Interactive Phylogenetics Module

Gene Id
Bradi3g40060

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
Bradi3g40060 Brachypodium distachyon HOM04x5M002570 ORTHO04x5M002687 3.1e-184 647.9 604 100.0
TraesCS7D02G245800 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 2.7e-92 342.4 584 63.9
TraesCS7A02G247200 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 5.2e-91 338.2 584 62.7
HORVU7Hr1G050770 Hordeum vulgare HOM04x5M002570 ORTHO04x5M002687 4.5e-87 325.1 587 58.3
TraesCS7B02G144300 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 7.7e-79 297.7 397 61.7
LP013034 Lolium perenne HOM04x5M002570 ORTHO04x5M002687 1.8e-75 286.6 406 61.8
Seita.6G206100 Setaria italica HOM04x5M002570 ORTHO04x5M002687 9.5e-69 264.2 593 45.9
Misin13G182000 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 6.2e-68 261.5 456 51.8
Misin07G233600 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 6.6e-62 241.5 452 48.7
Zm00001d031454 Zea mays B73 HOM04x5M002570 ORTHO04x5M002687 1.5e-61 240.4 461 45.3
Zm00007a00022852 Zea mays B104 HOM04x5M002570 ORTHO04x5M002687 1.5e-61 240.4 461 45.3
Sobic.007G209500 Sorghum bicolor HOM04x5M002570 ORTHO04x5M002687 5.6e-61 238.4 463 51.6
Sspon.06G0001740-2D Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 1.6e-52 210.3 458 50.4
LOC_Os08g39980 Oryza sativa ssp. japonica HOM04x5M002570 ORTHO04x5M002687 2.8e-52 209.5 572 58.4
TRITD7Av1G092980 Triticum turgidum HOM04x5M002570 ORTHO04x5M002687 2.8e-52 209.5 312 69.2
PH01000594G0730 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 8.4e-49 198.0 303 66.7
Sspon.06G0001740-1A Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 3.2e-48 196.1 481 46.4
Zm00008a003238 Zea mays PH207 HOM04x5M002570 ORTHO04x5M002687 3.2e-48 196.1 407 45.9
Zjn_sc00008.1.g09320.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002412 ORTHO04x5M002551 5.4e-48 195.3 431 47.1
Pgl_GLEAN_10002113 Cenchrus americanus HOM04x5M002570 ORTHO04x5M002687 1.2e-47 194.1 459 45.3
Bradi4g33820 Brachypodium distachyon HOM04x5M002570 ORTHO04x5M002687 2.3e-46 189.9 385 42.6
Sobic.002G248600 Sorghum bicolor HOM04x5M002570 ORTHO04x5M002687 4.3e-45 185.7 416 49.8
Zjn_sc00015.1.g05520.1.am.mk Zoysia japonica ssp. nagirizaki HOM04x5M002412 ORTHO04x5M002551 4.3e-45 185.7 711 38.0
Zm00001d020947 Zea mays B73 HOM04x5M002570 ORTHO04x5M002687 7.3e-45 184.9 412 37.4
Zm00007a00035265 Zea mays B104 HOM04x5M002570 ORTHO04x5M002687 7.3e-45 184.9 412 37.4
Zm00008a028437 Zea mays PH207 HOM04x5M002570 ORTHO04x5M002687 9.6e-45 184.5 412 38.1
HORVU5Hr1G073540 Hordeum vulgare HOM04x5M002570 ORTHO04x5M002687 3.6e-44 182.6 382 40.3
HORVU5Hr1G073580 Hordeum vulgare HOM04x5M002570 ORTHO04x5M002687 3.6e-44 182.6 382 40.3
TraesCS5D02G274400 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 8.1e-44 181.4 430 38.1
TraesCS5B02G266200 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 3.1e-43 179.5 431 38.7
TRITD5Bv1G149570 Triticum turgidum HOM04x5M002570 ORTHO04x5M002687 3.1e-43 179.5 431 38.7
PH01000150G0150 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 1.5e-42 177.2 287 61.7
p5.00_sc00131_p0015 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 2.0e-42 176.8 483 41.4
TraesCS5A02G266600 Triticum aestivum HOM04x5M002570 ORTHO04x5M002687 3.4e-42 176.0 432 37.3
TRITD7Bv1G067710 Triticum turgidum HOM04x5M002570 ORTHO04x5M002687 4.9e-41 172.2 125 77.6
Ma08_g26310 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 8.4e-41 171.4 400 40.2
Ma09_g18710 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 1.4e-40 170.6 467 33.0
Sspon.02G0037080-3D Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 1.9e-40 170.2 419 47.3
p5.00_sc00020_p0160 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 5.4e-40 168.7 450 33.8
p5.00_sc00096_p0028 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 1.6e-39 167.2 430 41.6
Seita.2G254700 Setaria italica HOM04x5M002570 ORTHO04x5M002687 2.1e-39 166.8 422 45.0
MisinT266000 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 1.3e-38 164.1 381 48.8
GSVIVG01001371001 Vitis vinifera HOM04x5M002570 ORTHO04x5M002687 1.7e-38 163.7 421 36.6
Ma09_g28270 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 2.3e-38 163.3 402 33.3
ASH_gene16039 Apostasia shenzhenica HOM04x5M002570 ORTHO04x5M002687 3.9e-38 162.5 477 37.5
p5.00_sc00037_p0129 Elaeis guineensis HOM04x5M002570 ORTHO04x5M002687 3.9e-38 162.5 496 41.5
Misin04G229900 Miscanthus sinensis HOM04x5M002570 ORTHO04x5M002687 3.9e-38 162.5 418 46.7
Ma09_g12020 Musa acuminata HOM04x5M002570 ORTHO04x5M002687 2.5e-37 159.8 447 43.6
CALSI_Maker00032927 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 3.3e-37 159.5 419 50.4
Sspon.02G0037080-2C Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 2.8e-36 156.4 376 48.1
OB08G26960 Oryza brachyantha HOM04x5M002570 ORTHO04x5M002687 4.8e-36 155.6 488 49.2
OsR498G0816445800.01 Oryza sativa ssp. indica HOM04x5M002570 ORTHO04x5M002687 1.8e-35 153.7 332 56.3
TRITD5Av1G160060 Triticum turgidum HOM04x5M002570 ORTHO04x5M002687 2.0e-34 150.2 434 34.8
CALSI_Maker00014448 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 2.6e-34 149.8 517 29.2
Sspon.02G0037080-1B Saccharum spontaneum HOM04x5M002570 ORTHO04x5M002687 1.4e-32 144.1 381 47.2
CALSI_Maker00038910 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 1.2e-31 141.0 443 36.1
OsR498G0917730800.01 Oryza sativa ssp. indica HOM04x5M002570 ORTHO04x5M002687 1.0e-30 137.9 429 44.1
Solyc01g073950.2 Solanum lycopersicum HOM04x5M002570 ORTHO04x5M002687 1.0e-30 137.9 454 30.0
PH01001573G0060 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 6.7e-30 135.2 433 31.6
Potri.001G229300 Populus trichocarpa HOM04x5M002570 ORTHO04x5M002687 7.4e-29 131.7 435 31.7
AT3G57980 Arabidopsis thaliana HOM04x5M002570 ORTHO04x5M002687 9.0e-27 124.8 462 29.4
PH01000770G0030 Phyllostachys edulis HOM04x5M002570 ORTHO04x5M002687 1.5e-26 124.0 259 38.2
AT2G44430 Arabidopsis thaliana HOM04x5M002570 ORTHO04x5M002687 2.0e-26 123.6 425 35.5
OB09G21390 Oryza brachyantha HOM04x5M002570 ORTHO04x5M002687 3.4e-26 122.9 161 50.9
LP030104 Lolium perenne HOM04x5M002570 ORTHO04x5M002687 9.9e-26 121.3 402 38.3
AT2G42150 Arabidopsis thaliana HOM04x5M002570 ORTHO04x5M002687 1.7e-25 120.6 427 29.7
LOC_Os09g31454 Oryza sativa ssp. japonica HOM04x5M002570 ORTHO04x5M002687 2.9e-25 119.8 376 44.4
AT3G60110 Arabidopsis thaliana HOM04x5M002570 ORTHO04x5M002687 7.1e-24 115.2 408 29.7
ATR0693G270 Amborella trichopoda HOM04x5M002570 ORTHO04x5M002687 2.7e-23 113.2 392 28.8
Potri.003G212500 Populus trichocarpa HOM04x5M002570 ORTHO04x5M002687 3.5e-23 112.8 472 39.2
PEQU_14986 Phalaenopsis equestris HOM04x5M002570 ORTHO04x5M002687 6.0e-23 112.1 400 33.0
Oropetium_20150105_05500 Oropetium thomaeum HOM04x5M002570 ORTHO04x5M002687 1.8e-22 110.5 152 52.0
