Functional clusters

Information

  • Type Gene Ontology
  • Description cellular lipid metabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Magnolia biondii Chr04 3 CH_mbi_439 12 73 0.0000793039
Rosa chinensis RcHm_v2.0_Chr7 3 CH_rch_429 12 60 0.0000113257
Magnolia biondii Chr04 4 CH_mbi_439 12 73 0.0000793039
Rosa chinensis RcHm_v2.0_Chr7 4 CH_rch_429 12 60 0.0000113257

Available child term results

Ontology identifier Description Number of clusters
GO:0001561 fatty acid alpha-oxidation 42
GO:0001676 long-chain fatty acid metabolic process 2
GO:0006488 dolichol-linked oligosaccharide biosynthetic process 4
GO:0006506 GPI anchor biosynthetic process 14
GO:0006631 fatty acid metabolic process 8
GO:0006633 fatty acid biosynthetic process 46
GO:0006635 fatty acid beta-oxidation 6
GO:0006636 unsaturated fatty acid biosynthetic process 8
GO:0006639 acylglycerol metabolic process 2
GO:0006642 triglyceride mobilization 2
GO:0006644 phospholipid metabolic process 2
GO:0006651 diacylglycerol biosynthetic process 26
GO:0006654 phosphatidic acid biosynthetic process 4
GO:0006656 phosphatidylcholine biosynthetic process 2
GO:0006661 phosphatidylinositol biosynthetic process 2
GO:0006666 3-keto-sphinganine metabolic process 2
GO:0006671 phytosphingosine metabolic process 4
GO:0006679 glucosylceramide biosynthetic process 2
GO:0006680 glucosylceramide catabolic process 10
GO:0006721 terpenoid metabolic process 18
GO:0006722 triterpenoid metabolic process 22
GO:0008299 isoprenoid biosynthetic process 26
GO:0008654 phospholipid biosynthetic process 4
GO:0009686 gibberellin biosynthetic process 2
GO:0010028 xanthophyll cycle 2
GO:0010115 regulation of abscisic acid biosynthetic process 12
GO:0010116 positive regulation of abscisic acid biosynthetic process 6
GO:0010142 farnesyl diphosphate biosynthetic process, mevalonate pathway 12
GO:0010241 ent-kaurene oxidation to kaurenoic acid 34
GO:0010371 regulation of gibberellin biosynthetic process 32
GO:0010372 positive regulation of gibberellin biosynthetic process 2
GO:0010430 fatty acid omega-oxidation 4
GO:0010513 positive regulation of phosphatidylinositol biosynthetic process 2
GO:0010597 green leaf volatile biosynthetic process 8
GO:0010683 tricyclic triterpenoid metabolic process 2
GO:0010896 regulation of triglyceride catabolic process 8
GO:0016024 CDP-diacylglycerol biosynthetic process 2
GO:0016093 polyprenol metabolic process 4
GO:0016094 polyprenol biosynthetic process 4
GO:0016099 monoterpenoid biosynthetic process 12
GO:0016101 diterpenoid metabolic process 32
GO:0016102 diterpenoid biosynthetic process 82
GO:0016104 triterpenoid biosynthetic process 6
GO:0016106 sesquiterpenoid biosynthetic process 6
GO:0016114 terpenoid biosynthetic process 6
GO:0016121 carotene catabolic process 4
GO:0016122 xanthophyll metabolic process 2
GO:0016123 xanthophyll biosynthetic process 2
GO:0016124 xanthophyll catabolic process 12
GO:0016255 attachment of GPI anchor to protein 14
GO:0019374 galactolipid metabolic process 2
GO:0019408 dolichol biosynthetic process 18
GO:0019432 triglyceride biosynthetic process 2
GO:0019433 triglyceride catabolic process 10
GO:0019605 butyrate metabolic process 2
GO:0019742 pentacyclic triterpenoid metabolic process 12
GO:0019745 pentacyclic triterpenoid biosynthetic process 6
GO:0030497 fatty acid elongation 6
GO:0031998 regulation of fatty acid beta-oxidation 2
GO:0032049 cardiolipin biosynthetic process 8
GO:0033306 phytol metabolic process 74
GO:0033539 fatty acid beta-oxidation using acyl-CoA dehydrogenase 2
GO:0033542 fatty acid beta-oxidation, unsaturated, even number 8
GO:0034434 sterol esterification 108
GO:0036092 phosphatidylinositol-3-phosphate biosynthetic process 4
GO:0042214 terpene metabolic process 2
GO:0042758 long-chain fatty acid catabolic process 2
GO:0042759 long-chain fatty acid biosynthetic process 8
GO:0042760 very long-chain fatty acid catabolic process 2
GO:0042761 very long-chain fatty acid biosynthetic process 2
GO:0043692 monoterpene metabolic process 2
GO:0043693 monoterpene biosynthetic process 4
GO:0044242 cellular lipid catabolic process 2
GO:0045017 glycerolipid biosynthetic process 2
GO:0045337 farnesyl diphosphate biosynthetic process 2
GO:0045338 farnesyl diphosphate metabolic process 6
GO:0045339 farnesyl diphosphate catabolic process 14
GO:0045723 positive regulation of fatty acid biosynthetic process 6
GO:0046337 phosphatidylethanolamine metabolic process 2
GO:0046340 diacylglycerol catabolic process 8
GO:0046345 abscisic acid catabolic process 16
GO:0046459 short-chain fatty acid metabolic process 2
GO:0046466 membrane lipid catabolic process 4
GO:0046470 phosphatidylcholine metabolic process 2
GO:0046473 phosphatidic acid metabolic process 4
GO:0046488 phosphatidylinositol metabolic process 2
GO:0046512 sphingosine biosynthetic process 16
GO:0046514 ceramide catabolic process 6
GO:0046520 sphingoid biosynthetic process 18
GO:0046854 phosphatidylinositol phosphate biosynthetic process 2
GO:0046856 phosphatidylinositol dephosphorylation 8
GO:0051502 diterpene phytoalexin biosynthetic process 16
GO:0051762 sesquiterpene biosynthetic process 14
GO:0051791 medium-chain fatty acid metabolic process 6
GO:0052889 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene 4
GO:0080003 thalianol metabolic process 6
GO:0080065 4-alpha-methyl-delta7-sterol oxidation 4
GO:0080141 regulation of jasmonic acid biosynthetic process 2
GO:0090153 regulation of sphingolipid biosynthetic process 2
GO:0090359 negative regulation of abscisic acid biosynthetic process 4
GO:1900486 positive regulation of isopentenyl diphosphate biosynthetic process, mevalonate pathway 8
GO:1901601 strigolactone biosynthetic process 10
GO:1901811 beta-carotene catabolic process 10
GO:1901937 beta-caryophyllene biosynthetic process 4
GO:1902609 (R)-2-hydroxy-alpha-linolenic acid biosynthetic process 2
GO:1903730 regulation of phosphatidate phosphatase activity 6
GO:1904143 positive regulation of carotenoid biosynthetic process 4
GO:1904964 positive regulation of phytol biosynthetic process 12
GO:1905038 regulation of membrane lipid metabolic process 2
GO:2001280 positive regulation of unsaturated fatty acid biosynthetic process 2

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001