Interactive Phylogenetics Module

Gene Id
LOC_Os07g07260

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
LOC_Os07g07260 Oryza sativa ssp. japonica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1501.5 736 100.0
OsR498G0713585300.01 Oryza sativa ssp. indica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1498.4 736 99.7
OB07G13280 Oryza brachyantha HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1454.9 736 96.7
Sobic.002G112700 Sorghum bicolor HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1374.8 734 90.2
Misin04G109200 Miscanthus sinensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1372.1 734 90.1
HORVU3Hr1G013640 Hordeum vulgare HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1371.7 736 89.7
Bradi1g29020 Brachypodium distachyon HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1370.9 734 90.1
Misin03G098200 Miscanthus sinensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1369.8 734 90.1
TraesCS3A02G076400 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1369.8 736 89.5
TraesCS3B02G090300 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1368.6 736 89.5
Zm00008a008470 Zea mays PH207 HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1368.2 734 89.8
Seita.2G110200 Setaria italica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1367.1 734 89.4
Sspon.02G0020200-1A Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1359.7 733 90.2
LP027001 Lolium perenne HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1359.4 734 89.0
TraesCS3D02G076500 Triticum aestivum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1357.8 736 88.7
Aco003438 Ananas comosus HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1298.1 734 83.7
Zm00001d005157 Zea mays B73 HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1286.6 734 85.6
p5.00_sc00006_p0154 Elaeis guineensis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1281.2 732 83.3
CALSI_Maker00005878 Calamus simplicifolius HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1268.4 734 82.0
Sspon.02G0020200-3C Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1256.5 723 85.8
TRITD3Av1G021090 Triticum turgidum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1256.1 736 83.8
TRITD3Bv1G024720 Triticum turgidum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1253.4 736 83.7
evm.TU.AsparagusV1_07.3669.V1.1 Asparagus officinalis HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1241.9 734 81.1
Ma02_g07730 Musa acuminata HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1240.3 734 80.5
Spipo4G0085100 Spirodela polyrhiza HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1233.8 734 79.6
PEQU_08732 Phalaenopsis equestris HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1203.0 735 77.7
Zosma8g00780 Zostera marina HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1201.4 694 81.4
GSVIVG01019608001 Vitis vinifera HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1167.9 735 76.5
Potri.001G087400 Populus trichocarpa HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1164.8 734 75.9
Potri.003G143700 Populus trichocarpa HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1159.4 734 76.0
Solyc08g082830.2 Solanum lycopersicum HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1150.2 735 74.8
ATR1098G082 Amborella trichopoda HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1130.5 694 76.1
ASH_gene8283 Apostasia shenzhenica HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1114.4 659 79.7
AT1G55090 Arabidopsis thaliana HOM04x5M005046 ORTHO04x5M006164 0.0e+00 1107.4 734 71.8
gene17841 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 4.3e-289 996.5 735 65.3
gene29750 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 7.3e-289 995.7 735 65.4
Mapoly0035s0052 Marchantia polymorpha HOM04x5M005046 ORTHO04x5M006164 6.2e-288 992.6 742 65.8
MCO17G006 Micromonas commoda HOM04x5M005046 ORTHO04x5M006164 4.7e-264 913.3 695 63.2
Pp3c17_21910 Physcomitrium patens HOM04x5M005046 ORTHO04x5M006164 7.1e-260 899.4 672 65.8
gene12860 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 9.6e-257 889.0 697 61.8
gene4078 Selaginella moellendorffii HOM04x5M005046 ORTHO04x5M006164 4.8e-256 886.7 697 61.7
Cre10.g435250 Chlamydomonas reinhardtii HOM04x5M005046 ORTHO04x5M006164 8.4e-237 822.8 783 53.9
Sspon.02G0020200-4D Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 5.2e-202 707.2 377 89.4
PH01002232G0290 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 5.0e-197 690.6 407 83.0
PH01002232G0310 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 5.2e-194 680.6 357 92.4
Oropetium_20150105_11453 Oropetium thomaeum HOM04x5M005046 ORTHO04x5M006164 6.6e-173 610.5 321 90.0
PAB00015820 Picea abies HOM04x5M005046 ORTHO04x5M006164 3.2e-167 591.7 417 70.5
Oropetium_20150105_11454 Oropetium thomaeum HOM04x5M005046 ORTHO04x5M006164 3.3e-164 581.6 317 89.6
Zm00007a00049707 Zea mays B104 HOM04x5M005046 ORTHO04x5M006164 2.5e-148 528.9 331 81.6
Zm00007a00051183 Zea mays B104 HOM04x5M005046 ORTHO04x5M006164 4.8e-139 498.0 264 88.3
PH01000031G0760 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 5.5e-127 458.0 277 83.8
Sspon.02G0020200-2B Saccharum spontaneum HOM04x5M005046 ORTHO04x5M006164 2.7e-102 375.9 199 94.0
PH01000031G0750 Phyllostachys edulis HOM04x5M005046 ORTHO04x5M006164 3.9e-56 222.6 118 88.1
Zjn_sc00077.1.g00130.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005046 ORTHO04x5M006164 1.9e-55 220.3 241 51.9
Pgl_GLEAN_10033649 Cenchrus americanus HOM04x5M005046 ORTHO04x5M006164 6.2e-30 135.6 66 97.0
Zjn_sc00077.1.g00140.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005046 ORTHO04x5M006164 1.5e-23 114.4 75 73.3
evm.TU.AsparagusV1_05.1844.V1.1 Asparagus officinalis HOM04x5M001700 ORTHO04x5M004467 7.3e-23 112.1 66 72.7
PAB00013173 Picea abies HOM04x5M005046 ORTHO04x5M006164 1.9e-18 97.4 65 66.2
Solyc06g071240.1 Solanum lycopersicum HOM04x5M005046 ORTHO04x5M006164 9.3e-18 95.1 128 45.3

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (4 genes)
Physcomitrium patens (1 genes)
Picea abies (2 genes)
Populus trichocarpa (2 genes)
Saccharum spontaneum (4 genes)
Selaginella moellendorffii (4 genes)
Setaria italica (1 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (2 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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