Interactive Phylogenetics Module

Gene Id
CALSI_Maker00004023

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CALSI_Maker00004023 Calamus simplicifolius HOM04x5M002748 ORTHO04x5M003002 1.5e-60 234.6 116 100.0
p5.00_sc00001_p0336 Elaeis guineensis HOM04x5M002748 ORTHO04x5M003002 1.4e-45 184.9 111 82.0
CALSI_Maker00015500 Calamus simplicifolius HOM04x5M002748 ORTHO04x5M003002 8.8e-40 165.6 104 81.7
p5.00_sc00018_p0074 Elaeis guineensis HOM04x5M002748 ORTHO04x5M003002 9.8e-31 135.6 117 65.0
Aco010739 Ananas comosus HOM04x5M002748 ORTHO04x5M003002 6.3e-30 132.9 85 75.3
ASH_gene11100 Apostasia shenzhenica HOM04x5M002748 ORTHO04x5M003002 6.3e-30 132.9 102 64.7
ATR1100G004 Amborella trichopoda HOM04x5M002748 ORTHO04x5M003002 3.1e-29 130.6 119 58.8
p5.00_sc00126_p0062 Elaeis guineensis HOM04x5M002748 ORTHO04x5M003002 3.1e-29 130.6 117 65.0
Potri.015G022700 Populus trichocarpa HOM04x5M002748 ORTHO04x5M003002 4.1e-29 130.2 115 57.4
PEQU_28957 Phalaenopsis equestris HOM04x5M002748 ORTHO04x5M003002 1.6e-28 128.3 114 58.8
CALSI_Maker00026837 Calamus simplicifolius HOM04x5M002748 ORTHO04x5M003002 2.0e-28 127.9 105 65.7
Solyc03g007430.2 Solanum lycopersicum HOM04x5M002748 ORTHO04x5M003002 2.3e-27 124.4 106 61.3
LOC_Os08g29720 Oryza sativa ssp. japonica HOM04x5M002748 ORTHO04x5M003002 5.0e-27 123.2 102 62.7
OsR498G0815981100.01 Oryza sativa ssp. indica HOM04x5M002748 ORTHO04x5M003002 5.0e-27 123.2 102 62.7
Bradi2g07390 Brachypodium distachyon HOM04x5M002748 ORTHO04x5M003002 8.6e-27 122.5 88 68.2
Potri.012G032100 Populus trichocarpa HOM04x5M002748 ORTHO04x5M003002 8.6e-27 122.5 107 58.9
Aco006809 Ananas comosus HOM04x5M002748 ORTHO04x5M003002 1.5e-26 121.7 107 59.8
Spipo26G0012000 Spirodela polyrhiza HOM04x5M002748 ORTHO04x5M003002 2.5e-26 120.9 101 60.4
TraesCS7B02G307300 Triticum aestivum HOM04x5M002748 ORTHO04x5M003002 2.5e-26 120.9 100 62.0
TraesCS7D02G400800 Triticum aestivum HOM04x5M002748 ORTHO04x5M003002 2.5e-26 120.9 100 62.0
TRITD7Bv1G168970 Triticum turgidum HOM04x5M002748 ORTHO04x5M003002 2.5e-26 120.9 100 62.0
HORVU7Hr1G095210 Hordeum vulgare HOM04x5M002748 ORTHO04x5M003002 3.3e-26 120.6 102 61.8
TraesCS7A02G407300 Triticum aestivum HOM04x5M002748 ORTHO04x5M003002 3.3e-26 120.6 100 61.0
TRITD7Av1G219600 Triticum turgidum HOM04x5M002748 ORTHO04x5M003002 3.3e-26 120.6 100 61.0
LP032744 Lolium perenne HOM04x5M002748 ORTHO04x5M003002 5.6e-26 119.8 88 67.0
GSVIVG01028734001 Vitis vinifera HOM04x5M002748 ORTHO04x5M003002 7.3e-26 119.4 99 63.6
OB08G21380 Oryza brachyantha HOM04x5M002748 ORTHO04x5M003002 9.5e-26 119.0 92 67.4
Ma08_g05610 Musa acuminata HOM04x5M002748 ORTHO04x5M003002 1.2e-25 118.6 101 61.4
Sspon.06G0006930-4D Saccharum spontaneum HOM04x5M002748 ORTHO04x5M003002 1.2e-25 118.6 100 64.0