Spipo0G0079200 Spirodela polyrhiza HOM04x5M002570 ORTHO04x5M002687 1.8e-22 110.5 134 50.0
Potri.001G013600 Populus trichocarpa HOM04x5M002570 ORTHO04x5M002687 5.1e-22 109.0 461 36.9
Aco000751 Ananas comosus HOM04x5M002570 ORTHO04x5M002687 1.3e-20 104.4 128 53.1
Spipo12G0037900 Spirodela polyrhiza HOM04x5M002570 ORTHO04x5M002687 2.8e-20 103.2 141 47.5
p5.00_sc00154_p0058 Elaeis guineensis HOM04x5M006888 ORTHO04x5M008419 4.0e-19 99.4 379 26.6
Pgl_GLEAN_10009993 Cenchrus americanus HOM04x5M002570 ORTHO04x5M002687 9.0e-19 98.2 148 45.3
CALSI_Maker00044427 Calamus simplicifolius HOM04x5M006888 ORTHO04x5M008419 2.2e-17 93.6 343 29.4
Potri.004G036900 Populus trichocarpa HOM04x5M006888 ORTHO04x5M008419 1.4e-16 90.9 391 26.6
LP000741 Lolium perenne HOM04x5M006888 ORTHO04x5M008419 2.5e-16 90.1 392 24.2
Zosma16g01780 Zostera marina HOM04x5M002570 ORTHO04x5M002687 2.5e-16 90.1 111 44.1
Bradi1g24580 Brachypodium distachyon HOM04x5M006888 ORTHO04x5M008419 1.6e-15 87.4 363 23.4
Spipo14G0058400 Spirodela polyrhiza HOM04x5M006888 ORTHO04x5M008419 1.6e-15 87.4 377 27.1
gene2213 Selaginella moellendorffii HOM04x5M002570 ORTHO04x5M002687 1.3e-14 84.3 136 37.5
Pp3c17_1160 Physcomitrium patens HOM04x5M002570 ORTHO04x5M002687 1.8e-14 84.0 148 37.2
Pp3c17_1175 Physcomitrium patens HOM04x5M002570 ORTHO04x5M002687 1.8e-14 84.0 148 37.2
PAB00018157 Picea abies HOM04x5M002570 ORTHO04x5M002687 3.9e-14 82.8 118 42.4
Solyc10g009160.2 Solanum lycopersicum HOM04x5M006888 ORTHO04x5M008419 3.9e-14 82.8 383 26.1
Zosma54g00430 Zostera marina HOM04x5M002570 ORTHO04x5M002687 5.1e-14 82.4 126 40.5
ATR0605G388 Amborella trichopoda HOM04x5M002570 ORTHO04x5M002687 6.7e-14 82.0 134 42.5
gene5260 Selaginella moellendorffii HOM04x5M002570 ORTHO04x5M002687 1.1e-13 81.3 136 36.8
Zm00007a00040219 Zea mays B104 HOM04x5M006888 ORTHO04x5M008419 1.5e-13 80.9 118 43.2
AT1G61215 Arabidopsis thaliana HOM04x5M006888 ORTHO04x5M008419 1.9e-13 80.5 379 23.5
Mapoly0032s0025 Marchantia polymorpha HOM04x5M002570 ORTHO04x5M002687 3.3e-13 79.7 133 33.1
Aco009146 Ananas comosus HOM04x5M006888 ORTHO04x5M008419 4.3e-13 79.3 370 31.4
OB07G24680 Oryza brachyantha HOM04x5M006888 ORTHO04x5M008419 1.3e-12 77.8 403 28.0
PH01003906G0090 Phyllostachys edulis HOM04x5M006888 ORTHO04x5M008419 1.3e-12 77.8 123 41.5
Solyc02g078810.2 Solanum lycopersicum HOM04x5M006888 ORTHO04x5M008419 8.2e-12 75.1 423 23.4
PAB00022580 Picea abies HOM04x5M002570 ORTHO04x5M002687 1.1e-11 74.7 108 38.9
PAB00062047 Picea abies HOM04x5M002570 ORTHO04x5M002687 1.1e-11 74.7 108 38.9
evm.TU.AsparagusV1_03.2223.V1.1 Asparagus officinalis HOM04x5M006888 ORTHO04x5M008419 2.4e-11 73.6 109 38.5
Misin03G324100 Miscanthus sinensis HOM04x5M006888 ORTHO04x5M008419 9.0e-11 71.6 110 40.9
MisinT311500 Miscanthus sinensis HOM04x5M006888 ORTHO04x5M008419 9.0e-11 71.6 110 40.9
Sobic.002G341100 Sorghum bicolor HOM04x5M006888 ORTHO04x5M008419 9.0e-11 71.6 110 40.9
Seita.2G354700 Setaria italica HOM04x5M006888 ORTHO04x5M008419 1.5e-10 70.9 109 41.3
TraesCS2A02G202700 Triticum aestivum HOM04x5M006888 ORTHO04x5M008419 1.5e-10 70.9 113 40.7
TraesCS2B02G229800 Triticum aestivum HOM04x5M006888 ORTHO04x5M008419 1.5e-10 70.9 113 40.7
TraesCS2D02G213000 Triticum aestivum HOM04x5M006888 ORTHO04x5M008419 1.5e-10 70.9 113 40.7
TRITD2Av1G074100 Triticum turgidum HOM04x5M006888 ORTHO04x5M008419 1.5e-10 70.9 113 40.7
