5e-175	617.8	562	81.0
Sspon.02G0005140-1A	Saccharum spontaneum	HOM04x5M006888	ORTHO04x5M008419	1.3e-174	615.9	562	81.3
MisinT311500	Miscanthus sinensis	HOM04x5M006888	ORTHO04x5M008419	2.9e-174	614.8	562	81.3
Sspon.02G0005140-2B	Saccharum spontaneum	HOM04x5M006888	ORTHO04x5M008419	2.9e-174	614.8	562	81.3
Pgl_GLEAN_10015811	Cenchrus americanus	HOM04x5M000354	ORTHO04x5M002431	2.0e-170	602.1	528	89.2
Zm00007a00040219	Zea mays B104	HOM04x5M006888	ORTHO04x5M008419	1.0e-166	589.7	562	77.0
Zm00001d006606	Zea mays B73	HOM04x5M006888	ORTHO04x5M000946	4.0e-163	577.8	564	77.8
Misin03G324100	Miscanthus sinensis	HOM04x5M006888	ORTHO04x5M008419	5.7e-162	573.9	562	78.5
Zm00008a029109	Zea mays PH207	HOM04x5M006888	ORTHO04x5M008419	5.7e-162	573.9	553	76.7
Zm00001d021810	Zea mays B73	HOM04x5M000354	ORTHO04x5M008419	1.2e-159	566.2	598	72.4
Zm00008a009570	Zea mays PH207	HOM04x5M006888	ORTHO04x5M008419	1.2e-135	486.5	529	74.9
PH01003906G0090	Phyllostachys edulis	HOM04x5M006888	ORTHO04x5M008419	4.0e-123	444.9	569	51.8
OB07G24680	Oryza brachyantha	HOM04x5M006888	ORTHO04x5M008419	1.1e-120	436.8	567	49.7
PH01000363G0270	Phyllostachys edulis	HOM04x5M006888	ORTHO04x5M002431	1.9e-104	382.9	532	48.5
Zm00007a00010553	Zea mays B104	HOM04x5M006888	ORTHO04x5M008419	2.6e-98	362.5	237	83.5
Bradi1g24580	Brachypodium distachyon	HOM04x5M006888	ORTHO04x5M008419	3.2e-96	355.5	489	48.3
Zjn_sc00001.1.g06600.1.sm.mkhc	Zoysia japonica ssp. nagirizaki	HOM04x5M006888	ORTHO04x5M008419	4.6e-95	351.7	570	49.5
LP000741	Lolium perenne	HOM04x5M006888	ORTHO04x5M008419	8.7e-94	347.4	489	47.6
LOC_Os07g37800	Oryza sativa ssp. japonica	HOM04x5M006888	ORTHO04x5M008419	5.3e-83	311.6	564	41.1
TraesCS2B02G229800	Triticum aestivum	HOM04x5M006888	ORTHO04x5M008419	4.6e-79	298.5	487	48.0
TRITD2Bv1G083420	Triticum turgidum	HOM04x5M006888	ORTHO04x5M008419	4.6e-79	298.5	487	48.0
TraesCS2A02G202700	Triticum aestivum	HOM04x5M006888	ORTHO04x5M008419	8.8e-78	294.3	487	47.6
TRITD2Av1G074100	Triticum turgidum	HOM04x5M006888	ORTHO04x5M008419	8.8e-78	294.3	487	47.6
TraesCS2D02G213000	Triticum aestivum	HOM04x5M006888	ORTHO04x5M008419	2.8e-76	289.3	649	40.5
Zm00008a026038	Zea mays PH207	HOM04x5M000606	ORTHO04x5M000852	1.1e-51	207.6	180	68.3
Oropetium_20150105_16539	Oropetium thomaeum	HOM04x5M006888	ORTHO04x5M008419	1.2e-50	204.1	223	55.6
Zm00001d031299	Zea mays B73	HOM04x5M006888	ORTHO04x5M008419	1.5e-48	197.2	176	67.0
Zm00001d018373	Zea mays B73	HOM04x5M006888	ORTHO04x5M008419	1.5e-48	197.2	176	67.0
Zm00007a00051158	Zea mays B104	HOM04x5M006888	ORTHO04x5M008419	1.5e-48	197.2	176	67.0
