Interactive Phylogenetics Module

Gene Id
Potri.004G080100

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.004G080100 Populus trichocarpa HOM04x5M005596 ORTHO04x5M007845 6.3e-184 646.0 327 100.0
Solyc03g007980.1 Solanum lycopersicum HOM04x5M005596 ORTHO04x5M007845 8.3e-152 539.3 332 83.7
AT5G24020 Arabidopsis thaliana HOM04x5M005596 ORTHO04x5M007845 3.3e-148 527.3 291 90.4
Ma09_g23980 Musa acuminata HOM04x5M005596 ORTHO04x5M007845 1.8e-143 511.5 309 82.5
ASH_gene17229 Apostasia shenzhenica HOM04x5M005596 ORTHO04x5M007845 5.4e-143 510.0 324 80.6
CALSI_Maker00047097 Calamus simplicifolius HOM04x5M005596 ORTHO04x5M007845 2.3e-141 504.6 324 79.6
p5.00_sc00122_p0047 Elaeis guineensis HOM04x5M005596 ORTHO04x5M007845 1.2e-139 498.8 286 84.6
p5.00_sc00013_p0082 Elaeis guineensis HOM04x5M005596 ORTHO04x5M007845 1.2e-139 498.8 286 85.0
Zosma76g00500 Zostera marina HOM04x5M005596 ORTHO04x5M007845 1.6e-139 498.4 332 78.0
Spipo11G0017000 Spirodela polyrhiza HOM04x5M005596 ORTHO04x5M007845 8.0e-139 496.1 326 78.5
Pp3c1_24820 Physcomitrium patens HOM04x5M005596 ORTHO04x5M007845 1.4e-135 485.3 284 82.4
gene1571 Selaginella moellendorffii HOM04x5M005596 ORTHO04x5M007845 1.4e-135 485.3 289 82.0
gene33091 Selaginella moellendorffii HOM04x5M005596 ORTHO04x5M007845 1.4e-135 485.3 289 82.0
Pp3c2_15820 Physcomitrium patens HOM04x5M005596 ORTHO04x5M007845 1.9e-135 485.0 284 82.0
PEQU_39653 Phalaenopsis equestris HOM04x5M005596 ORTHO04x5M007845 1.6e-134 481.9 293 82.9
ATR0661G312 Amborella trichopoda HOM04x5M005596 ORTHO04x5M007845 3.9e-133 477.2 326 74.5
Mapoly0042s0122 Marchantia polymorpha HOM04x5M005596 ORTHO04x5M007845 3.9e-117 424.1 245 84.1
Sspon.08G0013180-3D Saccharum spontaneum HOM04x5M005596 ORTHO04x5M007845 7.6e-113 409.8 277 74.7
Misin19G009300 Miscanthus sinensis HOM04x5M005596 ORTHO04x5M007845 2.2e-112 408.3 278 74.8
HORVU7Hr1G001800 Hordeum vulgare HOM04x5M005596 ORTHO04x5M007845 2.9e-112 407.9 325 67.1
MisinT155000 Miscanthus sinensis HOM04x5M005596 ORTHO04x5M007845 2.9e-112 407.9 278 74.8
LOC_Os06g01690 Oryza sativa ssp. japonica HOM04x5M005596 ORTHO04x5M007845 3.8e-112 407.5 307 69.4
OsR498G0611479700.01 Oryza sativa ssp. indica HOM04x5M005596 ORTHO04x5M007845 3.8e-112 407.5 307 69.4
TraesCS4A02G474300 Triticum aestivum HOM04x5M005596 ORTHO04x5M007845 6.4e-112 406.8 278 74.8
TraesCS7D02G014700 Triticum aestivum HOM04x5M005596 ORTHO04x5M007845 6.4e-112 406.8 278 74.8
Sobic.010G004400 Sorghum bicolor HOM04x5M005596 ORTHO04x5M007845 1.4e-111 405.6 312 68.9
Sspon.08G0013180-2B Saccharum spontaneum HOM04x5M005596 ORTHO04x5M007845 1.9e-111 405.2 277 74.7
Seita.4G004700 Setaria italica HOM04x5M005596 ORTHO04x5M007845 2.4e-111 404.8 277 74.7
Sspon.08G0013180-1A Saccharum spontaneum HOM04x5M005596 ORTHO04x5M007845 4.2e-111 404.1 315 67.6
Bradi1g52100 Brachypodium distachyon HOM04x5M005596 ORTHO04x5M007845 7.1e-111 403.3 278 73.4
Zjn_sc00184.1.g00080.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005596 ORTHO04x5M007845 7.1e-111 403.3 277 74.0
Oropetium_20150105_16871 Oropetium thomaeum HOM04x5M005596 ORTHO04x5M007845 4.6e-110 400.6 310 67.7
Aco017507 Ananas comosus HOM04x5M005596 ORTHO04x5M007845 1.6e-107 392.1 295 70.5
