Functional clusters
Information
- Type Gene Ontology
- Description farnesyl diphosphate metabolic process
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Chenopodium quinoa | C_Quinoa_Scaffold_2939 | 3 | CH_cqu_57 | 7 | 39 | 0.000000000000272052 |
Chenopodium quinoa | C_Quinoa_Scaffold_1337 | 3 | CH_cqu_86 | 5 | 12 | 0.000000000184954 |
Punica granatum | NC_045129.1 | 3 | CH_pgr_187 | 3 | 4 | 0.00000283722 |
Chenopodium quinoa | C_Quinoa_Scaffold_2939 | 4 | CH_cqu_57 | 7 | 39 | 0.000000000000272052 |
Chenopodium quinoa | C_Quinoa_Scaffold_1337 | 4 | CH_cqu_86 | 5 | 12 | 0.000000000184954 |
Punica granatum | NC_045129.1 | 4 | CH_pgr_187 | 3 | 4 | 0.00000283722 |
Available child term results
Ontology identifier | Description | Number of clusters |
---|---|---|
GO:0010142 | farnesyl diphosphate biosynthetic process, mevalonate pathway | 12 |
GO:0045337 | farnesyl diphosphate biosynthetic process | 2 |
GO:0045339 | farnesyl diphosphate catabolic process | 14 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |