Interactive Phylogenetics Module

Gene Id
AT3G48860

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT3G48860 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 2.4e-231 804.3 578 100.0
AT5G23700 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 2.7e-145 518.5 581 68.8
Solyc03g118390.2 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 1.7e-123 446.0 581 52.2
GSVIVG01008631001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 1.9e-119 432.6 577 64.5
GSVIVG01004935001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 4.4e-116 421.4 578 59.0
ASH_gene19761 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M001589 1.0e-112 410.2 584 59.8
Potri.015G104600 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 8.7e-112 407.1 589 60.4
Potri.012G105400 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 1.7e-107 392.9 437 68.9
Potri.003G164100 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 4.6e-105 384.8 567 60.3
p5.00_sc00057_p0063 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 2.6e-100 369.0 575 58.8
Potri.001G065800 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 2.6e-100 369.0 569 61.7
Ma09_g01020 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 3.7e-94 348.6 580 51.2
Aco015077 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 1.3e-91 340.1 453 62.3
p5.00_sc01766_p0001 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 2.9e-91 339.0 459 61.4
ATR0582G200 Amborella trichopoda HOM04x5M001523 ORTHO04x5M001589 3.8e-91 338.6 461 64.2
PEQU_08641 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 1.9e-90 336.3 276 64.1
ATR0706G100 Amborella trichopoda HOM04x5M001523 ORTHO04x5M001589 5.5e-90 334.7 565 53.6
PEQU_07858 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 7.1e-90 334.3 281 64.1
Ma04_g00060 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 1.8e-88 329.7 575 54.8
CALSI_Maker00037144 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 2.0e-84 316.2 648 52.3
LOC_Os01g70320 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 2.9e-83 312.4 456 59.6
Seita.8G134100 Setaria italica HOM04x5M001523 ORTHO04x5M001589 2.9e-83 312.4 285 56.8
CALSI_Maker00018832 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 1.1e-82 310.5 658 48.3
Zosma69g00810 Zostera marina HOM04x5M001523 ORTHO04x5M001589 3.2e-82 308.9 568 45.1
TraesCS3B02G476100 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 5.5e-82 308.1 453 58.7
OB01G51640 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 1.2e-81 307.0 461 58.8
Spipo4G0061800 Spirodela polyrhiza HOM04x5M001523 ORTHO04x5M001589 1.2e-81 307.0 252 64.3
OB11G21770 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 2.1e-81 306.2 274 56.6
Misin10G109400 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 2.7e-81 305.8 285 55.8
TRITD3Bv1G242080 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 3.6e-81 305.4 457 57.8
AT4G25070 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 7.9e-81 304.3 251 62.2
Oropetium_20150105_21536 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 1.4e-80 303.5 273 57.5
CALSI_Maker00016663 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 3.9e-80 302.0 456 58.1
Misin09G134700 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 3.9e-80 302.0 285 55.1
Sobic.005G129400 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 6.7e-80 301.2 285 54.7
Sobic.003G412300 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 1.5e-79 300.1 229 65.5
Bradi4g17917 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 2.0e-79 299.7 285 54.7