Misin07G321200 Miscanthus sinensis HOM04x5M002748 ORTHO04x5M003002 1.6e-25 118.2 99 63.6
Sobic.007G118600 Sorghum bicolor HOM04x5M002748 ORTHO04x5M003002 1.6e-25 118.2 99 63.6
ATR0099G005 Amborella trichopoda HOM04x5M002748 ORTHO04x5M003002 2.1e-25 117.9 107 59.8
LP001024 Lolium perenne HOM04x5M002748 ORTHO04x5M003002 2.1e-25 117.9 99 62.6
Zm00008a016108 Zea mays PH207 HOM04x5M002748 ORTHO04x5M003002 2.8e-25 117.5 102 61.8
Zm00001d032268 Zea mays B73 HOM04x5M002748 ORTHO04x5M003002 3.6e-25 117.1 113 57.5
Zm00008a003829 Zea mays PH207 HOM04x5M002748 ORTHO04x5M003002 3.6e-25 117.1 113 57.5
Oropetium_20150105_17836 Oropetium thomaeum HOM04x5M002748 ORTHO04x5M003002 4.7e-25 116.7 92 63.0
PH01000443G0680 Phyllostachys edulis HOM04x5M002748 ORTHO04x5M003002 6.1e-25 116.3 127 49.6
Zm00007a00037853 Zea mays B104 HOM04x5M002748 ORTHO04x5M003002 6.1e-25 116.3 105 60.0
Zm00007a00051557 Zea mays B104 HOM04x5M002748 ORTHO04x5M003002 8.0e-25 115.9 116 56.0
Ma10_g21860 Musa acuminata HOM04x5M002748 ORTHO04x5M003002 1.8e-24 114.8 95 64.2
Bradi3g34820 Brachypodium distachyon HOM04x5M002748 ORTHO04x5M003002 2.3e-24 114.4 100 60.0
Zm00007a00036701 Zea mays B104 HOM04x5M002748 ORTHO04x5M003002 2.3e-24 114.4 89 65.2
Zm00008a038900 Zea mays PH207 HOM04x5M002748 ORTHO04x5M003002 2.3e-24 114.4 89 65.2
LOC_Os01g12470 Oryza sativa ssp. japonica HOM04x5M002748 ORTHO04x5M003002 4.0e-24 113.6 86 66.3
PAB00013489 Picea abies HOM04x5M004975 ORTHO04x5M003002 4.0e-24 113.6 110 55.5
Ma01_g23490 Musa acuminata HOM04x5M002748 ORTHO04x5M003002 1.5e-23 111.7 100 58.0
GSVIVG01027048001 Vitis vinifera HOM04x5M002748 ORTHO04x5M003002 2.0e-23 111.3 98 63.3
AT4G27940 Arabidopsis thaliana HOM04x5M002748 ORTHO04x5M003002 3.4e-23 110.5 105 54.3
Misin16G206100 Miscanthus sinensis HOM04x5M002748 ORTHO04x5M003002 3.4e-23 110.5 98 62.2
PH01003461G0070 Phyllostachys edulis HOM04x5M002748 ORTHO04x5M003002 9.8e-23 109.0 151 43.7
evm.TU.AsparagusV1_01.325.V1.1 Asparagus officinalis HOM04x5M002748 ORTHO04x5M003002 1.3e-22 108.6 113 52.2
Solyc01g095510.2 Solanum lycopersicum HOM04x5M002748 ORTHO04x5M003002 3.7e-22 107.1 107 55.1
Pgl_GLEAN_10002705 Cenchrus americanus HOM04x5M002748 ORTHO04x5M003002 6.4e-22 106.3 92 63.0
OsR498G0100453700.01 Oryza sativa ssp. indica HOM04x5M002748 ORTHO04x5M003002 8.3e-22 105.9 84 64.3
Zosma95g00540 Zostera marina HOM04x5M002748 ORTHO04x5M003002 3.2e-21 104.0 107 51.4
gene19482 Selaginella moellendorffii HOM04x5M002748 ORTHO04x5M003002 1.0e-19 99.0 98 58.2
gene21218 Selaginella moellendorffii HOM04x5M002748 ORTHO04x5M003002 1.0e-19 99.0 98 58.2
Potri.002G167700 Populus trichocarpa HOM04x5M002748 ORTHO04x5M003002 5.0e-19 96.7 99 55.6
Mapoly0008s0066 Marchantia polymorpha HOM04x5M002748 ORTHO04x5M003002 6.6e-19 96.3 103 53.4
