Interactive Phylogenetics Module

Gene Id
LOC_Os01g67920

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
LOC_Os01g67920 Oryza sativa ssp. japonica HOM04x5M005382 ORTHO04x5M006527 1.9e-240 834.3 501 100.0
OsR498G0102541400.01 Oryza sativa ssp. indica HOM04x5M005382 ORTHO04x5M006527 1.9e-240 834.3 501 100.0
OB01G49790 Oryza brachyantha HOM04x5M005382 ORTHO04x5M006527 2.0e-229 797.7 501 95.2
Seita.5G420200 Setaria italica HOM04x5M005382 ORTHO04x5M006527 5.4e-211 736.5 501 81.2
Sobic.003G394300 Sorghum bicolor HOM04x5M005382 ORTHO04x5M006527 3.5e-210 733.8 501 76.4
Bradi2g58077 Brachypodium distachyon HOM04x5M005382 ORTHO04x5M006527 1.3e-209 731.9 501 80.8
Zm00001d042450 Zea mays B73 HOM04x5M005382 ORTHO04x5M006527 1.5e-208 728.4 454 82.2
Zm00007a00017129 Zea mays B104 HOM04x5M005382 ORTHO04x5M006527 1.5e-208 728.4 454 82.2
Misin06G362700 Miscanthus sinensis HOM04x5M005382 ORTHO04x5M006527 1.9e-208 728.0 501 76.0
LP034953 Lolium perenne HOM04x5M005382 ORTHO04x5M006527 1.6e-207 724.9 500 80.6
Pgl_GLEAN_10010471 Cenchrus americanus HOM04x5M005382 ORTHO04x5M006527 8.1e-207 722.6 514 78.0
TraesCS3D02G383400 Triticum aestivum HOM04x5M005382 ORTHO04x5M006527 1.2e-194 682.2 502 76.9
TraesCS3A02G390800 Triticum aestivum HOM04x5M005382 ORTHO04x5M006527 1.6e-194 681.8 502 76.9
TraesCS3B02G422600 Triticum aestivum HOM04x5M005382 ORTHO04x5M006527 4.6e-194 680.2 501 76.2
HORVU3Hr1G088460 Hordeum vulgare HOM04x5M005382 ORTHO04x5M006527 1.3e-193 678.7 454 82.6
HORVU3Hr1G088480 Hordeum vulgare HOM04x5M005382 ORTHO04x5M006527 3.3e-192 674.1 455 82.4
TRITD3Av1G230650 Triticum turgidum HOM04x5M005382 ORTHO04x5M006527 8.1e-191 669.5 523 73.8
TRITD3Bv1G217010 Triticum turgidum HOM04x5M005382 ORTHO04x5M006527 7.6e-189 662.9 501 74.9
Misin06G412600 Miscanthus sinensis HOM04x5M005382 ORTHO04x5M006527 3.7e-183 644.0 365 88.5
Zm00008a013007 Zea mays PH207 HOM04x5M005382 ORTHO04x5M006527 4.0e-182 640.6 454 74.7
PH01000229G0250 Phyllostachys edulis HOM04x5M005382 ORTHO04x5M006527 1.2e-181 639.0 573 66.8
Aco024203 Ananas comosus HOM04x5M005382 ORTHO04x5M006527 1.3e-177 625.5 455 69.9
Sspon.03G0028620-2C Saccharum spontaneum HOM04x5M005382 ORTHO04x5M006527 5.0e-172 607.1 738 50.4
Oropetium_20150105_13135 Oropetium thomaeum HOM04x5M005382 ORTHO04x5M006527 1.3e-169 599.0 438 73.1
Ma08_g08710 Musa acuminata HOM04x5M005382 ORTHO04x5M006527 1.8e-161 572.0 455 62.9
evm.TU.AsparagusV1_04.597.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 5.1e-161 570.5 453 63.4
PEQU_32184 Phalaenopsis equestris HOM04x5M005382 ORTHO04x5M006527 2.7e-154 548.1 455 59.8
GSVIVG01007574001 Vitis vinifera HOM04x5M005382 ORTHO04x5M006527 4.8e-151 537.3 454 61.0
Solyc06g071850.2 Solanum lycopersicum HOM04x5M005382 ORTHO04x5M006527 6.7e-145 516.9 456 58.1
AT5G63200 Arabidopsis thaliana HOM04x5M005382 ORTHO04x5M006527 8.3e-135 483.4 454 60.6