Zm00007a00047365	Zea mays B104	HOM04x5M006888	ORTHO04x5M008419	1.5e-48	197.2	176	67.0
p5.00_sc00154_p0058	Elaeis guineensis	HOM04x5M006888	ORTHO04x5M008419	2.0e-45	186.8	575	32.5
Aco009146	Ananas comosus	HOM04x5M006888	ORTHO04x5M008419	7.3e-32	141.7	599	29.2
HORVU2Hr1G039990	Hordeum vulgare	HOM04x5M006888	ORTHO04x5M008419	1.6e-31	140.6	310	36.5
Zm00008a024306	Zea mays PH207	HOM04x5M000032	ORTHO04x5M008419	4.0e-30	136.0	99	74.7
CALSI_Maker00044427	Calamus simplicifolius	HOM04x5M006888	ORTHO04x5M008419	2.2e-28	130.2	572	28.7
CALSI_Maker00019150	Calamus simplicifolius	HOM04x5M006888	ORTHO04x5M008419	1.3e-25	120.9	435	32.2
OsR498G0714588000.01	Oryza sativa ssp. indica	HOM04x5M006888	ORTHO04x5M008419	6.6e-25	118.6	233	39.5
Zm00001d038498	Zea mays B73	HOM04x5M006888	ORTHO04x5M008419	1.9e-24	117.1	115	63.5
Potri.004G036900	Populus trichocarpa	HOM04x5M006888	ORTHO04x5M008419	2.5e-24	116.7	544	26.8
evm.TU.AsparagusV1_03.2223.V1.1	Asparagus officinalis	HOM04x5M006888	ORTHO04x5M008419	1.2e-23	114.4	429	30.8
ATR0693G270	Amborella trichopoda	HOM04x5M002570	ORTHO04x5M002687	1.1e-22	111.3	563	26.6
AT1G61215	Arabidopsis thaliana	HOM04x5M006888	ORTHO04x5M008419	3.1e-22	109.8	564	26.8
Spipo14G0058400	Spirodela polyrhiza	HOM04x5M006888	ORTHO04x5M008419	1.7e-20	104.0	504	25.8
Solyc10g009160.2	Solanum lycopersicum	HOM04x5M006888	ORTHO04x5M008419	5.4e-19	99.0	462	26.6
Zjn_sc00008.1.g10910.1.sm.mkhc	Zoysia japonica ssp. nagirizaki	HOM04x5M006888	ORTHO04x5M008419	1.1e-16	91.3	52	86.5
p5.00_sc00259_p0022	Elaeis guineensis	HOM04x5M006888	ORTHO04x5M008419	1.2e-15	87.8	111	45.0
p5.00_sc00259_p0021	Elaeis guineensis	HOM04x5M006888	ORTHO04x5M008419	1.2e-15	87.8	111	45.0
PAB00018157	Picea abies	HOM04x5M002570	ORTHO04x5M002687	1.4e-11	74.3	100	45.0
Solyc02g078810.2	Solanum lycopersicum	HOM04x5M006888	ORTHO04x5M008419	1.4e-11	74.3	569	25.7
Bradi3g40060	Brachypodium distachyon	HOM04x5M002570	ORTHO04x5M002687	2.7e-10	70.1	109	41.3
Sspon.02G0037080-1B	Saccharum spontaneum	HOM04x5M002570	ORTHO04x5M002687	6.0e-10	68.9	108	38.9
Sspon.02G0037080-2C	Saccharum spontaneum	HOM04x5M002570	ORTHO04x5M002687	1.0e-09	68.2	123	35.8
Pp3c17_1160	Physcomitrium patens	HOM04x5M002570	ORTHO04x5M002687	1.7e-09	67.4	115	40.0
Pp3c17_1175	Physcomitrium patens	HOM04x5M002570	ORTHO04x5M002687	1.7e-09	67.4	115	40.0
Sspon.02G0037080-3D	Saccharum spontaneum	HOM04x5M002570	ORTHO04x5M002687	2.3e-09	67.0	119	36.1
LOC_Os08g39980	Oryza sativa ssp. japonica	HOM04x5M002570	ORTHO04x5M002687	3.0e-09	66.6	121	38.0