Zm00001d035898 Zea mays B73 HOM04x5M005596 ORTHO04x5M007845 3.1e-106 387.9 259 74.9
Zm00007a00040093 Zea mays B104 HOM04x5M005596 ORTHO04x5M007845 3.1e-106 387.9 259 74.9
Zm00008a024081 Zea mays PH207 HOM04x5M005596 ORTHO04x5M007845 3.1e-106 387.9 259 74.9
PAB00051758 Picea abies HOM04x5M005596 ORTHO04x5M007845 3.1e-98 361.3 227 78.4
TraesCS7A02G017400 Triticum aestivum HOM04x5M005596 ORTHO04x5M007845 4.6e-94 347.4 278 66.9
TRITD7Av1G003730 Triticum turgidum HOM04x5M005596 ORTHO04x5M007845 4.6e-94 347.4 278 66.9
TRITD4Av1G258740 Triticum turgidum HOM04x5M005596 ORTHO04x5M007845 4.6e-94 347.4 278 66.9
Pgl_GLEAN_10021367 Cenchrus americanus HOM04x5M005596 ORTHO04x5M007845 3.1e-90 334.7 227 73.6
Zosma313g00320 Zostera marina HOM04x5M005596 ORTHO04x5M007845 1.2e-89 332.8 205 81.0
Cre12.g522950 Chlamydomonas reinhardtii HOM04x5M005596 ORTHO04x5M007845 3.6e-78 294.7 267 56.9
LP029559 Lolium perenne HOM04x5M005596 ORTHO04x5M007845 1.7e-72 275.8 191 72.8
MCO05G507 Micromonas commoda HOM04x5M005596 ORTHO04x5M007845 1.6e-70 269.2 237 61.6
PEQU_28657 Phalaenopsis equestris HOM04x5M005596 ORTHO04x5M007845 2.0e-41 172.6 95 90.5
evm.TU.AsparagusV1_01.1927.V1.1 Asparagus officinalis HOM04x5M005596 ORTHO04x5M007845 8.0e-38 160.6 90 86.7
Zosma280g00110 Zostera marina HOM04x5M005596 ORTHO04x5M007845 3.1e-34 148.7 86 84.9
Zosma70g00630 Zostera marina HOM04x5M005596 ORTHO04x5M007845 6.4e-27 124.4 68 88.2
Pp3c14_14070 Physcomitrium patens HOM04x5M005596 ORTHO04x5M171150 3.6e-14 82.0 114 49.1
MCO11G317 Micromonas commoda HOM04x5M005121 ORTHO04x5M006545 2.7e-09 65.9 265 26.4
Zm00007a00051998 Zea mays B104 HOM04x5M005596 ORTHO04x5M029970 2.5e-07 59.3 62 53.2
AT4G19540 Arabidopsis thaliana HOM04x5M001801 ORTHO04x5M006545 3.3e-07 58.9 258 22.5
gene6627 Selaginella moellendorffii HOM04x5M001801 ORTHO04x5M006545 3.3e-07 58.9 261 24.5
Solyc06g083990.2 Solanum lycopersicum HOM04x5M001801 ORTHO04x5M006545 9.5e-07 57.4 278 24.5
GSVIVG01000762001 Vitis vinifera HOM04x5M001801 ORTHO04x5M006545 9.5e-07 57.4 260 25.0
Zjn_sc00176.1.g00230.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M005596 ORTHO04x5M029970 9.5e-07 57.4 58 50.0
GSVIVG01001845001 Vitis vinifera HOM04x5M001801 ORTHO04x5M004192 1.6e-06 56.6 268 22.4
Ma08_g29320 Musa acuminata HOM04x5M001801 ORTHO04x5M004192 3.6e-06 55.5 296 21.3
OB03G34610 Oryza brachyantha HOM04x5M001801 ORTHO04x5M006545 4.7e-06 55.1 268 22.8
gene12478 Selaginella moellendorffii HOM04x5M001801 ORTHO04x5M006545 4.7e-06 55.1 269 23.8
p5.00_sc00027_p0016 Elaeis guineensis HOM04x5M001801 ORTHO04x5M006545 8.1e-06 54.3 268 22.4
Mapoly0200s0003 Marchantia polymorpha HOM04x5M001801 ORTHO04x5M006545 8.1e-06 54.3 240 27.1

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (2 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (2 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (2 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (2 genes)
Phyllostachys edulis (0 genes)
Physcomitrium patens (3 genes)
Picea abies (1 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (3 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (1 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (2 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (4 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings