Pico-PLAZA 3.0 : Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Email Address (optional)

Genes

Gene ID	Organism	E-value	Bitscore	Alignment Length	Identity Percentage
AT3G20420	Arabidopsis thaliana	0.0	798	392	100.00
OS05G18850	Oryza sativa	1e-83	265	317	46.37
AT5G45150	Arabidopsis thaliana	2e-79	268	389	44.22
ATR_00007G02860	Amborella trichopoda	4e-65	218	235	46.81
ATR_00007G02840	Amborella trichopoda	9e-60	208	295	40.00
OS06G25250	Oryza sativa	3e-51	179	264	40.15
OS03G02970	Oryza sativa	2e-47	180	338	32.54
PP00030G01470	Physcomitrella patens	2e-45	174	342	32.46
ATR_00018G00030	Amborella trichopoda	2e-44	171	334	33.23
AT4G15417	Arabidopsis thaliana	1e-43	158	245	39.18
AT1G01040	Arabidopsis thaliana	1e-42	166	349	32.66
AT3G43920	Arabidopsis thaliana	2e-33	137	315	31.43
PP00082G00590	Physcomitrella patens	1e-32	135	226	37.17
PP00149G00220	Physcomitrella patens	2e-32	135	241	35.68
AC00G50450	Asterochloris sp. Cgr-DA1pho v2.0	6e-32	124	189	39.15
ATR_00007G02850	Amborella trichopoda	1e-31	123	159	42.77
OS10G34430	Oryza sativa	3e-31	131	398	26.88
ATR_00026G00150	Amborella trichopoda	2e-29	125	253	33.20
OS01G68120	Oryza sativa	2e-29	125	243	33.33
PP00196G00310	Physcomitrella patens	2e-28	119	266	28.57
OS01G37050	Oryza sativa	1e-26	111	218	35.78
ATR_00033G00650	Amborella trichopoda	1e-26	117	249	32.93
AT5G20320	Arabidopsis thaliana	8e-25	111	204	32.35
OS03G38740	Oryza sativa	3e-24	109	246	31.71
OS04G43050	Oryza sativa	7e-24	108	242	30.99
ATR_00016G03530	Amborella trichopoda	8e-24	108	186	36.56
OS09G14610	Oryza sativa	4e-23	105	246	31.71
FBgn0039016	Drosophila melanogaster	2e-22	104	302	28.15
AT3G03300	Arabidopsis thaliana	2e-22	103	255	31.76
ccr166220	Chondrus crispus	4e-22	103	175	34.86
ATR_00014G00050	Amborella trichopoda	8e-21	91.7	105	49.52
ENSMUSG00000041415	Mus musculus	2e-20	97.8	257	28.40
ENSG00000100697	Homo sapiens	5e-20	96.7	257	28.40
FBgn0034246	Drosophila melanogaster	2e-17	88.2	291	28.52
ccr82040	Chondrus crispus	3e-17	87.8	244	28.69
FC009G06240	Fragilariopsis cylindrus	8e-16	83.6	162	36.42
AP00G48790	Auxenochlorella protothecoides	3e-14	78.6	147	29.93
WBGene00000939	Caenorhabditis elegans	1e-13	76.6	266	24.81
gsu13350	Galdieria sulphuraria	9e-13	73.9	300	26.67
SPCC188.13c	Schizosaccharomyces pombe	6e-11	68.6	157	24.20
phs343350	Phytophtora sojae	6e-11	68.2	133	35.34
PI00G01220	Picochlorum sp. SENEW3 (SE3)	1e-10	67.0	235	25.96
RCC4223.19g01050	Picochlorum_RCC4223	4e-10	65.1	231	25.97
ES0039G00700	Ectocarpus siliculosus	6e-10	65.5	161	30.43
Naga_100010g67	Nannochloropsis gaditana	1e-09	64.3	191	27.23
CV00G61060	Coccomyxa subellipsoidea C-169	2e-09	63.2	167	28.14
PI00G52110	Picochlorum sp. SENEW3 (SE3)	2e-09	61.2	165	31.52
pte363500	Paramecium tetraurelia	3e-09	62.8	180	31.67
ES0082G00240	Ectocarpus siliculosus	3e-08	59.7	162	30.25
RCC4223.08g01230	Picochlorum_RCC4223	3e-08	57.8	139	30.94
CV00G06860	Coccomyxa subellipsoidea C-169	3e-08	57.4	152	27.63
CNC64A_018G02590	Chlorella sp NC64A	8e-08	58.5	203	29.06
phs260450	Phytophtora sojae	9e-08	57.4	192	29.69
SPBC119.11c	Schizosaccharomyces pombe	1e-07	57.4	220	30.00
FBgn0026722	Drosophila melanogaster	3e-07	56.6	259	24.71
CM19G02190	Cyanidioschyzon merolae	8e-07	55.1	150	28.00
pte730470	Paramecium tetraurelia	1e-06	54.7	266	20.30
WBGene00009163	Caenorhabditis elegans	2e-06	53.9	166	26.51
ENSG00000113360	Homo sapiens	2e-06	53.9	264	23.11
ENSMUSG00000022191	Mus musculus	3e-06	53.9	264	23.11
VC00G126830	Volvox carteri	3e-06	53.5	151	27.15

External Sequences (optional)

External Sequences Type

Program Settings

MSA algorithm
Tree construction algorithm
Edit MSA alignment