OsR498G0816445800.01	Oryza sativa ssp. indica	HOM04x5M002570	ORTHO04x5M002687	3.0e-09	66.6	121	38.0
Misin04G229900	Miscanthus sinensis	HOM04x5M002570	ORTHO04x5M002687	3.9e-09	66.2	123	35.0
Zm00007a00037760	Zea mays B104	HOM04x5M003042	ORTHO04x5M008419	3.9e-09	66.2	63	63.5
PAB00022580	Picea abies	HOM04x5M002570	ORTHO04x5M002687	5.1e-09	65.9	202	32.2
PAB00062047	Picea abies	HOM04x5M002570	ORTHO04x5M002687	5.1e-09	65.9	202	32.2
Sobic.002G248600	Sorghum bicolor	HOM04x5M002570	ORTHO04x5M002687	5.1e-09	65.9	117	35.9
MisinT266000	Miscanthus sinensis	HOM04x5M002570	ORTHO04x5M002687	8.6e-09	65.1	118	35.6
p5.00_sc00020_p0160	Elaeis guineensis	HOM04x5M002570	ORTHO04x5M002687	1.9e-08	63.9	168	32.7
TraesCS7A02G247200	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	2.5e-08	63.5	159	32.1
ASH_gene16039	Apostasia shenzhenica	HOM04x5M002570	ORTHO04x5M002687	3.3e-08	63.2	110	37.3
PH01000150G0150	Phyllostachys edulis	HOM04x5M002570	ORTHO04x5M002687	3.3e-08	63.2	116	32.8
gene5260	Selaginella moellendorffii	HOM04x5M002570	ORTHO04x5M002687	3.3e-08	63.2	106	34.9
Zjn_sc00695.1.g00010.1.am.mk	Zoysia japonica ssp. nagirizaki	HOM04x5M006888	ORTHO04x5M008419	3.3e-08	63.2	36	88.9
Bradi4g33820	Brachypodium distachyon	HOM04x5M002570	ORTHO04x5M002687	4.3e-08	62.8	172	32.6
Seita.6G206100	Setaria italica	HOM04x5M002570	ORTHO04x5M002687	4.3e-08	62.8	120	36.7
TraesCS7B02G144300	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	4.3e-08	62.8	159	32.7
Seita.2G254700	Setaria italica	HOM04x5M002570	ORTHO04x5M002687	5.6e-08	62.4	149	30.9
gene2213	Selaginella moellendorffii	HOM04x5M002570	ORTHO04x5M002687	5.6e-08	62.4	106	34.9
TraesCS7D02G245800	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	5.6e-08	62.4	159	32.1
HORVU7Hr1G050770	Hordeum vulgare	HOM04x5M002570	ORTHO04x5M002687	9.6e-08	61.6	160	32.5
TraesCS5B02G266200	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	9.6e-08	61.6	173	31.2
TRITD5Bv1G149570	Triticum turgidum	HOM04x5M002570	ORTHO04x5M002687	9.6e-08	61.6	173	31.2
OB09G21390	Oryza brachyantha	HOM04x5M002570	ORTHO04x5M002687	1.2e-07	61.2	129	33.3
AT2G44430	Arabidopsis thaliana	HOM04x5M002570	ORTHO04x5M002687	1.6e-07	60.8	134	29.9
p5.00_sc00037_p0129	Elaeis guineensis	HOM04x5M002570	ORTHO04x5M002687	1.6e-07	60.8	106	37.7
Ma08_g26310	Musa acuminata	HOM04x5M002570	ORTHO04x5M002687	1.6e-07	60.8	112	34.8
HORVU5Hr1G073540	Hordeum vulgare	HOM04x5M002570	ORTHO04x5M002687	2.1e-07	60.5	168	31.5
HORVU5Hr1G073580	Hordeum vulgare	HOM04x5M002570	ORTHO04x5M002687	2.1e-07	60.5	168	31.5
LOC_Os09g31454	Oryza sativa ssp. japonica	HOM04x5M002570	ORTHO04x5M002687	2.1e-07	60.5	157	31.2