p5.00_sc00130_p0062 Elaeis guineensis HOM04x5M005382 ORTHO04x5M006527 1.4e-134 482.6 456 57.2
ATR0824G019 Amborella trichopoda HOM04x5M005382 ORTHO04x5M006527 5.0e-132 474.2 459 55.3
CALSI_Maker00005234 Calamus simplicifolius HOM04x5M005382 ORTHO04x5M006527 5.0e-132 474.2 430 59.3
PH01000031G1370 Phyllostachys edulis HOM04x5M005382 ORTHO04x5M006527 6.5e-132 473.8 520 54.8
Zosma79g00200 Zostera marina HOM04x5M005382 ORTHO04x5M006527 2.1e-130 468.8 454 53.7
Potri.012G092000 Populus trichocarpa HOM04x5M005382 ORTHO04x5M006527 2.3e-124 448.7 453 53.2
gene5094 Selaginella moellendorffii HOM04x5M005382 ORTHO04x5M006527 4.1e-110 401.4 460 47.4
gene7444 Selaginella moellendorffii HOM04x5M005382 ORTHO04x5M006527 4.1e-110 401.4 460 47.4
ASH_gene1600 Apostasia shenzhenica HOM04x5M005382 ORTHO04x5M006527 5.0e-108 394.4 454 48.0
Mapoly0013s0178 Marchantia polymorpha HOM04x5M005382 ORTHO04x5M006527 1.7e-103 379.4 458 45.0
Sspon.03G0028540-1B Saccharum spontaneum HOM04x5M000049 ORTHO04x5M006527 3.0e-92 342.0 253 72.3
Spipo4G0035200 Spirodela polyrhiza HOM04x5M005382 ORTHO04x5M006527 8.7e-76 287.3 282 53.9
Sspon.03G0000770-2B Saccharum spontaneum HOM04x5M004483 ORTHO04x5M005884 1.3e-60 236.9 156 77.6
Spipo4G0035300 Spirodela polyrhiza HOM04x5M005382 ORTHO04x5M006527 2.6e-43 179.5 145 62.8
PAB00064933 Picea abies HOM04x5M005382 ORTHO04x5M006527 2.4e-41 172.9 144 60.4
evm.TU.AsparagusV1_05.2410.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 2.1e-37 159.8 138 55.1
evm.TU.AsparagusV1_08.1960.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 6.1e-37 158.3 130 56.9
Zjn_sc00034.1.g03860.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M005382 ORTHO04x5M006527 1.2e-32 144.1 141 58.2
PAB00061745 Picea abies HOM04x5M005382 ORTHO04x5M006527 3.0e-28 129.4 122 54.1
evm.TU.AsparagusV1_08.2080.V1.1 Asparagus officinalis HOM04x5M005382 ORTHO04x5M006527 7.0e-25 118.2 98 54.1
PAB00034029 Picea abies HOM04x5M005382 ORTHO04x5M006527 2.5e-22 109.8 89 58.4
Oropetium_20150105_13136 Oropetium thomaeum HOM04x5M005382 ORTHO04x5M006527 2.1e-21 106.7 57 93.0
p5.00_sc00032_p0015 Elaeis guineensis HOM04x5M005382 ORTHO04x5M006527 2.4e-17 93.2 86 57.0
p5.00_sc00032_p0014 Elaeis guineensis HOM04x5M005382 ORTHO04x5M006527 3.4e-11 72.8 83 49.4
PAB00026557 Picea abies HOM04x5M005382 ORTHO04x5M006527 7.0e-09 65.1 64 53.1

Amborella trichopoda (1 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (4 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (1 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (2 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (1 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (0 genes)
Picea abies (4 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (3 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (1 genes)
Zea mays B104 (1 genes)
Zea mays PH207 (1 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (1 genes)

Program Settings