TraesCS4B02G122700 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 3.3e-79 298.9 285 55.1
TRITD4Bv1G050480 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 3.3e-79 298.9 285 55.1
Misin06G371400 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 4.3e-79 298.5 230 64.8
TraesCS4A02G192600 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 5.7e-79 298.1 285 55.1
TRITD4Av1G154160 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 5.7e-79 298.1 285 55.1
TraesCS4D02G120700 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 1.3e-78 297.0 285 54.7
LP009590 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 1.7e-78 296.6 236 63.6
LOC_Os11g31950 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 1.7e-78 296.6 271 56.1
Bradi2g59510 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 2.8e-78 295.8 233 63.9
HORVU4Hr1G023390 Hordeum vulgare HOM04x5M001523 ORTHO04x5M001589 4.8e-78 295.0 285 54.0
Aco006674 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 6.3e-78 294.7 271 59.4
LP038183 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 6.3e-78 294.7 274 55.5
AT5G13260 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 3.1e-77 292.4 448 56.9
Seita.5G438400 Setaria italica HOM04x5M001523 ORTHO04x5M001589 9.1e-77 290.8 229 64.6
Zosma27g00300 Zostera marina HOM04x5M001523 ORTHO04x5M001589 9.1e-77 290.8 234 65.8
TraesCS3D02G435000 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 4.5e-76 288.5 452 57.5
TraesCS3A02G442300 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 7.7e-76 287.7 457 56.7
TRITD3Av1G250250 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 7.7e-76 287.7 457 56.7
Misin05G403900 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 1.7e-75 286.6 438 58.2
HORVU3Hr1G096450 Hordeum vulgare HOM04x5M001523 ORTHO04x5M001589 1.4e-74 283.5 452 56.9
Zm00001d049273 Zea mays B73 HOM04x5M001523 ORTHO04x5M001589 1.4e-74 283.5 285 53.0
Aco027227 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 4.2e-74 282.0 298 53.4
Oropetium_20150105_09846 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 7.9e-73 277.7 237 61.2
Aco007293 Ananas comosus HOM04x5M001523 ORTHO04x5M001589 1.8e-72 276.6 472 40.3
Sspon.03G0027700-2C Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 6.7e-72 274.6 446 56.7
gene4642 Selaginella moellendorffii HOM04x5M001523 ORTHO04x5M001589 2.0e-71 273.1 238 59.7
gene16812 Selaginella moellendorffii HOM04x5M001523 ORTHO04x5M001589 4.4e-71 271.9 238 59.2
Spipo7G0049800 Spirodela polyrhiza HOM04x5M001523 ORTHO04x5M001589 4.4e-71 271.9 253 60.5
evm.TU.AsparagusV1_02.2052.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 9.7e-71 270.8 446 40.8
AT4G08630 Arabidopsis thaliana HOM04x5M001523 ORTHO04x5M001589 1.7e-70 270.0 281 49.8
Pp3c19_9680 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 2.8e-70 269.2 249 59.4
Potri.005G044600 Populus trichocarpa HOM04x5M001523 ORTHO04x5M001589 8.2e-70 267.7 247 57.9
Sspon.06G0014630-1A Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.8e-69 266.5 240 57.1
Pp3c22_21290 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 2.4e-69 266.2 248 58.9
Pp3c22_21255 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 2.4e-69 266.2 248 58.9
Zm00007a00011305 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 5.3e-69 265.0 285 51.9
Sspon.03G0027700-1P Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 9.1e-69 264.2 439 56.5
Sspon.06G0014630-3C Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 7.7e-68 261.2 228 58.3
Pgl_GLEAN_10004734 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 3.2e-66 255.8 276 50.7
Pp3c19_10380 Physcomitrium patens HOM04x5M001523 ORTHO04x5M001589 4.2e-66 255.4 277 51.3
Sspon.06G0014630-2B Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 7.2e-66 254.6 336 44.3
Bradi2g36005 Brachypodium distachyon HOM04x5M001523 ORTHO04x5M001589 4.7e-65 251.9 280 50.0
LP007813 Lolium perenne HOM04x5M001523 ORTHO04x5M001589 8.0e-65 251.1 270 50.7
Seita.3G038900 Setaria italica HOM04x5M001523 ORTHO04x5M001589 2.6e-63 246.1 287 48.8
Sspon.07G0013220-2B Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 7.4e-63 244.6 275 49.5
TraesCS1A02G102200 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 1.7e-62 243.4 270 50.7
TRITD1Av1G041990 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 1.7e-62 243.4 270 50.7
Sspon.06G0014630-4D Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 4.8e-62 241.9 237 55.7
Sspon.07G0013220-1T Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 8.2e-62 241.1 279 47.3
TraesCS1B02G112600 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 1.8e-61 240.0 270 50.4
TRITD1Bv1G044830 Triticum turgidum HOM04x5M001523 ORTHO04x5M001589 1.8e-61 240.0 270 50.4
Misin17G049700 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 2.4e-61 239.6 275 48.7
Mapoly0101s0059 Marchantia polymorpha HOM04x5M001523 ORTHO04x5M001589 3.1e-61 239.2 237 54.9
TraesCS1D02G093800 Triticum aestivum HOM04x5M001523 ORTHO04x5M001589 9.1e-61 237.7 270 50.0
Misin16G054100 Miscanthus sinensis HOM04x5M001523 ORTHO04x5M001589 1.2e-60 237.3 279 46.6
Ma02_g03510 Musa acuminata HOM04x5M001523 ORTHO04x5M001589 3.5e-60 235.7 604 49.2
Sobic.009G042800 Sorghum bicolor HOM04x5M001523 ORTHO04x5M001589 2.9e-59 232.6 289 46.4
PH01000002G3240 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 2.0e-55 219.9 230 53.0
Oropetium_20150105_15532 Oropetium thomaeum HOM04x5M001523 ORTHO04x5M001589 2.2e-54 216.5 270 48.9
Zjn_sc00009.1.g01850.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 1.2e-52 210.7 235 49.4
Solyc05g023770.2 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 1.6e-52 210.3 417 58.8
Zm00007a00006561 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 2.0e-52 209.9 252 48.0
PAB00042674 Picea abies HOM04x5M001523 ORTHO04x5M001589 2.9e-51 206.1 180 64.4
Zm00008a012853 Zea mays PH207 HOM04x5M001523 ORTHO04x5M001589 3.8e-51 205.7 245 48.6
Zm00007a00002495 Zea mays B104 HOM04x5M001523 ORTHO04x5M001589 5.0e-51 205.3 228 50.9
LOC_Os05g05580 Oryza sativa ssp. japonica HOM04x5M001523 ORTHO04x5M001589 8.5e-51 204.5 284 42.6
Zm00008a037492 Zea mays PH207 HOM04x5M001523 ORTHO04x5M001589 6.1e-49 198.4 259 45.9
Sspon.07G0013220-1A Saccharum spontaneum HOM04x5M001523 ORTHO04x5M001589 1.0e-48 197.6 280 43.9
OB05G13160 Oryza brachyantha HOM04x5M001523 ORTHO04x5M001589 4.0e-48 195.7 281 43.4
Pgl_GLEAN_10000952 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 9.8e-47 191.0 179 53.6
GSVIVG01021962001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 1.1e-45 187.6 215 52.1
OsR498G1120235900.01 Oryza sativa ssp. indica HOM04x5M001523 ORTHO04x5M001589 2.4e-45 186.4 189 51.9
CALSI_Maker00048189 Calamus simplicifolius HOM04x5M001523 ORTHO04x5M001589 5.0e-43 178.7 229 45.9
evm.TU.AsparagusV1_04.1549.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 1.0e-40 171.0 147 61.9
Mapoly0013s0021 Marchantia polymorpha HOM04x5M001523 ORTHO04x5M001589 5.7e-39 165.2 231 43.3
Zosma5g01040 Zostera marina HOM04x5M001523 ORTHO04x5M001589 9.8e-39 164.5 218 40.8
Zm00001d042262 Zea mays B73 HOM04x5M000360 ORTHO04x5M000256 1.2e-36 157.5 259 39.4
evm.TU.AsparagusV1_09.1475.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 1.6e-36 157.1 127 63.0
p5.00_sc00211_p0001 Elaeis guineensis HOM04x5M001523 ORTHO04x5M001589 1.1e-34 151.0 213 44.6
PEQU_04259 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 9.5e-34 147.9 155 54.2
Solyc10g037930.1 Solanum lycopersicum HOM04x5M001523 ORTHO04x5M001589 6.4e-30 135.2 128 56.2
Zjn_sc00034.1.g02320.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 6.4e-30 135.2 141 53.2
Pgl_GLEAN_10000785 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 1.1e-29 134.4 153 47.1
Pgl_GLEAN_10003497 Cenchrus americanus HOM04x5M001523 ORTHO04x5M001589 2.5e-26 123.2 155 48.4
evm.TU.AsparagusV1_Unassigned.393.V1.1 Asparagus officinalis HOM04x5M001523 ORTHO04x5M001589 4.7e-25 119.0 73 76.7
Zjn_sc00186.1.g00130.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM04x5M001523 ORTHO04x5M001589 4.7e-25 119.0 84 66.7
OsR498G0509736400.01 Oryza sativa ssp. indica HOM04x5M001523 ORTHO04x5M001589 8.9e-24 114.8 116 52.6
GSVIVG01021965001 Vitis vinifera HOM04x5M001523 ORTHO04x5M001589 8.6e-19 98.2 76 65.8
PH01002160G0270 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 1.1e-16 91.3 105 50.5
MCO12G428 Micromonas commoda HOM04x5M001523 ORTHO04x5M001589 2.0e-15 87.0 302 26.2
ASH_gene8524 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M001589 9.9e-15 84.7 76 55.3
PH01002160G0250 Phyllostachys edulis HOM04x5M001523 ORTHO04x5M001589 2.9e-14 83.2 60 60.0
ASH_gene8570 Apostasia shenzhenica HOM04x5M001523 ORTHO04x5M001589 1.1e-13 81.3 99 48.5
Cre03.g161578 Chlamydomonas reinhardtii HOM04x5M001523 ORTHO04x5M001589 1.9e-13 80.5 296 26.4
Aco021763 Ananas comosus HOM04x5M001523 ORTHO04x5M009652 9.2e-13 78.2 78 51.3
PAB00006093 Picea abies HOM04x5M001523 ORTHO04x5M001589 4.6e-12 75.9 59 62.7
OsR498G0102629600.01 Oryza sativa ssp. indica HOM04x5M001523 ORTHO04x5M001589 2.5e-10 70.1 246 58.1
Aco028088 Ananas comosus HOM04x5M000382 ORTHO04x5M000270 8.1e-09 65.1 82 40.2
PAB00048619 Picea abies HOM04x5M001523 ORTHO04x5M001589 8.1e-09 65.1 109 41.3
PEQU_07861 Phalaenopsis equestris HOM04x5M001523 ORTHO04x5M001589 9.9e-07 58.2 176 41.5

Amborella trichopoda (2 genes)
Ananas comosus (6 genes)
Apostasia shenzhenica (3 genes)
Arabidopsis thaliana (5 genes)
Asparagus officinalis (4 genes)
Brachypodium distachyon (3 genes)
Calamus simplicifolius (4 genes)
Cenchrus americanus (4 genes)
Chlamydomonas reinhardtii (1 genes)
Elaeis guineensis (3 genes)
Hordeum vulgare (2 genes)
Lolium perenne (3 genes)
Marchantia polymorpha (2 genes)
Micromonas commoda (1 genes)
Miscanthus sinensis (6 genes)
Musa acuminata (3 genes)
Oropetium thomaeum (3 genes)
Oryza brachyantha (3 genes)
Oryza sativa ssp. indica (3 genes)
Oryza sativa ssp. japonica (3 genes)
Phalaenopsis equestris (4 genes)
Phyllostachys edulis (3 genes)
Physcomitrium patens (4 genes)
Picea abies (3 genes)
Populus trichocarpa (5 genes)
Saccharum spontaneum (9 genes)
Selaginella moellendorffii (2 genes)
Setaria italica (3 genes)
Solanum lycopersicum (3 genes)
Sorghum bicolor (3 genes)
Spirodela polyrhiza (2 genes)
Triticum aestivum (9 genes)
Triticum turgidum (6 genes)
Vitis vinifera (4 genes)
Zea mays B73 (2 genes)
Zea mays B104 (3 genes)
Zea mays PH207 (2 genes)
Zostera marina (3 genes)
Zoysia japonica ssp. nagirizaki (3 genes)

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