OsR498G0917730800.01	Oryza sativa ssp. indica	HOM04x5M002570	ORTHO04x5M002687	2.1e-07	60.5	157	31.2
CALSI_Maker00038910	Calamus simplicifolius	HOM04x5M002570	ORTHO04x5M002687	2.8e-07	60.1	102	35.3
AT2G42150	Arabidopsis thaliana	HOM04x5M002570	ORTHO04x5M002687	3.6e-07	59.7	104	35.6
GSVIVG01001371001	Vitis vinifera	HOM04x5M002570	ORTHO04x5M002687	3.6e-07	59.7	97	35.1
p5.00_sc00131_p0015	Elaeis guineensis	HOM04x5M002570	ORTHO04x5M002687	4.7e-07	59.3	110	34.5
TraesCS5D02G274400	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	4.7e-07	59.3	174	30.5
TraesCS5A02G266600	Triticum aestivum	HOM04x5M002570	ORTHO04x5M002687	8.1e-07	58.5	176	30.1
Zm00001d020947	Zea mays B73	HOM04x5M002570	ORTHO04x5M002687	8.1e-07	58.5	187	27.8
Zm00007a00035265	Zea mays B104	HOM04x5M002570	ORTHO04x5M002687	8.1e-07	58.5	187	27.8
Zm00008a028437	Zea mays PH207	HOM04x5M002570	ORTHO04x5M002687	8.1e-07	58.5	187	27.8
LP013034	Lolium perenne	HOM04x5M002570	ORTHO04x5M002687	1.1e-06	58.2	136	33.8
Solyc01g006470.1	Solanum lycopersicum	HOM04x5M002570	ORTHO04x5M002687	1.1e-06	58.2	98	31.6
Zm00001d031454	Zea mays B73	HOM04x5M002570	ORTHO04x5M002687	1.8e-06	57.4	115	37.4
Zm00007a00022852	Zea mays B104	HOM04x5M002570	ORTHO04x5M002687	1.8e-06	57.4	115	37.4
ATR0605G035	Amborella trichopoda	HOM04x5M002570	ORTHO04x5M002687	2.4e-06	57.0	65	36.9
Misin07G233600	Miscanthus sinensis	HOM04x5M002570	ORTHO04x5M002687	3.1e-06	56.6	122	35.2
Misin13G182000	Miscanthus sinensis	HOM04x5M002570	ORTHO04x5M002687	3.1e-06	56.6	119	35.3
Oropetium_20150105_05500	Oropetium thomaeum	HOM04x5M002570	ORTHO04x5M002687	3.1e-06	56.6	104	34.6
CALSI_Maker00032927	Calamus simplicifolius	HOM04x5M002570	ORTHO04x5M002687	4.0e-06	56.2	110	33.6
Pgl_GLEAN_10002113	Cenchrus americanus	HOM04x5M002570	ORTHO04x5M002687	4.0e-06	56.2	111	31.5
PH01000594G0730	Phyllostachys edulis	HOM04x5M002570	ORTHO04x5M002687	4.0e-06	56.2	114	32.5
Sobic.007G209500	Sorghum bicolor	HOM04x5M002570	ORTHO04x5M002687	4.0e-06	56.2	118	35.6
TRITD7Av1G092980	Triticum turgidum	HOM04x5M002570	ORTHO04x5M002687	4.0e-06	56.2	123	32.5
Zjn_sc00015.1.g05520.1.am.mk	Zoysia japonica ssp. nagirizaki	HOM04x5M002412	ORTHO04x5M002551	4.0e-06	56.2	89	37.1
Zjn_sc00008.1.g09320.1.am.mk	Zoysia japonica ssp. nagirizaki	HOM04x5M002412	ORTHO04x5M002551	4.0e-06	56.2	152	28.9
LP030104	Lolium perenne	HOM04x5M002570	ORTHO04x5M002687	6.9e-06	55.5	122	33.6

External Sequences (optional)

External Sequences Type

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MSA algorithm
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