Functional clusters
Information
- Type Gene Ontology
- Description diterpene phytoalexin biosynthetic process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Coffea canephora | chr8 | 3 | CH_ccan_254 | 3 | 30 | 0.000122462 |
| Coffea canephora | chr0 | 3 | CH_ccan_296 | 3 | 33 | 0.000206721 |
| Citrus clementina | scaffold_8 | 3 | CH_ccl_38 | 10 | 77 | 4.48145e-16 |
| Daucus carota | DCARv2_Chr5 | 3 | CH_dca_98 | 4 | 6 | 0.0000000277663 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 3 | CH_eca_108 | 4 | 9 | 0.0000000465703 |
| Fragaria x ananassa | Fvb3-1 | 3 | CH_fan_211 | 3 | 3 | 0.00000168249 |
| Lotus japonicus | chr4 | 3 | CH_lja_213 | 3 | 6 | 0.000069725 |
| Tripterygium wilfordii | NC_052250.1 | 3 | CH_twi_3 | 17 | 33 | 1.77919e-36 |
| Coffea canephora | chr8 | 4 | CH_ccan_254 | 3 | 30 | 0.000122462 |
| Coffea canephora | chr0 | 4 | CH_ccan_296 | 3 | 33 | 0.000206721 |
| Citrus clementina | scaffold_8 | 4 | CH_ccl_38 | 10 | 77 | 4.48145e-16 |
| Daucus carota | DCARv2_Chr5 | 4 | CH_dca_98 | 4 | 6 | 0.0000000277663 |
| Erigeron canadensis | Conyza_canadensis_scaffold:4 | 4 | CH_eca_108 | 4 | 9 | 0.0000000465703 |
| Fragaria x ananassa | Fvb3-1 | 4 | CH_fan_211 | 3 | 3 | 0.00000168249 |
| Lotus japonicus | chr4 | 4 | CH_lja_213 | 3 | 6 | 0.000069725 |
| Tripterygium wilfordii | NC_052250.1 | 4 | CH_twi_3 | 17 | 33 | 1.77919e-36 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |