Functional clusters
Information
- Type Gene Ontology
- Description phytol metabolic process
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Actinidia chinensis | Lachesis_group11 | 3 | CH_ach_204 | 2 | 2 | 0.000325928 |
Aquilegia oxysepala | CHR06 | 3 | CH_aox_307 | 2 | 2 | 0.000801989 |
Amborella trichopoda | AmTr_v1.0_scaffold00057 | 3 | CH_atr_318 | 2 | 3 | 0.000714919 |
Brassica carinata | ChrB07 | 3 | CH_bca_228 | 3 | 3 | 0.000000113097 |
Brassica napus | C02 | 3 | CH_bna_275 | 3 | 6 | 0.00000295544 |
Brassica napus | A02 | 3 | CH_bna_86 | 4 | 5 | 0.0000000000685846 |
Brassica oleracea | C2 | 3 | CH_bol_137 | 3 | 5 | 0.000000320486 |
Brassica rapa | A02 | 3 | CH_bra_261 | 2 | 2 | 0.000429314 |
Beta vulgaris | Chr4_EL10_PGA_scaffold1 | 3 | CH_bvu_240 | 2 | 2 | 0.00049675 |
Chenopodium quinoa | C_Quinoa_Scaffold_1000 | 3 | CH_cqu_203 | 3 | 4 | 0.00000113139 |
Capsella rubella | scaffold_5 | 3 | CH_cru_116 | 3 | 3 | 0.000000080191 |
Durio zibethinus | NW_019168470.1 | 3 | CH_dzi_305 | 2 | 2 | 0.000463489 |
Erigeron canadensis | Conyza_canadensis_scaffold:2 | 3 | CH_eca_465 | 2 | 3 | 0.000807658 |
Eucalyptus grandis | Chr09 | 3 | CH_egr_186 | 7 | 29 | 0.00000000000000844713 |
Eucalyptus grandis | Chr08 | 3 | CH_egr_236 | 5 | 7 | 0.00000000000237782 |
Eutrema salsugineum | scaffold_6 | 3 | CH_esa_240 | 2 | 2 | 0.000456899 |
Glycine max | Gm16 | 3 | CH_gma_525 | 2 | 2 | 0.00079707 |
Helianthus annuus | HanXRQChr15 | 3 | CH_han_681 | 2 | 2 | 0.000579643 |
Hydrangea macrophylla | Hma1.2p1_0332F.1 | 3 | CH_hma_80 | 3 | 3 | 0.000000647896 |
Lotus japonicus | chr1 | 3 | CH_lja_113 | 3 | 4 | 0.000000306785 |
Lonicera japonica | GWHAAZE00000007 | 3 | CH_lonja_598 | 2 | 2 | 0.000898311 |
Lactuca sativa | Lsat_1_v8_lg_2 | 3 | CH_lsa_429 | 2 | 2 | 0.000308404 |
Manihot esculenta | Chromosome09 | 3 | CH_mes_164 | 3 | 3 | 0.000000111865 |
Medicago truncatula | chr7 | 3 | CH_mtr_314 | 3 | 5 | 0.000000253192 |
Punica granatum | NC_045128.1 | 3 | CH_pgr_190 | 3 | 5 | 0.00000295516 |
Punica granatum | NC_045131.1 | 3 | CH_pgr_201 | 3 | 6 | 0.00000590943 |
Pisum sativum | chr3LG5 | 3 | CH_psa_115 | 3 | 5 | 0.000000408112 |
Populus trichocarpa | Chr13 | 3 | CH_ptr_140 | 4 | 5 | 0.00000000289892 |
Populus trichocarpa | Chr01 | 3 | CH_ptr_156 | 4 | 6 | 0.0000000086945 |
Populus trichocarpa | Chr05 | 3 | CH_ptr_246 | 3 | 3 | 0.00000182416 |
Phaseolus vulgaris | Chr01 | 3 | CH_pvu_331 | 2 | 2 | 0.000440836 |
Quercus lobata | 3 | 3 | CH_qlo_456 | 3 | 3 | 0.000000223911 |
Salvia bowleyana | GWHASIU00000008 | 3 | CH_sbo_202 | 4 | 27 | 0.000000346376 |
Selenicereus undatus | Scaffold_33679 | 3 | CH_sun_161 | 2 | 2 | 0.000217992 |
Theobroma cacao | Chromosome_4 | 3 | CH_tca_141 | 3 | 3 | 0.0000000804614 |
Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 3 | CH_vma_349 | 2 | 2 | 0.000557543 |
Vitis vinifera | chr14 | 3 | CH_vvi_378 | 2 | 2 | 0.000456378 |
Actinidia chinensis | Lachesis_group11 | 4 | CH_ach_204 | 2 | 2 | 0.000325928 |
Aquilegia oxysepala | CHR06 | 4 | CH_aox_307 | 2 | 2 | 0.000801989 |
Amborella trichopoda | AmTr_v1.0_scaffold00057 | 4 | CH_atr_318 | 2 | 3 | 0.000714919 |
Brassica carinata | ChrB07 | 4 | CH_bca_228 | 3 | 3 | 0.000000113097 |
Brassica napus | C02 | 4 | CH_bna_275 | 3 | 6 | 0.00000295544 |
Brassica napus | A02 | 4 | CH_bna_86 | 4 | 5 | 0.0000000000685846 |
Brassica oleracea | C2 | 4 | CH_bol_137 | 3 | 5 | 0.000000320486 |
Brassica rapa | A02 | 4 | CH_bra_261 | 2 | 2 | 0.000429314 |
Beta vulgaris | Chr4_EL10_PGA_scaffold1 | 4 | CH_bvu_240 | 2 | 2 | 0.00049675 |
Chenopodium quinoa | C_Quinoa_Scaffold_1000 | 4 | CH_cqu_203 | 3 | 4 | 0.00000113139 |
Capsella rubella | scaffold_5 | 4 | CH_cru_116 | 3 | 3 | 0.000000080191 |
Durio zibethinus | NW_019168470.1 | 4 | CH_dzi_305 | 2 | 2 | 0.000463489 |
Erigeron canadensis | Conyza_canadensis_scaffold:2 | 4 | CH_eca_465 | 2 | 3 | 0.000807658 |
Eucalyptus grandis | Chr09 | 4 | CH_egr_186 | 7 | 29 | 0.00000000000000844713 |
Eucalyptus grandis | Chr08 | 4 | CH_egr_236 | 5 | 7 | 0.00000000000237782 |
Eutrema salsugineum | scaffold_6 | 4 | CH_esa_240 | 2 | 2 | 0.000456899 |
Glycine max | Gm16 | 4 | CH_gma_525 | 2 | 2 | 0.00079707 |
Helianthus annuus | HanXRQChr15 | 4 | CH_han_681 | 2 | 2 | 0.000579643 |
Hydrangea macrophylla | Hma1.2p1_0332F.1 | 4 | CH_hma_80 | 3 | 3 | 0.000000647896 |
Lotus japonicus | chr1 | 4 | CH_lja_113 | 3 | 4 | 0.000000306785 |
Lonicera japonica | GWHAAZE00000007 | 4 | CH_lonja_598 | 2 | 2 | 0.000898311 |
Lactuca sativa | Lsat_1_v8_lg_2 | 4 | CH_lsa_429 | 2 | 2 | 0.000308404 |
Manihot esculenta | Chromosome09 | 4 | CH_mes_164 | 3 | 3 | 0.000000111865 |
Medicago truncatula | chr7 | 4 | CH_mtr_314 | 3 | 5 | 0.000000253192 |
Punica granatum | NC_045128.1 | 4 | CH_pgr_190 | 3 | 5 | 0.00000295516 |
Punica granatum | NC_045131.1 | 4 | CH_pgr_201 | 3 | 6 | 0.00000590943 |
Pisum sativum | chr3LG5 | 4 | CH_psa_115 | 3 | 5 | 0.000000408112 |
Populus trichocarpa | Chr13 | 4 | CH_ptr_140 | 4 | 5 | 0.00000000289892 |
Populus trichocarpa | Chr01 | 4 | CH_ptr_156 | 4 | 6 | 0.0000000086945 |
Populus trichocarpa | Chr05 | 4 | CH_ptr_246 | 3 | 3 | 0.00000182416 |
Phaseolus vulgaris | Chr01 | 4 | CH_pvu_331 | 2 | 2 | 0.000440836 |
Quercus lobata | 3 | 4 | CH_qlo_456 | 3 | 3 | 0.000000223911 |
Salvia bowleyana | GWHASIU00000008 | 4 | CH_sbo_202 | 4 | 27 | 0.000000346376 |
Selenicereus undatus | Scaffold_33679 | 4 | CH_sun_161 | 2 | 2 | 0.000217992 |
Theobroma cacao | Chromosome_4 | 4 | CH_tca_141 | 3 | 3 | 0.0000000804614 |
Vaccinium macrocarpon | chr12_Vaccinium_macrocarpon_Stevens_v1 | 4 | CH_vma_349 | 2 | 2 | 0.000557543 |
Vitis vinifera | chr14 | 4 | CH_vvi_378 | 2 | 2 | 0.000456378 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:1904964 | positive regulation of phytol biosynthetic process | 12 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |