Interactive Phylogenetics Module

Gene Id
CALSI_Maker00002203

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
CALSI_Maker00002203 Calamus simplicifolius HOM04x5M004163 ORTHO04x5M007218 0.0e+00 1174.8 616 100.0
CALSI_Maker00004382 Calamus simplicifolius HOM04x5M004163 ORTHO04x5M007218 0.0e+00 1091.6 558 100.0
p5.00_sc00018_p0193 Elaeis guineensis HOM04x5M004163 ORTHO04x5M007218 5.5e-282 972.6 559 87.7
evm.TU.AsparagusV1_Unassigned.783.V1.1 Asparagus officinalis HOM04x5M004163 ORTHO04x5M007218 4.5e-268 926.4 552 85.1
Ma07_g25440 Musa acuminata HOM04x5M004163 ORTHO04x5M007218 1.8e-261 904.4 552 83.7
Aco005889 Ananas comosus HOM04x5M004163 ORTHO04x5M007218 1.7e-259 897.9 568 80.8
PEQU_00877 Phalaenopsis equestris HOM04x5M004163 ORTHO04x5M007218 4.9e-254 879.8 556 79.0
Seita.3G344900 Setaria italica HOM04x5M004163 ORTHO04x5M007218 5.6e-250 866.3 580 76.4
ASH_gene10528 Apostasia shenzhenica HOM04x5M004163 ORTHO04x5M007218 8.9e-248 859.0 546 79.7
OB12G21860 Oryza brachyantha HOM04x5M004163 ORTHO04x5M007218 3.4e-247 857.1 603 74.3
Bradi4g05710 Brachypodium distachyon HOM04x5M004163 ORTHO04x5M007218 5.8e-247 856.3 585 75.0
Misin02G448300 Miscanthus sinensis HOM04x5M004163 ORTHO04x5M007218 9.8e-247 855.5 546 78.9
LOC_Os12g35290 Oryza sativa ssp. japonica HOM04x5M004163 ORTHO04x5M007218 1.3e-246 855.1 605 75.4
OsR498G1221772300.01 Oryza sativa ssp. indica HOM04x5M004163 ORTHO04x5M007218 1.3e-246 855.1 605 75.4
Oropetium_20150105_24110 Oropetium thomaeum HOM04x5M004163 ORTHO04x5M007218 1.7e-246 854.7 575 75.8
LP005885 Lolium perenne HOM04x5M004163 ORTHO04x5M007218 2.2e-246 854.4 509 82.5
PH01001009G0200 Phyllostachys edulis HOM04x5M004163 ORTHO04x5M007218 2.2e-246 854.4 564 77.0
Sobic.001G474400 Sorghum bicolor HOM04x5M004163 ORTHO04x5M007218 1.7e-243 844.7 541 78.2
TraesCS5D02G107800 Triticum aestivum HOM04x5M004163 ORTHO04x5M007218 2.3e-243 844.3 493 83.4
TraesCS5B02G101300 Triticum aestivum HOM04x5M004163 ORTHO04x5M007218 2.3e-243 844.3 493 83.4
Sspon.01G0005020-1A Saccharum spontaneum HOM04x5M004163 ORTHO04x5M007218 5.0e-243 843.2 504 82.5
HORVU5Hr1G025740 Hordeum vulgare HOM04x5M004163 ORTHO04x5M007218 1.5e-242 841.6 493 83.2
TraesCS5A02G095100 Triticum aestivum HOM04x5M004163 ORTHO04x5M007218 1.9e-242 841.3 493 83.2
TRITD5Av1G052480 Triticum turgidum HOM04x5M004163 ORTHO04x5M007218 1.9e-242 841.3 493 83.2
TRITD5Bv1G048250 Triticum turgidum HOM04x5M004163 ORTHO04x5M007218 1.9e-242 841.3 493 83.2
Zm00008a000605 Zea mays PH207 HOM04x5M004163 ORTHO04x5M007218 4.3e-242 840.1 541 77.8
Sspon.01G0005020-3D Saccharum spontaneum HOM04x5M004163 ORTHO04x5M007218 7.3e-242 839.3 504 82.3
Zm00001d028010 Zea mays B73 HOM04x5M004163 ORTHO04x5M007218 8.1e-241 835.9 541 77.8
Zm00007a00048341 Zea mays B104 HOM04x5M004163 ORTHO04x5M007218 8.1e-241 835.9 541 77.8
Potri.006G225500 Populus trichocarpa HOM04x5M004163 ORTHO04x5M007218 8.9e-240 832.4 543 76.6
Zm00001d048217 Zea mays B73 HOM04x5M004163 ORTHO04x5M007218 2.6e-239 830.9 555 75.3
PH01000674G0260 Phyllostachys edulis HOM04x5M004163 ORTHO04x5M007218 1.4e-237 825.1 547 77.3
Zm00007a00005660 Zea mays B104 HOM04x5M004163 ORTHO04x5M007218 1.4e-237 825.1 555 75.0
Pgl_GLEAN_10032527 Cenchrus americanus HOM04x5M004163 ORTHO04x5M007218 5.1e-235 816.6 556 75.4
Spipo21G0022900 Spirodela polyrhiza HOM04x5M004163 ORTHO04x5M007218 1.1e-234 815.5 537 76.9
Zosma292g00220 Zostera marina HOM04x5M004163 ORTHO04x5M007218 1.1e-234 815.5 555 73.9
GSVIVG01035413001 Vitis vinifera HOM04x5M004163 ORTHO04x5M007218 5.2e-232 806.6 504 78.8
Solyc01g087650.2 Solanum lycopersicum HOM04x5M004163 ORTHO04x5M007218 8.9e-232 805.8 519 76.5