TRITD2Bv1G083420 Triticum turgidum HOM04x5M006888 ORTHO04x5M008419 1.5e-10 70.9 113 40.7
Zm00001d006606 Zea mays B73 HOM04x5M006888 ORTHO04x5M000946 2.6e-10 70.1 110 40.9
Zm00007a00010553 Zea mays B104 HOM04x5M006888 ORTHO04x5M008419 2.6e-10 70.1 110 40.9
CALSI_Maker00044657 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 3.4e-10 69.7 63 55.6
Sspon.02G0005140-2B Saccharum spontaneum HOM04x5M006888 ORTHO04x5M008419 4.5e-10 69.3 110 40.0
Sspon.02G0005140-1A Saccharum spontaneum HOM04x5M006888 ORTHO04x5M008419 4.5e-10 69.3 110 40.0
p5.00_sc00259_p0022 Elaeis guineensis HOM04x5M006888 ORTHO04x5M008419 1.0e-09 68.2 109 38.5
p5.00_sc00259_p0021 Elaeis guineensis HOM04x5M006888 ORTHO04x5M008419 1.0e-09 68.2 109 38.5
evm.TU.AsparagusV1_05.3091.V1.1 Asparagus officinalis HOM04x5M010342 ORTHO04x5M002687 1.3e-09 67.8 158 36.7
Oropetium_20150105_20233 Oropetium thomaeum HOM04x5M002570 ORTHO04x5M002687 2.2e-09 67.0 237 43.0
CALSI_Maker00019150 Calamus simplicifolius HOM04x5M006888 ORTHO04x5M008419 2.9e-09 66.6 115 40.0
ATR0605G035 Amborella trichopoda HOM04x5M002570 ORTHO04x5M002687 5.0e-09 65.9 140 36.4
CALSI_Maker00014450 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 5.0e-09 65.9 129 37.2
Zm00008a029109 Zea mays PH207 HOM04x5M006888 ORTHO04x5M008419 1.9e-08 63.9 100 41.0
Potri.009G023100 Populus trichocarpa HOM04x5M002570 ORTHO04x5M002687 2.5e-08 63.5 154 33.1
Zjn_sc00001.1.g06600.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M006888 ORTHO04x5M008419 6.1e-07 58.9 60 48.3
Zm00001d021810 Zea mays B73 HOM04x5M000354 ORTHO04x5M008419 6.1e-07 58.9 132 35.6
Solyc01g006470.1 Solanum lycopersicum HOM04x5M002570 ORTHO04x5M002687 1.3e-06 57.8 140 29.3
Spipo0G0079100 Spirodela polyrhiza HOM04x5M002570 ORTHO04x5M002687 3.0e-06 56.6 112 33.9
Spipo12G0037800 Spirodela polyrhiza HOM04x5M002570 ORTHO04x5M002687 3.9e-06 56.2 90 42.2
Oropetium_20150105_14821 Oropetium thomaeum HOM04x5M002570 ORTHO04x5M002687 5.1e-06 55.8 81 48.1
Zjn_sc00008.1.g10910.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M006888 ORTHO04x5M008419 6.7e-06 55.5 60 46.7
CALSI_Maker00044662 Calamus simplicifolius HOM04x5M002570 ORTHO04x5M002687 8.7e-06 55.1 125 37.6

Amborella trichopoda (3 genes)
Ananas comosus (2 genes)
Apostasia shenzhenica (1 genes)
Arabidopsis thaliana (5 genes)
Asparagus officinalis (2 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (8 genes)
Cenchrus americanus (2 genes)
Chlamydomonas reinhardtii (0 genes)
Elaeis guineensis (7 genes)
Hordeum vulgare (3 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (1 genes)
Micromonas commoda (0 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (4 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (2 genes)
Oryza sativa ssp. japonica (2 genes)
Phalaenopsis equestris (1 genes)
Phyllostachys edulis (5 genes)
Physcomitrium patens (2 genes)
Picea abies (3 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (7 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (3 genes)
Solanum lycopersicum (4 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (5 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (1 genes)
Zea mays B73 (4 genes)
Zea mays B104 (4 genes)
Zea mays PH207 (3 genes)
Zostera marina (2 genes)
Zoysia japonica ssp. nagirizaki (4 genes)

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