TraesCS3B02G176600 Triticum aestivum HOM04x5M002748 ORTHO04x5M003002 2.5e-18 94.4 73 65.8
TraesCS3D02G157400 Triticum aestivum HOM04x5M002748 ORTHO04x5M003002 2.5e-18 94.4 72 66.7
TraesCS3A02G149300 Triticum aestivum HOM04x5M002748 ORTHO04x5M003002 2.5e-18 94.4 72 66.7
TRITD3Bv1G067100 Triticum turgidum HOM04x5M002748 ORTHO04x5M003002 2.5e-18 94.4 73 65.8
Zm00001d050253 Zea mays B73 HOM04x5M002748 ORTHO04x5M003002 2.5e-18 94.4 177 37.3
HORVU3Hr1G030340 Hordeum vulgare HOM04x5M002748 ORTHO04x5M003002 3.3e-18 94.0 72 66.7
Zosma41g00640 Zostera marina HOM04x5M002748 ORTHO04x5M003002 9.5e-18 92.4 110 51.8
Mapoly1502s0001 Marchantia polymorpha HOM04x5M038414 ORTHO04x5M003002 4.7e-17 90.1 103 50.5
Misin12G279600 Miscanthus sinensis HOM04x5M002748 ORTHO04x5M003002 1.4e-16 88.6 90 55.6
Sspon.06G0006930-1A Saccharum spontaneum HOM04x5M002748 ORTHO04x5M003002 3.1e-16 87.4 153 39.2
Sspon.06G0006930-2B Saccharum spontaneum HOM04x5M002748 ORTHO04x5M003002 3.4e-15 84.0 153 38.6
Pp3c8_22470 Physcomitrium patens HOM04x5M002748 ORTHO04x5M003002 7.5e-15 82.8 93 50.5
TRITD3Av1G060330 Triticum turgidum HOM04x5M002748 ORTHO04x5M003002 1.2e-12 75.5 61 62.3
Zm00001d026670 Zea mays B73 HOM04x5M002748 ORTHO04x5M003002 3.0e-11 70.9 46 73.9
Oropetium_20150105_02389 Oropetium thomaeum HOM04x5M002748 ORTHO04x5M003002 1.9e-10 68.2 51 70.6
Zjn_sc00015.1.g00040.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002748 ORTHO04x5M003002 2.5e-10 67.8 51 70.6
Zjn_sc00043.1.g04370.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M002748 ORTHO04x5M027258 4.3e-10 67.0 56 60.7
Misin13G087900 Miscanthus sinensis HOM04x5M002748 ORTHO04x5M003002 1.1e-08 62.4 39 69.2
evm.TU.AsparagusV1_01.3182.V1.1 Asparagus officinalis HOM04x5M002748 ORTHO04x5M003002 5.2e-08 60.1 39 61.5
Seita.6G133100 Setaria italica HOM04x5M002748 ORTHO04x5M003002 2.0e-07 58.2 38 68.4
MCO09G301 Micromonas commoda HOM04x5M002748 ORTHO04x5M003002 5.8e-07 56.6 113 37.2

Amborella trichopoda (2 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (2 genes)
Calamus simplicifolius (3 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (2 genes)
Lolium perenne (2 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (4 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (2 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (1 genes)
Picea abies (1 genes)
Populus trichocarpa (3 genes)
Saccharum spontaneum (3 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (2 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (6 genes)
Triticum turgidum (4 genes)
Vitis vinifera (2 genes)
Zea mays B73 (3 genes)
Zea mays B104 (3 genes)
Zea mays PH207 (3 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

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