ATR0686G037 Amborella trichopoda HOM04x5M004163 ORTHO04x5M007218 3.9e-227 790.4 558 73.5
Misin01G454000 Miscanthus sinensis HOM04x5M004163 ORTHO04x5M007218 5.4e-221 770.0 514 75.9
AT5G11980 Arabidopsis thaliana HOM04x5M004163 ORTHO04x5M007218 8.4e-214 746.1 462 79.2
Zjn_sc00038.1.g01460.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004163 ORTHO04x5M007218 5.3e-208 726.9 457 80.1
Sspon.01G0005020-2B Saccharum spontaneum HOM04x5M004163 ORTHO04x5M007218 7.9e-196 686.4 504 70.8
Mapoly0087s0038 Marchantia polymorpha HOM04x5M004163 ORTHO04x5M007218 5.0e-190 667.2 570 60.5
Pp3c10_11790 Physcomitrium patens HOM04x5M004163 ORTHO04x5M007218 5.7e-186 653.7 556 60.4
Zm00008a035954 Zea mays PH207 HOM04x5M004163 ORTHO04x5M007218 1.7e-177 625.5 429 73.2
gene8752 Selaginella moellendorffii HOM04x5M004163 ORTHO04x5M007218 8.2e-177 623.2 495 62.4
gene4235 Selaginella moellendorffii HOM04x5M004163 ORTHO04x5M007218 1.2e-175 619.4 512 60.9
Pp3c2_14420 Physcomitrium patens HOM04x5M004163 ORTHO04x5M007218 2.5e-149 531.9 485 55.5
PAB00042203 Picea abies HOM04x5M004163 ORTHO04x5M007218 2.6e-130 468.8 328 67.7
Ma03_g33650 Musa acuminata HOM04x5M004163 ORTHO04x5M007218 1.2e-108 396.7 376 61.7
Cre10.g439650 Chlamydomonas reinhardtii HOM04x5M004163 ORTHO04x5M007218 7.4e-93 344.4 528 37.9
MCO04G241 Micromonas commoda HOM04x5M004163 ORTHO04x5M007218 6.2e-84 314.7 455 40.2
PAB00037879 Picea abies HOM04x5M004163 ORTHO04x5M013611 2.2e-28 130.2 81 79.0
Zm00008a039726 Zea mays PH207 HOM04x5M004163 ORTHO04x5M013611 1.2e-26 124.4 80 75.0
Zm00007a00013703 Zea mays B104 HOM04x5M004163 ORTHO04x5M013611 2.0e-26 123.6 87 71.3
Zm00007a00032059 Zea mays B104 HOM04x5M004163 ORTHO04x5M013611 2.0e-26 123.6 87 71.3
Zm00001d006805 Zea mays B73 HOM04x5M004163 ORTHO04x5M013611 2.7e-26 123.2 77 76.6
Zm00001d053677 Zea mays B73 HOM04x5M004163 ORTHO04x5M013611 2.7e-26 123.2 77 76.6
Zm00007a00010507 Zea mays B104 HOM04x5M004163 ORTHO04x5M013611 2.7e-26 123.2 87 71.3
Zm00001d028871 Zea mays B73 HOM04x5M004163 ORTHO04x5M013611 3.5e-26 122.9 77 76.6
Zjn_sc00113.1.g00840.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M004163 ORTHO04x5M013611 2.5e-24 116.7 82 72.0
Ma03_g33660 Musa acuminata HOM04x5M004163 ORTHO04x5M094510 6.8e-14 82.0 86 53.5
ATR0009G024 Amborella trichopoda HOM04x5M004163 ORTHO04x5M052132 2.5e-08 63.5 65 50.8
ATR0009G028 Amborella trichopoda HOM04x5M004163 ORTHO04x5M054620 4.3e-08 62.8 43 67.4

Amborella trichopoda (3 genes)
Ananas comosus (1 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (1 genes)
Asparagus officinalis (1 genes)
Brachypodium distachyon (1 genes)
Calamus simplicifolius (2 genes)
Cenchrus americanus (1 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (1 genes)
Hordeum vulgare (1 genes)
Lolium perenne (1 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (2 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (1 genes)
Oryza brachyantha (1 genes)
Oryza sativa ssp. indica (1 genes)
Oryza sativa ssp. japonica (1 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (2 genes)
Physcomitrium patens (2 genes)
Picea abies (2 genes)
Populus trichocarpa (1 genes)
Saccharum spontaneum (3 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (1 genes)
Solanum lycopersicum (1 genes)
Sorghum bicolor (1 genes)
Spirodela polyrhiza (1 genes)
Triticum aestivum (3 genes)
Triticum turgidum (2 genes)
Vitis vinifera (1 genes)
Zea mays B73 (5 genes)
Zea mays B104 (5 genes)
Zea mays PH207 (3 genes)
Zostera marina (1 genes)
Zoysia japonica ssp. nagirizaki (2 genes)

Program Settings